RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 Q6ZVQ6 151 aa13.31□□□□□ -0.28
CDK13-202ENST00000340829 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
CDK13-202ENST00000340829 PRYO14603 147 aa13.3□□□□□ -0.28
CDK13-202ENST00000340829 LINC01556Q5JQF7 62 aa13.29□□□□□ -0.28
CDK13-202ENST00000340829 A0A096LNT2 108 aa13.28□□□□□ -0.28
CDK13-202ENST00000340829 SBSPONQ8IVN8 264 aa13.28□□□□□ -0.28
CDK13-202ENST00000340829 LITAFQ99732 161 aa13.27□□□□□ -0.28
CDK13-202ENST00000340829 ATP5EP56381 51 aaPredicted RBP13.27□□□□□ -0.29
CDK13-202ENST00000340829 PRLHP81277 87 aa13.27□□□□□ -0.29
CDK13-202ENST00000340829 Q9BRP9 147 aa13.27□□□□□ -0.29
CDK13-202ENST00000340829 C22orf24Q9Y442 160 aa13.27□□□□□ -0.29
CDK13-202ENST00000340829 Q8NAQ8 132 aa13.26□□□□□ -0.29
CDK13-202ENST00000340829 A0A087WSZ3 146 aa13.25□□□□□ -0.29
CDK13-202ENST00000340829 KRTAP24-1Q3LI83 254 aa13.24□□□□□ -0.29
CDK13-202ENST00000340829 LINC01547P58512 204 aaPredicted RBP13.24□□□□□ -0.29
CDK13-202ENST00000340829 DEFB116Q30KQ4 102 aa13.24□□□□□ -0.29
CDK13-202ENST00000340829 CENPEQ02224 2701 aa13.24□□□□□ -0.29
CDK13-202ENST00000340829 TRBV7-7A0A0K0K1E9 115 aa13.23□□□□□ -0.29
CDK13-202ENST00000340829 IGLV5-52A0A0A0MRZ9 124 aa13.22□□□□□ -0.29
CDK13-202ENST00000340829 MGAQ8IWI9 3026 aa13.2□□□□□ -0.3
CDK13-202ENST00000340829 Q8N9L7 120 aa13.19□□□□□ -0.3
CDK13-202ENST00000340829 LINC00208Q96KT6 92 aa13.19□□□□□ -0.3
CDK13-202ENST00000340829 CSNK1G2-AS1Q8NCQ2 148 aa13.19□□□□□ -0.3
CDK13-202ENST00000340829 A0A0U1RQV1 116 aa13.19□□□□□ -0.3
CDK13-202ENST00000340829 KIAA0087Q14695 138 aa13.19□□□□□ -0.3
CDK13-202ENST00000340829 H3BNG1 76 aa13.18□□□□□ -0.3
CDK13-202ENST00000340829 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
CDK13-202ENST00000340829 CIRBP-AS1Q8TBR5 109 aa13.18□□□□□ -0.3
CDK13-202ENST00000340829 LINC00167Q96N53 147 aa13.17□□□□□ -0.3
CDK13-202ENST00000340829 SMCR5Q8TEV8 140 aa13.16□□□□□ -0.3
CDK13-202ENST00000340829 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
CDK13-202ENST00000340829 EIF4EBP3O60516 100 aaPredicted RBP13.15□□□□□ -0.3
CDK13-202ENST00000340829 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
CDK13-202ENST00000340829 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.31
CDK13-202ENST00000340829 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
CDK13-202ENST00000340829 IGHV6-1A0A0B4J1U7 121 aa13.14□□□□□ -0.31
CDK13-202ENST00000340829 CDH23Q9H251 3354 aa13.13□□□□□ -0.31
CDK13-202ENST00000340829 C1orf134Q5TEV5 83 aa13.12□□□□□ -0.31
CDK13-202ENST00000340829 GIG44P09565 113 aaPredicted RBP13.12□□□□□ -0.31
CDK13-202ENST00000340829 ELOF1P60002 83 aaKnown RBP13.11□□□□□ -0.31
CDK13-202ENST00000340829 CXCL6P80162 114 aa13.1□□□□□ -0.31
CDK13-202ENST00000340829 MDFIQ99750 246 aa13.1□□□□□ -0.31
CDK13-202ENST00000340829 TMEM254Q8TBM7 123 aa13.09□□□□□ -0.31
CDK13-202ENST00000340829 TRIOO75962 3097 aa13.09□□□□□ -0.31
CDK13-202ENST00000340829 SMIM26A0A096LP01 95 aa13.09□□□□□ -0.31
CDK13-202ENST00000340829 SERP1Q9Y6X1 66 aa13.09□□□□□ -0.31
CDK13-202ENST00000340829 C19orf73Q9NVV2 129 aa13.08□□□□□ -0.32
CDK13-202ENST00000340829 ZNF292O60281 2723 aa13.08□□□□□ -0.32
CDK13-202ENST00000340829 V9GYY9 64 aa13.08□□□□□ -0.32
CDK13-202ENST00000340829 LINC00588Q9Y4M8 146 aa13.08□□□□□ -0.32
CDK13-202ENST00000340829 K7ERS5 55 aa13.07□□□□□ -0.32
CDK13-202ENST00000340829 A6NED7 52 aa13.07□□□□□ -0.32
CDK13-202ENST00000340829 NHLRC4P0CG21 123 aaPredicted RBP13.07□□□□□ -0.32
CDK13-202ENST00000340829 MGAM2Q2M2H8 2515 aa13.06□□□□□ -0.32
CDK13-202ENST00000340829 ITPR3Q14573 2671 aa13.06□□□□□ -0.32
CDK13-202ENST00000340829 HCG22E2RYF7 251 aa13.05□□□□□ -0.32
CDK13-202ENST00000340829 Q6ZQT0 140 aa13.05□□□□□ -0.32
CDK13-202ENST00000340829 TRBV7-6A0A0J9YX20 115 aa13.04□□□□□ -0.32
CDK13-202ENST00000340829 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
CDK13-202ENST00000340829 PRR15LQ9BU68 103 aa13.04□□□□□ -0.32
CDK13-202ENST00000340829 Q6ZRP5 223 aa13.02□□□□□ -0.32
CDK13-202ENST00000340829 PCOTHQ58A44 107 aa13.01□□□□□ -0.33
CDK13-202ENST00000340829 ZNF575Q86XF7 245 aa13.01□□□□□ -0.33
CDK13-202ENST00000340829 Q6ZRX8 168 aa13.01□□□□□ -0.33
CDK13-202ENST00000340829 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
CDK13-202ENST00000340829 H0Y9P7 68 aa13□□□□□ -0.33
CDK13-202ENST00000340829 SMIM29Q86T20 159 aa13□□□□□ -0.33
CDK13-202ENST00000340829 KRTAP1-3Q8IUG1 177 aa13□□□□□ -0.33
CDK13-202ENST00000340829 ST20-AS1Q8NBB2 130 aa12.99□□□□□ -0.33
CDK13-202ENST00000340829 VPREB1P12018 145 aa12.98□□□□□ -0.33
CDK13-202ENST00000340829 PHF5AQ7RTV0 110 aaKnown RBP12.98□□□□□ -0.33
CDK13-202ENST00000340829 RETNLBQ9BQ08 111 aa12.98□□□□□ -0.33
CDK13-202ENST00000340829 LOC110117498A0A087WWA1 95 aa12.97□□□□□ -0.33
CDK13-202ENST00000340829 CFAP46Q8IYW2 2715 aa12.97□□□□□ -0.33
CDK13-202ENST00000340829 IGLV6-57P01721 117 aa12.97□□□□□ -0.33
CDK13-202ENST00000340829 KRTAP10-11P60412 298 aa12.96□□□□□ -0.34
CDK13-202ENST00000340829 VPS13AQ96RL7 3174 aa12.95□□□□□ -0.34
CDK13-202ENST00000340829 ATRQ13535 2644 aa12.95□□□□□ -0.34
CDK13-202ENST00000340829 DNAH10OSP0CZ25 163 aa12.95□□□□□ -0.34
CDK13-202ENST00000340829 FAM168BA1KXE4 195 aa12.93□□□□□ -0.34
CDK13-202ENST00000340829 CRYGAP11844 174 aa12.93□□□□□ -0.34
CDK13-202ENST00000340829 LINC00476Q8WZB0 136 aa12.93□□□□□ -0.34
CDK13-202ENST00000340829 HELZ2Q9BYK8 2649 aaKnown RBP12.93□□□□□ -0.34
CDK13-202ENST00000340829 Q8NBF4 154 aa12.92□□□□□ -0.34
CDK13-202ENST00000340829 CHTF8P0CG12 524 aa12.92□□□□□ -0.34
CDK13-202ENST00000340829 LINC00612Q8N6U2 182 aa12.92□□□□□ -0.34
CDK13-202ENST00000340829 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
CDK13-202ENST00000340829 C16orf90A8MZG2 172 aa12.91□□□□□ -0.34
CDK13-202ENST00000340829 PRR34Q9NV39 138 aa12.91□□□□□ -0.34
CDK13-202ENST00000340829 SERTAD4-AS1Q5TG53 156 aa12.9□□□□□ -0.34
CDK13-202ENST00000340829 MOBPQ13875 183 aa12.9□□□□□ -0.35
CDK13-202ENST00000340829 EPM2AB3EWF7 344 aa12.89□□□□□ -0.35
CDK13-202ENST00000340829 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
CDK13-202ENST00000340829 MAST4O15021 2626 aa12.88□□□□□ -0.35
CDK13-202ENST00000340829 AKAP13Q12802 2813 aa12.88□□□□□ -0.35
CDK13-202ENST00000340829 C1orf64Q8NEQ6 169 aa12.86□□□□□ -0.35
CDK13-202ENST00000340829 PSPHP1O15172 72 aa12.85□□□□□ -0.35
CDK13-202ENST00000340829 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
CDK13-202ENST00000340829 A0A1B0GW54 56 aa12.84□□□□□ -0.35
CDK13-202ENST00000340829 SZT2Q5T011 3432 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms