RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 SOSTDC1Q6X4U4 206 aa10.2□□□□□ -0.78
PBX3-201ENST00000342287 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.19□□□□□ -0.78
PBX3-201ENST00000342287 IGKV2-29A2NJV5 120 aaPredicted RBP10.19□□□□□ -0.78
PBX3-201ENST00000342287 PRO0255Q9UI72 69 aa10.19□□□□□ -0.78
PBX3-201ENST00000342287 CMYA5Q8N3K9 4069 aa10.19□□□□□ -0.78
PBX3-201ENST00000342287 COPS9Q8WXC6 57 aa10.18□□□□□ -0.78
PBX3-201ENST00000342287 S100A7L2Q5SY68 101 aa10.18□□□□□ -0.78
PBX3-201ENST00000342287 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
PBX3-201ENST00000342287 CELA1Q9UNI1 258 aa10.18□□□□□ -0.78
PBX3-201ENST00000342287 GYPEP15421 78 aa10.15□□□□□ -0.78
PBX3-201ENST00000342287 FAM104AQ969W3 186 aa10.15□□□□□ -0.78
PBX3-201ENST00000342287 A0A087WYN8 130 aa10.15□□□□□ -0.78
PBX3-201ENST00000342287 PAX4O43316 350 aa10.15□□□□□ -0.78
PBX3-201ENST00000342287 DGAT2L7PQ6IED9 249 aa10.14□□□□□ -0.79
PBX3-201ENST00000342287 ANK2Q01484 3957 aa10.14□□□□□ -0.79
PBX3-201ENST00000342287 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
PBX3-201ENST00000342287 Q9H8V8 135 aa10.14□□□□□ -0.79
PBX3-201ENST00000342287 TRAV7A0A075B6U4 112 aa10.13□□□□□ -0.79
PBX3-201ENST00000342287 KLKP1Q107X0 134 aa10.13□□□□□ -0.79
PBX3-201ENST00000342287 PRB2P02812 416 aaPredicted RBP10.13□□□□□ -0.79
PBX3-201ENST00000342287 KPRPQ5T749 579 aaPredicted RBP10.13□□□□□ -0.79
PBX3-201ENST00000342287 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
PBX3-201ENST00000342287 UBE2L6O14933 153 aa10.12□□□□□ -0.79
PBX3-201ENST00000342287 ZNF561-AS1K7EIQ3 104 aa10.12□□□□□ -0.79
PBX3-201ENST00000342287 CD164Q04900 197 aa10.12□□□□□ -0.79
PBX3-201ENST00000342287 SLPIP03973 132 aa10.11□□□□□ -0.79
PBX3-201ENST00000342287 C11orf68Q9H3H3 251 aaKnown RBP10.11□□□□□ -0.79
PBX3-201ENST00000342287 NDUFA1O15239 70 aa10.11□□□□□ -0.79
PBX3-201ENST00000342287 K7EIL1 84 aa10.1□□□□□ -0.79
PBX3-201ENST00000342287 CDKN2A-AS1Q9UH64 79 aa10.1□□□□□ -0.79
PBX3-201ENST00000342287 DNAH3Q8TD57 4116 aa10.1□□□□□ -0.79
PBX3-201ENST00000342287 HTN3P15516 51 aa10.09□□□□□ -0.79
PBX3-201ENST00000342287 LECT2O14960 151 aa10.09□□□□□ -0.79
PBX3-201ENST00000342287 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
PBX3-201ENST00000342287 OBSCN-AS1Q96MR7 158 aa10.09□□□□□ -0.79
PBX3-201ENST00000342287 ATP5EP2Q5VTU8 51 aa10.08□□□□□ -0.8
PBX3-201ENST00000342287 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
PBX3-201ENST00000342287 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
PBX3-201ENST00000342287 PRR15Q8IV56 129 aa10.07□□□□□ -0.8
PBX3-201ENST00000342287 A0A096LPF7 62 aa10.07□□□□□ -0.8
PBX3-201ENST00000342287 TRAV10A0A0B4J240 114 aa10.06□□□□□ -0.8
PBX3-201ENST00000342287 A0A0J9YWU9 116 aa10.06□□□□□ -0.8
PBX3-201ENST00000342287 CRPP02741 224 aa10.06□□□□□ -0.8
PBX3-201ENST00000342287 A0A087WZ39 114 aa10.05□□□□□ -0.8
PBX3-201ENST00000342287 Q6ZRU5 148 aa10.05□□□□□ -0.8
PBX3-201ENST00000342287 TM2D3Q9BRN9 247 aa10.05□□□□□ -0.8
PBX3-201ENST00000342287 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
PBX3-201ENST00000342287 UBL5Q9BZL1 73 aa10.04□□□□□ -0.8
PBX3-201ENST00000342287 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
PBX3-201ENST00000342287 NBEAL1Q6ZS30 2694 aa10.03□□□□□ -0.8
PBX3-201ENST00000342287 C4orf48Q5BLP8 95 aa10.03□□□□□ -0.8
PBX3-201ENST00000342287 Q6ZTC4 211 aa10.03□□□□□ -0.8
PBX3-201ENST00000342287 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
PBX3-201ENST00000342287 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
PBX3-201ENST00000342287 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
PBX3-201ENST00000342287 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.8
PBX3-201ENST00000342287 H3BNG1 76 aa10.02□□□□□ -0.81
PBX3-201ENST00000342287 IGLV4-60A0A075B6I1 120 aa10.01□□□□□ -0.81
PBX3-201ENST00000342287 LINC00242Q5T6M2 205 aa10.01□□□□□ -0.81
PBX3-201ENST00000342287 ORMDL1Q9P0S3 153 aa10.01□□□□□ -0.81
PBX3-201ENST00000342287 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
PBX3-201ENST00000342287 NDUFC1O43677 76 aa10.01□□□□□ -0.81
PBX3-201ENST00000342287 ATP5EP56381 51 aaPredicted RBP10.01□□□□□ -0.81
PBX3-201ENST00000342287 MRPL55Q7Z7F7 128 aaKnown RBP10.01□□□□□ -0.81
PBX3-201ENST00000342287 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
PBX3-201ENST00000342287 COX6A2Q02221 97 aa10□□□□□ -0.81
PBX3-201ENST00000342287 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
PBX3-201ENST00000342287 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
PBX3-201ENST00000342287 H0YGX0 51 aa9.98□□□□□ -0.81
PBX3-201ENST00000342287 HAMPP81172 84 aa9.98□□□□□ -0.81
PBX3-201ENST00000342287 C6orf223Q8N319 242 aa9.98□□□□□ -0.81
PBX3-201ENST00000342287 LELP1Q5T871 98 aa9.98□□□□□ -0.81
PBX3-201ENST00000342287 ESRGQ1W209 222 aa9.97□□□□□ -0.81
PBX3-201ENST00000342287 DEFB131BA0A096LNP1 70 aa9.97□□□□□ -0.81
PBX3-201ENST00000342287 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
PBX3-201ENST00000342287 BCE1O60756 84 aa9.97□□□□□ -0.81
PBX3-201ENST00000342287 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
PBX3-201ENST00000342287 SND1-IT1Q9HBX3 110 aa9.97□□□□□ -0.81
PBX3-201ENST00000342287 IGKV3OR2-268A0A0C4DH90 116 aa9.96□□□□□ -0.82
PBX3-201ENST00000342287 IBA57-AS1B1ANH7 110 aa9.96□□□□□ -0.82
PBX3-201ENST00000342287 TENM3Q9P273 2699 aa9.96□□□□□ -0.82
PBX3-201ENST00000342287 LRCOL1A6NCL2 159 aa9.95□□□□□ -0.82
PBX3-201ENST00000342287 LAMTOR3Q9UHA4 124 aa9.95□□□□□ -0.82
PBX3-201ENST00000342287 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
PBX3-201ENST00000342287 LINC00959A0A1B0GUT2 108 aa9.93□□□□□ -0.82
PBX3-201ENST00000342287 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
PBX3-201ENST00000342287 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
PBX3-201ENST00000342287 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
PBX3-201ENST00000342287 Q8N3U1 123 aa9.92□□□□□ -0.82
PBX3-201ENST00000342287 TRBV7-4A0A0J9YYF1 115 aa9.92□□□□□ -0.82
PBX3-201ENST00000342287 ANGP03950 147 aaKnown RBP9.91□□□□□ -0.82
PBX3-201ENST00000342287 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
PBX3-201ENST00000342287 TMEM254Q8TBM7 123 aa9.91□□□□□ -0.82
PBX3-201ENST00000342287 B9D2Q9BPU9 175 aa9.91□□□□□ -0.82
PBX3-201ENST00000342287 RBM12B-AS1Q9P1G2 102 aa9.91□□□□□ -0.82
PBX3-201ENST00000342287 IGHV3OR16-9A0A0B4J2B5 98 aa9.9□□□□□ -0.82
PBX3-201ENST00000342287 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
PBX3-201ENST00000342287 PSPHP1O15172 72 aa9.89□□□□□ -0.83
PBX3-201ENST00000342287 FUSP35637 526 aaKnown RBP eCLIP9.89□□□□□ -0.83
PBX3-201ENST00000342287 REG3AQ06141 175 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms