RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
PBX1-201ENST00000340699 ATP6V1G1O75348 118 aa13.67□□□□□ -0.22
PBX1-201ENST00000340699 DPM2O94777 84 aa13.67□□□□□ -0.22
PBX1-201ENST00000340699 HERV-K104P63124 156 aa13.66□□□□□ -0.22
PBX1-201ENST00000340699 MEIG1Q5JSS6 88 aa13.66□□□□□ -0.22
PBX1-201ENST00000340699 A0A0U1RRA0 63 aa13.65□□□□□ -0.22
PBX1-201ENST00000340699 ZNF861PO60384 105 aa13.65□□□□□ -0.22
PBX1-201ENST00000340699 IGKCP01834 107 aa13.65□□□□□ -0.22
PBX1-201ENST00000340699 KRTAP10-8P60410 259 aa13.65□□□□□ -0.22
PBX1-201ENST00000340699 HERVK_113P61574 105 aa13.65□□□□□ -0.22
PBX1-201ENST00000340699 PMCHL2Q9BQD1 86 aa13.65□□□□□ -0.22
PBX1-201ENST00000340699 NDUFA12Q9UI09 145 aa13.65□□□□□ -0.22
PBX1-201ENST00000340699 MYMXA0A1B0GTQ4 84 aa13.64□□□□□ -0.23
PBX1-201ENST00000340699 LINC00587B1AMM8 73 aa13.64□□□□□ -0.23
PBX1-201ENST00000340699 LEPROTO15243 131 aa13.64□□□□□ -0.23
PBX1-201ENST00000340699 PLEKHB2Q96CS7 222 aa13.64□□□□□ -0.23
PBX1-201ENST00000340699 BCE1O60756 84 aa13.63□□□□□ -0.23
PBX1-201ENST00000340699 VPREB1P12018 145 aa13.63□□□□□ -0.23
PBX1-201ENST00000340699 SMIM13P0DJ93 91 aa13.62□□□□□ -0.23
PBX1-201ENST00000340699 RPL28P46779 137 aaKnown RBP13.61□□□□□ -0.23
PBX1-201ENST00000340699 IGKV2-28A0A075B6P5 120 aa13.59□□□□□ -0.23
PBX1-201ENST00000340699 IGKV2D-28P01615 120 aa13.59□□□□□ -0.23
PBX1-201ENST00000340699 SYS1-DBNDD2H3BUS1 97 aa13.58□□□□□ -0.24
PBX1-201ENST00000340699 J3QQQ9 107 aa13.58□□□□□ -0.24
PBX1-201ENST00000340699 IGLV1-50A0A075B6I6 118 aa13.57□□□□□ -0.24
PBX1-201ENST00000340699 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
PBX1-201ENST00000340699 TSPEAR-AS2P59090 65 aa13.57□□□□□ -0.24
PBX1-201ENST00000340699 MIR7-3HGQ8N6C7 128 aa13.57□□□□□ -0.24
PBX1-201ENST00000340699 NMUP48645 174 aa13.56□□□□□ -0.24
PBX1-201ENST00000340699 UBE2AP49459 152 aa13.55□□□□□ -0.24
PBX1-201ENST00000340699 PRR26Q8N8Z3 221 aa13.55□□□□□ -0.24
PBX1-201ENST00000340699 TNXBP22105 4242 aa13.54□□□□□ -0.24
PBX1-201ENST00000340699 Q8NDZ9 215 aa13.54□□□□□ -0.24
PBX1-201ENST00000340699 COA6Q5JTJ3 125 aaKnown RBP13.53□□□□□ -0.24
PBX1-201ENST00000340699 PET117Q6UWS5 81 aa13.53□□□□□ -0.24
PBX1-201ENST00000340699 BOD1L2Q8IYS8 172 aa13.53□□□□□ -0.24
PBX1-201ENST00000340699 M0R378 163 aa13.52□□□□□ -0.25
PBX1-201ENST00000340699 KRTAP1-4P0C5Y4 121 aa13.52□□□□□ -0.25
PBX1-201ENST00000340699 S100A1P23297 94 aa13.52□□□□□ -0.25
PBX1-201ENST00000340699 TMEM126AQ9H061 195 aa13.51□□□□□ -0.25
PBX1-201ENST00000340699 E9PLD3 99 aa13.5□□□□□ -0.25
PBX1-201ENST00000340699 LINC01545Q5VT33 79 aa13.5□□□□□ -0.25
PBX1-201ENST00000340699 TMEM238C9JI98 176 aa13.49□□□□□ -0.25
PBX1-201ENST00000340699 FAM19A1Q7Z5A9 133 aa13.49□□□□□ -0.25
PBX1-201ENST00000340699 RPL13AP40429 203 aaKnown RBP13.48□□□□□ -0.25
PBX1-201ENST00000340699 C3orf79P0CE67 100 aa13.47□□□□□ -0.25
PBX1-201ENST00000340699 IGKV2D-26A0A0A0MRZ7 120 aa13.46□□□□□ -0.25
PBX1-201ENST00000340699 NCR3O14931 201 aa13.46□□□□□ -0.25
PBX1-201ENST00000340699 KRTDAPP60985 99 aa13.46□□□□□ -0.25
PBX1-201ENST00000340699 KRTAP13-1Q8IUC0 172 aa13.46□□□□□ -0.25
PBX1-201ENST00000340699 DAND5Q8N907 189 aa13.46□□□□□ -0.25
PBX1-201ENST00000340699 MIEN1Q9BRT3 115 aa13.45□□□□□ -0.26
PBX1-201ENST00000340699 PRLHP81277 87 aa13.44□□□□□ -0.26
PBX1-201ENST00000340699 HMCN2Q8NDA2 5059 aa13.44□□□□□ -0.26
PBX1-201ENST00000340699 LOC107984156A0A0G2JMH3 177 aa13.43□□□□□ -0.26
PBX1-201ENST00000340699 ARL17AQ8IVW1 177 aa13.43□□□□□ -0.26
PBX1-201ENST00000340699 A0A0J9YXY3 114 aa13.42□□□□□ -0.26
PBX1-201ENST00000340699 C20orf202A1L168 122 aa13.41□□□□□ -0.26
PBX1-201ENST00000340699 S100A12P80511 92 aa13.41□□□□□ -0.26
PBX1-201ENST00000340699 PRYO14603 147 aa13.4□□□□□ -0.26
PBX1-201ENST00000340699 CRYGAP11844 174 aa13.39□□□□□ -0.27
PBX1-201ENST00000340699 KCNQ1DNQ9H478 68 aa13.38□□□□□ -0.27
PBX1-201ENST00000340699 TRBV10-2A0A0K0K1G8 114 aa13.37□□□□□ -0.27
PBX1-201ENST00000340699 TRBV10-3A0A0K0K1G6 114 aa13.36□□□□□ -0.27
PBX1-201ENST00000340699 HIGD2AQ9BW72 106 aa13.36□□□□□ -0.27
PBX1-201ENST00000340699 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
PBX1-201ENST00000340699 ZNF815PA8K554 130 aa13.35□□□□□ -0.27
PBX1-201ENST00000340699 NDUFC2O95298 119 aa13.35□□□□□ -0.27
PBX1-201ENST00000340699 NPC2P61916 151 aa13.35□□□□□ -0.27
PBX1-201ENST00000340699 ADAMTSL4-AS1Q5T5F5 129 aa13.35□□□□□ -0.27
PBX1-201ENST00000340699 A0A087X002 238 aa13.34□□□□□ -0.27
PBX1-201ENST00000340699 DDTP30046 118 aa13.34□□□□□ -0.27
PBX1-201ENST00000340699 AKR1D1P51857 326 aa13.34□□□□□ -0.27
PBX1-201ENST00000340699 ANAPC11Q9NYG5 84 aa13.34□□□□□ -0.27
PBX1-201ENST00000340699 ETDCA0A1B0GVM5 59 aa13.33□□□□□ -0.28
PBX1-201ENST00000340699 S100A7L2Q5SY68 101 aa13.33□□□□□ -0.28
PBX1-201ENST00000340699 LINC00337Q8N6G1 96 aa13.33□□□□□ -0.28
PBX1-201ENST00000340699 TYMSOSQ8TAI1 123 aa13.33□□□□□ -0.28
PBX1-201ENST00000340699 TIMM17BO60830 172 aa13.32□□□□□ -0.28
PBX1-201ENST00000340699 S100A2P29034 98 aa13.32□□□□□ -0.28
PBX1-201ENST00000340699 SPRR1AP35321 89 aa13.32□□□□□ -0.28
PBX1-201ENST00000340699 FAM229BQ4G0N7 80 aa13.32□□□□□ -0.28
PBX1-201ENST00000340699 SOSTDC1Q6X4U4 206 aa13.31□□□□□ -0.28
PBX1-201ENST00000340699 S100A6P06703 90 aa13.29□□□□□ -0.28
PBX1-201ENST00000340699 TTTY13Q9BZ97 58 aa13.29□□□□□ -0.28
PBX1-201ENST00000340699 ATOH7Q8N100 152 aa13.28□□□□□ -0.28
PBX1-201ENST00000340699 HIST3H2BBQ8N257 126 aa13.28□□□□□ -0.28
PBX1-201ENST00000340699 LITAFQ99732 161 aa13.28□□□□□ -0.28
PBX1-201ENST00000340699 LINC00308Q8TCZ7 52 aa13.27□□□□□ -0.29
PBX1-201ENST00000340699 ZNF706Q9Y5V0 76 aaPredicted RBP13.27□□□□□ -0.29
PBX1-201ENST00000340699 KRTAP4-16G5E9R7 235 aaPredicted RBP13.26□□□□□ -0.29
PBX1-201ENST00000340699 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
PBX1-201ENST00000340699 SCGB1D4Q6XE38 83 aa13.26□□□□□ -0.29
PBX1-201ENST00000340699 IGLV6-57P01721 117 aa13.25□□□□□ -0.29
PBX1-201ENST00000340699 ANKRD39Q53RE8 183 aa13.25□□□□□ -0.29
PBX1-201ENST00000340699 HIST1H2BLQ99880 126 aa13.25□□□□□ -0.29
PBX1-201ENST00000340699 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
PBX1-201ENST00000340699 KRTAP13-2Q52LG2 175 aa13.24□□□□□ -0.29
PBX1-201ENST00000340699 SMCR5Q8TEV8 140 aa13.24□□□□□ -0.29
PBX1-201ENST00000340699 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms