RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
SDCBP2-201ENST00000339987 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
SDCBP2-201ENST00000339987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.4□□□□□ -0.58
SDCBP2-201ENST00000339987 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
SDCBP2-201ENST00000339987 SRSF9Q13242 221 aaKnown RBP eCLIP11.39□□□□□ -0.59
SDCBP2-201ENST00000339987 ADAMTSL4-AS1Q5T5F5 129 aa11.39□□□□□ -0.59
SDCBP2-201ENST00000339987 PANO1I0J062 215 aa11.38□□□□□ -0.59
SDCBP2-201ENST00000339987 COL5A1-AS1Q5SY13 56 aa11.38□□□□□ -0.59
SDCBP2-201ENST00000339987 C9orf129Q5T035 196 aaKnown RBP11.38□□□□□ -0.59
SDCBP2-201ENST00000339987 BVES-AS1Q5T3Y7 98 aa11.38□□□□□ -0.59
SDCBP2-201ENST00000339987 SPANXDQ9BXN6 97 aa11.38□□□□□ -0.59
SDCBP2-201ENST00000339987 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
SDCBP2-201ENST00000339987 SPANXCQ9NY87 97 aa11.38□□□□□ -0.59
SDCBP2-201ENST00000339987 DAND5Q8N907 189 aa11.37□□□□□ -0.59
SDCBP2-201ENST00000339987 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
SDCBP2-201ENST00000339987 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
SDCBP2-201ENST00000339987 A6NDN8 102 aa11.36□□□□□ -0.59
SDCBP2-201ENST00000339987 Q6ZVH6 145 aa11.36□□□□□ -0.59
SDCBP2-201ENST00000339987 LOC107984156A0A0G2JMH3 177 aa11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 ARL17AQ8IVW1 177 aa11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 CEND1Q8N111 149 aa11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 DYNC1H1Q14204 4646 aaKnown RBP11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 TMEM238LA0A1B0GVL6 79 aa11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 A6NJY4 79 aa11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 PCLOQ9Y6V0 5065 aa11.35□□□□□ -0.59
SDCBP2-201ENST00000339987 PLA2G2DQ9UNK4 145 aa11.34□□□□□ -0.59
SDCBP2-201ENST00000339987 IFITM1P13164 125 aa11.33□□□□□ -0.6
SDCBP2-201ENST00000339987 LINC00308Q8TCZ7 52 aa11.33□□□□□ -0.6
SDCBP2-201ENST00000339987 COPS9Q8WXC6 57 aa11.33□□□□□ -0.6
SDCBP2-201ENST00000339987 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
SDCBP2-201ENST00000339987 DNAH8Q96JB1 4490 aa11.33□□□□□ -0.6
SDCBP2-201ENST00000339987 A0A087WYN8 130 aa11.32□□□□□ -0.6
SDCBP2-201ENST00000339987 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
SDCBP2-201ENST00000339987 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
SDCBP2-201ENST00000339987 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
SDCBP2-201ENST00000339987 PLAC8Q9NZF1 115 aa11.32□□□□□ -0.6
SDCBP2-201ENST00000339987 A0A1W2PNN7 141 aa11.31□□□□□ -0.6
SDCBP2-201ENST00000339987 FAM168BA1KXE4 195 aa11.31□□□□□ -0.6
SDCBP2-201ENST00000339987 LRP1BQ9NZR2 4599 aa11.3□□□□□ -0.6
SDCBP2-201ENST00000339987 EIF4EBP3O60516 100 aaPredicted RBP11.3□□□□□ -0.6
SDCBP2-201ENST00000339987 NPC2P61916 151 aa11.3□□□□□ -0.6
SDCBP2-201ENST00000339987 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
SDCBP2-201ENST00000339987 RPL24P83731 157 aaKnown RBP11.29□□□□□ -0.6
SDCBP2-201ENST00000339987 SERTAD4-AS1Q5TG53 156 aa11.29□□□□□ -0.6
SDCBP2-201ENST00000339987 SCXQ7RTU7 201 aa11.29□□□□□ -0.6
SDCBP2-201ENST00000339987 KRTAP7-1Q8IUC3 87 aa11.29□□□□□ -0.6
SDCBP2-201ENST00000339987 VPREB1P12018 145 aa11.28□□□□□ -0.6
SDCBP2-201ENST00000339987 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
SDCBP2-201ENST00000339987 CIRBP-AS1Q8TBR5 109 aa11.28□□□□□ -0.6
SDCBP2-201ENST00000339987 NDUFC2O95298 119 aa11.27□□□□□ -0.6
SDCBP2-201ENST00000339987 FXYD2P54710 66 aa11.27□□□□□ -0.6
SDCBP2-201ENST00000339987 MUSTN1Q8IVN3 82 aa11.27□□□□□ -0.6
SDCBP2-201ENST00000339987 Q8NDZ9 215 aa11.27□□□□□ -0.6
SDCBP2-201ENST00000339987 XGP55808 180 aa11.26□□□□□ -0.61
SDCBP2-201ENST00000339987 NHP2Q9NX24 153 aaKnown RBP11.26□□□□□ -0.61
SDCBP2-201ENST00000339987 NKAPP1Q8N9T2 125 aa11.25□□□□□ -0.61
SDCBP2-201ENST00000339987 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
SDCBP2-201ENST00000339987 M0QXV9 152 aa11.24□□□□□ -0.61
SDCBP2-201ENST00000339987 CDK2AP2O75956 126 aa11.24□□□□□ -0.61
SDCBP2-201ENST00000339987 RYR1P21817 5038 aa11.23□□□□□ -0.61
SDCBP2-201ENST00000339987 HAMPP81172 84 aa11.23□□□□□ -0.61
SDCBP2-201ENST00000339987 TRBV10-2A0A0K0K1G8 114 aa11.22□□□□□ -0.61
SDCBP2-201ENST00000339987 M0R378 163 aa11.21□□□□□ -0.61
SDCBP2-201ENST00000339987 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
SDCBP2-201ENST00000339987 NCR3O14931 201 aa11.2□□□□□ -0.62
SDCBP2-201ENST00000339987 PRR3P79522 188 aaKnown RBP11.2□□□□□ -0.62
SDCBP2-201ENST00000339987 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
SDCBP2-201ENST00000339987 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
SDCBP2-201ENST00000339987 A4D1N5 150 aa11.19□□□□□ -0.62
SDCBP2-201ENST00000339987 C7orf33Q8WU49 177 aa11.19□□□□□ -0.62
SDCBP2-201ENST00000339987 IGKV2-28A0A075B6P5 120 aa11.18□□□□□ -0.62
SDCBP2-201ENST00000339987 A0A1B0GWB2 263 aa11.18□□□□□ -0.62
SDCBP2-201ENST00000339987 TAX1BP3O14907 124 aa11.18□□□□□ -0.62
SDCBP2-201ENST00000339987 IGKV2D-28P01615 120 aa11.18□□□□□ -0.62
SDCBP2-201ENST00000339987 RAB37Q96AX2 223 aa11.18□□□□□ -0.62
SDCBP2-201ENST00000339987 LINC00167Q96N53 147 aa11.18□□□□□ -0.62
SDCBP2-201ENST00000339987 APOBP04114 4563 aaKnown RBP11.17□□□□□ -0.62
SDCBP2-201ENST00000339987 A0A0B4J2C4 111 aa11.16□□□□□ -0.62
SDCBP2-201ENST00000339987 A0A1B0GV90 55 aa11.16□□□□□ -0.62
SDCBP2-201ENST00000339987 GAGE10A6NGK3 116 aa11.16□□□□□ -0.62
SDCBP2-201ENST00000339987 K7ERJ3 54 aa11.16□□□□□ -0.62
SDCBP2-201ENST00000339987 C9orf118A6NHY6 69 aa11.15□□□□□ -0.62
SDCBP2-201ENST00000339987 UBE2BP63146 152 aa11.14□□□□□ -0.63
SDCBP2-201ENST00000339987 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
SDCBP2-201ENST00000339987 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
SDCBP2-201ENST00000339987 IGLV6-57P01721 117 aa11.13□□□□□ -0.63
SDCBP2-201ENST00000339987 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
SDCBP2-201ENST00000339987 PRO1854Q9UHT4 67 aa11.13□□□□□ -0.63
SDCBP2-201ENST00000339987 TRAV13-2A0A0B4J235 113 aa11.12□□□□□ -0.63
SDCBP2-201ENST00000339987 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
SDCBP2-201ENST00000339987 RPL37AP8A6NKH3 93 aa11.12□□□□□ -0.63
SDCBP2-201ENST00000339987 CFC1BP0CG36 223 aa11.12□□□□□ -0.63
SDCBP2-201ENST00000339987 CFC1P0CG37 223 aa11.12□□□□□ -0.63
SDCBP2-201ENST00000339987 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
SDCBP2-201ENST00000339987 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
SDCBP2-201ENST00000339987 H3BUT2 72 aa11.1□□□□□ -0.63
SDCBP2-201ENST00000339987 OR13C6PQ8NH95 151 aa11.1□□□□□ -0.63
SDCBP2-201ENST00000339987 VAMP3Q15836 100 aa11.09□□□□□ -0.63
SDCBP2-201ENST00000339987 LYRM7Q5U5X0 104 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms