RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 CYSRT1A8MQ03 144 aa5.55□□□□□ -1.52
KPNA1-201ENST00000344337 SMCR5Q8TEV8 140 aa5.55□□□□□ -1.52
KPNA1-201ENST00000344337 PRO3102Q9H379 93 aa5.55□□□□□ -1.52
KPNA1-201ENST00000344337 J3QLI3 93 aa5.54□□□□□ -1.52
KPNA1-201ENST00000344337 IGLV1-40P01703 118 aa5.54□□□□□ -1.52
KPNA1-201ENST00000344337 NTM-AS1Q6ZSK4 140 aa5.54□□□□□ -1.52
KPNA1-201ENST00000344337 CMC4P56277 68 aaPredicted RBP5.54□□□□□ -1.52
KPNA1-201ENST00000344337 SMIM9A6NGZ8 99 aa5.54□□□□□ -1.52
KPNA1-201ENST00000344337 M0R2N4 97 aa5.54□□□□□ -1.52
KPNA1-201ENST00000344337 PYGO1Q9Y3Y4 419 aa5.53□□□□□ -1.52
KPNA1-201ENST00000344337 SPINK6Q6UWN8 80 aa5.53□□□□□ -1.52
KPNA1-201ENST00000344337 A0A087WZ39 114 aa5.53□□□□□ -1.52
KPNA1-201ENST00000344337 TRBV10-3A0A0K0K1G6 114 aa5.53□□□□□ -1.52
KPNA1-201ENST00000344337 CSDC2Q9Y534 153 aaKnown RBP5.53□□□□□ -1.52
KPNA1-201ENST00000344337 IBA57-AS1B1ANH7 110 aa5.52□□□□□ -1.53
KPNA1-201ENST00000344337 C9orf129Q5T035 196 aaKnown RBP5.52□□□□□ -1.53
KPNA1-201ENST00000344337 APCP25054 2843 aa5.52□□□□□ -1.53
KPNA1-201ENST00000344337 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
KPNA1-201ENST00000344337 AMELXQ99217 191 aa5.51□□□□□ -1.53
KPNA1-201ENST00000344337 BAHCC1Q9P281 2608 aa5.51□□□□□ -1.53
KPNA1-201ENST00000344337 NIPBLQ6KC79 2804 aaeCLIP5.51□□□□□ -1.53
KPNA1-201ENST00000344337 NHLRC4P0CG21 123 aaPredicted RBP5.51□□□□□ -1.53
KPNA1-201ENST00000344337 IGKV4-1P06312 121 aa5.51□□□□□ -1.53
KPNA1-201ENST00000344337 Q8N814 137 aa5.51□□□□□ -1.53
KPNA1-201ENST00000344337 UBE2AP49459 152 aa5.49□□□□□ -1.53
KPNA1-201ENST00000344337 RPL28P46779 137 aaKnown RBP5.49□□□□□ -1.53
KPNA1-201ENST00000344337 C9orf66Q5T8R8 295 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 A0A0G2JQZ4 141 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 A0A1W2PNN7 141 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 C10orf25Q5T742 122 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 LINC00575Q6W349 94 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 DEFB131BA0A096LNP1 70 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 TRBV6-4A0A1B0GX49 114 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
KPNA1-201ENST00000344337 KPRPQ5T749 579 aaPredicted RBP5.48□□□□□ -1.53
KPNA1-201ENST00000344337 TRAV10A0A0B4J240 114 aa5.47□□□□□ -1.53
KPNA1-201ENST00000344337 FHL2Q14192 279 aa5.47□□□□□ -1.53
KPNA1-201ENST00000344337 SETXQ7Z333 2677 aaKnown RBP5.47□□□□□ -1.53
KPNA1-201ENST00000344337 COX8CQ7Z4L0 72 aa5.47□□□□□ -1.53
KPNA1-201ENST00000344337 BEAN1Q3B7T3 259 aa5.47□□□□□ -1.53
KPNA1-201ENST00000344337 HELZ2Q9BYK8 2649 aaKnown RBP5.47□□□□□ -1.53
KPNA1-201ENST00000344337 PCOTHQ58A44 107 aa5.46□□□□□ -1.53
KPNA1-201ENST00000344337 NSD1Q96L73 2696 aaPredicted RBP5.46□□□□□ -1.54
KPNA1-201ENST00000344337 MP68P56378 58 aa5.46□□□□□ -1.54
KPNA1-201ENST00000344337 CD164L2Q6UWJ8 174 aa5.46□□□□□ -1.54
KPNA1-201ENST00000344337 MIFP14174 115 aa5.46□□□□□ -1.54
KPNA1-201ENST00000344337 COL4A2P08572 1712 aa5.46□□□□□ -1.54
KPNA1-201ENST00000344337 NDUFC2-KCTD14E9PQ53 114 aa5.46□□□□□ -1.54
KPNA1-201ENST00000344337 NDUFC2O95298 119 aa5.46□□□□□ -1.54
KPNA1-201ENST00000344337 ZNF73O43830 326 aaPredicted RBP5.45□□□□□ -1.54
KPNA1-201ENST00000344337 C11orf45Q8TAV5 145 aa5.45□□□□□ -1.54
KPNA1-201ENST00000344337 J3QKU1 62 aa5.45□□□□□ -1.54
KPNA1-201ENST00000344337 ZNF575Q86XF7 245 aa5.45□□□□□ -1.54
KPNA1-201ENST00000344337 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
KPNA1-201ENST00000344337 Q6ZVQ6 151 aa5.45□□□□□ -1.54
KPNA1-201ENST00000344337 FAM19A3Q7Z5A8 133 aa5.45□□□□□ -1.54
KPNA1-201ENST00000344337 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
KPNA1-201ENST00000344337 LINC01547P58512 204 aaPredicted RBP5.44□□□□□ -1.54
KPNA1-201ENST00000344337 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
KPNA1-201ENST00000344337 HRNRQ86YZ3 2850 aaPredicted RBP5.44□□□□□ -1.54
KPNA1-201ENST00000344337 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
KPNA1-201ENST00000344337 Q6ZTC4 211 aa5.44□□□□□ -1.54
KPNA1-201ENST00000344337 TM2D3Q9BRN9 247 aa5.44□□□□□ -1.54
KPNA1-201ENST00000344337 Q6JHZ5 121 aa5.44□□□□□ -1.54
KPNA1-201ENST00000344337 C11orf72Q8NBR9 251 aa5.44□□□□□ -1.54
KPNA1-201ENST00000344337 PRORYQ9H606 182 aa5.43□□□□□ -1.54
KPNA1-201ENST00000344337 C1orf195Q5TG92 126 aa5.43□□□□□ -1.54
KPNA1-201ENST00000344337 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
KPNA1-201ENST00000344337 LITAFQ99732 161 aa5.43□□□□□ -1.54
KPNA1-201ENST00000344337 A6NED7 52 aa5.43□□□□□ -1.54
KPNA1-201ENST00000344337 FAM19A4Q96LR4 140 aa5.43□□□□□ -1.54
KPNA1-201ENST00000344337 PRLHP81277 87 aa5.43□□□□□ -1.54
KPNA1-201ENST00000344337 ZNF469Q96JG9 3925 aaPredicted RBP5.42□□□□□ -1.54
KPNA1-201ENST00000344337 LY6G6DO95868 133 aa5.42□□□□□ -1.54
KPNA1-201ENST00000344337 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
KPNA1-201ENST00000344337 Q6ZRU5 148 aa5.41□□□□□ -1.54
KPNA1-201ENST00000344337 V9GYY9 64 aa5.41□□□□□ -1.54
KPNA1-201ENST00000344337 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.54
KPNA1-201ENST00000344337 LINC01546A6NGU7 62 aa5.4□□□□□ -1.54
KPNA1-201ENST00000344337 Q8IZM0 81 aa5.4□□□□□ -1.54
KPNA1-201ENST00000344337 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
KPNA1-201ENST00000344337 TRBV7-6A0A0J9YX20 115 aa5.4□□□□□ -1.55
KPNA1-201ENST00000344337 RPL37AP61513 92 aaKnown RBP5.4□□□□□ -1.55
KPNA1-201ENST00000344337 SMIM29Q86T20 159 aa5.4□□□□□ -1.55
KPNA1-201ENST00000344337 LINC01561Q8N1V8 128 aa5.4□□□□□ -1.55
KPNA1-201ENST00000344337 STAB1Q9NY15 2570 aa5.39□□□□□ -1.55
KPNA1-201ENST00000344337 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
KPNA1-201ENST00000344337 TRBV7-7A0A0K0K1E9 115 aa5.39□□□□□ -1.55
KPNA1-201ENST00000344337 C1orf137Q5JT78 98 aa5.39□□□□□ -1.55
KPNA1-201ENST00000344337 MUC7Q8TAX7 377 aa5.39□□□□□ -1.55
KPNA1-201ENST00000344337 A0A087WSZ3 146 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 NDUFB1O75438 58 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 SPATA3Q8NHX4 192 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 ITPR2Q14571 2701 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 IGSF10Q6WRI0 2623 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 SBSPONQ8IVN8 264 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 CYSTM1Q9H1C7 97 aa5.38□□□□□ -1.55
KPNA1-201ENST00000344337 ST20-AS1Q8NBB2 130 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms