RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FAM19A3Q7Z5A8 133 aa8.68□□□□□ -1.02
LIN54-201ENST00000340417 SCXQ7RTU7 201 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
LIN54-201ENST00000340417 CRYGAP11844 174 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 MUC4Q99102 2169 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 TYMSOSQ8TAI1 123 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
LIN54-201ENST00000340417 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
LIN54-201ENST00000340417 Q8N814 137 aa8.65□□□□□ -1.02
LIN54-201ENST00000340417 FAM236DA0A1B0GTK5 79 aa8.65□□□□□ -1.02
LIN54-201ENST00000340417 FAM236CP0DP71 79 aa8.65□□□□□ -1.02
LIN54-201ENST00000340417 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.03
LIN54-201ENST00000340417 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
LIN54-201ENST00000340417 TNRC18O15417 2968 aaPredicted RBP8.63□□□□□ -1.03
LIN54-201ENST00000340417 WFDC2Q14508 124 aa8.63□□□□□ -1.03
LIN54-201ENST00000340417 DSPP15924 2871 aaKnown RBP8.62□□□□□ -1.03
LIN54-201ENST00000340417 A0A087WYN8 130 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 TAX1BP3O14907 124 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 WIPF1O43516 503 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 MOBPQ13875 183 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 CDH23Q9H251 3354 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 PCP4P48539 62 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 PRR4Q16378 134 aa8.6□□□□□ -1.03
LIN54-201ENST00000340417 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
LIN54-201ENST00000340417 IGLV5-39A0A0G2JS06 123 aa8.59□□□□□ -1.03
LIN54-201ENST00000340417 EPM2AB3EWF7 344 aa8.59□□□□□ -1.03
LIN54-201ENST00000340417 A0A096LNJ9 63 aa8.58□□□□□ -1.04
LIN54-201ENST00000340417 UNC79Q9P2D8 2635 aa8.58□□□□□ -1.04
LIN54-201ENST00000340417 BCE1O60756 84 aa8.57□□□□□ -1.04
LIN54-201ENST00000340417 SEC61GP60059 68 aa8.57□□□□□ -1.04
LIN54-201ENST00000340417 WDFY4Q6ZS81 3184 aa8.57□□□□□ -1.04
LIN54-201ENST00000340417 BPTFQ12830 3046 aa8.56□□□□□ -1.04
LIN54-201ENST00000340417 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 A0A087WSZ3 146 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 TNP2Q05952 138 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 ZNF575Q86XF7 245 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 CHD6Q8TD26 2715 aa8.54□□□□□ -1.04
LIN54-201ENST00000340417 SZT2Q5T011 3432 aa8.54□□□□□ -1.04
LIN54-201ENST00000340417 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
LIN54-201ENST00000340417 LINC00310P59036 64 aa8.53□□□□□ -1.04
LIN54-201ENST00000340417 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
LIN54-201ENST00000340417 C2orf91Q6ZV80 131 aa8.52□□□□□ -1.04
LIN54-201ENST00000340417 LINC00575Q6W349 94 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 IGLV5-45A0A087WSX0 123 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 C9orf163Q8N9P6 203 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 LINC00643Q86TS7 51 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 Q8NBF4 154 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 GCN1Q92616 2671 aaKnown RBP8.5□□□□□ -1.05
LIN54-201ENST00000340417 Q6Q795 121 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 XIRP2A4UGR9 3374 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 ATOX1O00244 68 aa8.49□□□□□ -1.05
LIN54-201ENST00000340417 ATP5EP2Q5VTU8 51 aa8.49□□□□□ -1.05
LIN54-201ENST00000340417 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 LAMA2P24043 3122 aaKnown RBP8.48□□□□□ -1.05
LIN54-201ENST00000340417 LCE6AA0A183 80 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 Q6ZVQ6 151 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 J3KT08 172 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 KIAA0087Q14695 138 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 COL6A5A8TX70 2615 aa8.47□□□□□ -1.05
LIN54-201ENST00000340417 DEFB116Q30KQ4 102 aa8.46□□□□□ -1.05
LIN54-201ENST00000340417 Q6ZRX8 168 aa8.46□□□□□ -1.05
LIN54-201ENST00000340417 COL6A3P12111 3177 aa8.45□□□□□ -1.06
LIN54-201ENST00000340417 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
LIN54-201ENST00000340417 TEX15Q9BXT5 2789 aa8.45□□□□□ -1.06
LIN54-201ENST00000340417 SERTAD4-AS1Q5TG53 156 aa8.44□□□□□ -1.06
LIN54-201ENST00000340417 TRIOO75962 3097 aa8.44□□□□□ -1.06
LIN54-201ENST00000340417 CDIP1Q9H305 208 aa8.43□□□□□ -1.06
LIN54-201ENST00000340417 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
LIN54-201ENST00000340417 STAB1Q9NY15 2570 aa8.42□□□□□ -1.06
LIN54-201ENST00000340417 ZNF861PO60384 105 aa8.42□□□□□ -1.06
LIN54-201ENST00000340417 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
LIN54-201ENST00000340417 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
LIN54-201ENST00000340417 CFAP54Q96N23 3096 aa8.4□□□□□ -1.06
LIN54-201ENST00000340417 VPREB1P12018 145 aa8.4□□□□□ -1.06
LIN54-201ENST00000340417 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.06
LIN54-201ENST00000340417 B5MCH6 92 aa8.4□□□□□ -1.07
LIN54-201ENST00000340417 ST20-AS1Q8NBB2 130 aa8.39□□□□□ -1.07
LIN54-201ENST00000340417 C3orf22Q8N5N4 141 aa8.39□□□□□ -1.07
LIN54-201ENST00000340417 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
LIN54-201ENST00000340417 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
LIN54-201ENST00000340417 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
LIN54-201ENST00000340417 C5orf47Q569G3 176 aa8.37□□□□□ -1.07
LIN54-201ENST00000340417 ATP11AUNQ6ZP68 121 aa8.37□□□□□ -1.07
LIN54-201ENST00000340417 LINC01547P58512 204 aaPredicted RBP8.36□□□□□ -1.07
LIN54-201ENST00000340417 Q8N9L7 120 aa8.36□□□□□ -1.07
LIN54-201ENST00000340417 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
LIN54-201ENST00000340417 PSORS1C2Q9UIG4 136 aa8.36□□□□□ -1.07
LIN54-201ENST00000340417 TMEM258P61165 79 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms