RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 BCE1O60756 84 aa11.58□□□□□ -0.56
ITGA4-202ENST00000339307 TSPAN13O95857 204 aa11.58□□□□□ -0.56
ITGA4-202ENST00000339307 ZNF22P17026 224 aaPredicted RBP11.58□□□□□ -0.56
ITGA4-202ENST00000339307 LINC00167Q96N53 147 aa11.58□□□□□ -0.56
ITGA4-202ENST00000339307 C11orf86A6NJI1 115 aa11.57□□□□□ -0.56
ITGA4-202ENST00000339307 PLNP26678 52 aa11.57□□□□□ -0.56
ITGA4-202ENST00000339307 SYS1-DBNDD2H3BUS1 97 aa11.56□□□□□ -0.56
ITGA4-202ENST00000339307 NKAPP1Q8N9T2 125 aa11.56□□□□□ -0.56
ITGA4-202ENST00000339307 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
ITGA4-202ENST00000339307 PET117Q6UWS5 81 aa11.55□□□□□ -0.56
ITGA4-202ENST00000339307 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
ITGA4-202ENST00000339307 H0Y8G0 127 aa11.54□□□□□ -0.56
ITGA4-202ENST00000339307 DPM2O94777 84 aa11.53□□□□□ -0.56
ITGA4-202ENST00000339307 S100A2P29034 98 aa11.53□□□□□ -0.56
ITGA4-202ENST00000339307 HIST3H2BBQ8N257 126 aa11.53□□□□□ -0.56
ITGA4-202ENST00000339307 PFN2P35080 140 aa11.52□□□□□ -0.56
ITGA4-202ENST00000339307 UBE2AP49459 152 aa11.52□□□□□ -0.56
ITGA4-202ENST00000339307 CRYGAP11844 174 aa11.52□□□□□ -0.57
ITGA4-202ENST00000339307 AKR1D1P51857 326 aa11.52□□□□□ -0.57
ITGA4-202ENST00000339307 TYMSOSQ8TAI1 123 aa11.52□□□□□ -0.57
ITGA4-202ENST00000339307 TMEM223A0PJW6 202 aa11.51□□□□□ -0.57
ITGA4-202ENST00000339307 IGKCP01834 107 aa11.51□□□□□ -0.57
ITGA4-202ENST00000339307 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
ITGA4-202ENST00000339307 LINC01545Q5VT33 79 aa11.51□□□□□ -0.57
ITGA4-202ENST00000339307 SFTA2Q6UW10 78 aa11.51□□□□□ -0.57
ITGA4-202ENST00000339307 ANAPC11Q9NYG5 84 aa11.51□□□□□ -0.57
ITGA4-202ENST00000339307 A0A087X002 238 aa11.5□□□□□ -0.57
ITGA4-202ENST00000339307 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
ITGA4-202ENST00000339307 IGKV2-28A0A075B6P5 120 aa11.49□□□□□ -0.57
ITGA4-202ENST00000339307 IGKV2D-28P01615 120 aa11.49□□□□□ -0.57
ITGA4-202ENST00000339307 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
ITGA4-202ENST00000339307 HIST1H2BLQ99880 126 aa11.49□□□□□ -0.57
ITGA4-202ENST00000339307 C20orf202A1L168 122 aa11.48□□□□□ -0.57
ITGA4-202ENST00000339307 KRTDAPP60985 99 aa11.48□□□□□ -0.57
ITGA4-202ENST00000339307 HERVK_113P61574 105 aa11.47□□□□□ -0.57
ITGA4-202ENST00000339307 IGLV5-37A0A075B6J1 123 aa11.46□□□□□ -0.57
ITGA4-202ENST00000339307 PMCHL2Q9BQD1 86 aa11.45□□□□□ -0.58
ITGA4-202ENST00000339307 ZNF625Q96I27 306 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-202ENST00000339307 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
ITGA4-202ENST00000339307 PLEKHB2Q96CS7 222 aa11.43□□□□□ -0.58
ITGA4-202ENST00000339307 ERG28Q9UKR5 140 aa11.43□□□□□ -0.58
ITGA4-202ENST00000339307 LEPROTO15243 131 aa11.42□□□□□ -0.58
ITGA4-202ENST00000339307 PRLHP81277 87 aa11.42□□□□□ -0.58
ITGA4-202ENST00000339307 SND1-IT1Q9HBX3 110 aa11.42□□□□□ -0.58
ITGA4-202ENST00000339307 RPL24P83731 157 aaKnown RBP11.41□□□□□ -0.58
ITGA4-202ENST00000339307 KRTAP13-1Q8IUC0 172 aa11.4□□□□□ -0.58
ITGA4-202ENST00000339307 IGKV2D-26A0A0A0MRZ7 120 aa11.39□□□□□ -0.59
ITGA4-202ENST00000339307 TMEM238C9JI98 176 aa11.39□□□□□ -0.59
ITGA4-202ENST00000339307 E9PLD3 99 aa11.39□□□□□ -0.59
ITGA4-202ENST00000339307 HERV-K104P63124 156 aa11.39□□□□□ -0.59
ITGA4-202ENST00000339307 COX17Q14061 63 aa11.39□□□□□ -0.59
ITGA4-202ENST00000339307 KRTAP13-2Q52LG2 175 aa11.39□□□□□ -0.59
ITGA4-202ENST00000339307 LINC00587B1AMM8 73 aa11.38□□□□□ -0.59
ITGA4-202ENST00000339307 VPREB1P12018 145 aa11.38□□□□□ -0.59
ITGA4-202ENST00000339307 NMUP48645 174 aa11.38□□□□□ -0.59
ITGA4-202ENST00000339307 TMEM126AQ9H061 195 aa11.38□□□□□ -0.59
ITGA4-202ENST00000339307 J3QQQ9 107 aa11.37□□□□□ -0.59
ITGA4-202ENST00000339307 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
ITGA4-202ENST00000339307 MYMXA0A1B0GTQ4 84 aa11.36□□□□□ -0.59
ITGA4-202ENST00000339307 LINC00304Q8N9R0 145 aa11.36□□□□□ -0.59
ITGA4-202ENST00000339307 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
ITGA4-202ENST00000339307 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
ITGA4-202ENST00000339307 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
ITGA4-202ENST00000339307 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
ITGA4-202ENST00000339307 LINC00158P58513 81 aa11.35□□□□□ -0.59
ITGA4-202ENST00000339307 M0R378 163 aa11.33□□□□□ -0.6
ITGA4-202ENST00000339307 A0A0U1RQV1 116 aa11.32□□□□□ -0.6
ITGA4-202ENST00000339307 TSPEAR-AS2P59090 65 aa11.32□□□□□ -0.6
ITGA4-202ENST00000339307 HIGD2AQ9BW72 106 aa11.32□□□□□ -0.6
ITGA4-202ENST00000339307 Q8NDZ9 215 aa11.31□□□□□ -0.6
ITGA4-202ENST00000339307 TMA7Q9Y2S6 64 aaKnown RBP11.31□□□□□ -0.6
ITGA4-202ENST00000339307 MUC2Q02817 5179 aa11.29□□□□□ -0.6
ITGA4-202ENST00000339307 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
ITGA4-202ENST00000339307 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
ITGA4-202ENST00000339307 ATOH7Q8N100 152 aa11.28□□□□□ -0.6
ITGA4-202ENST00000339307 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.6
ITGA4-202ENST00000339307 C3orf22Q8N5N4 141 aa11.26□□□□□ -0.61
ITGA4-202ENST00000339307 CDIP1Q9H305 208 aa11.26□□□□□ -0.61
ITGA4-202ENST00000339307 SMIM13P0DJ93 91 aa11.25□□□□□ -0.61
ITGA4-202ENST00000339307 IGLV7-46A0A075B6I9 117 aa11.24□□□□□ -0.61
ITGA4-202ENST00000339307 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
ITGA4-202ENST00000339307 ANKRD39Q53RE8 183 aa11.24□□□□□ -0.61
ITGA4-202ENST00000339307 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
ITGA4-202ENST00000339307 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
ITGA4-202ENST00000339307 NCR3O14931 201 aa11.23□□□□□ -0.61
ITGA4-202ENST00000339307 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
ITGA4-202ENST00000339307 TIMM17BO60830 172 aa11.22□□□□□ -0.61
ITGA4-202ENST00000339307 LOC107984156A0A0G2JMH3 177 aa11.2□□□□□ -0.62
ITGA4-202ENST00000339307 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
ITGA4-202ENST00000339307 ARL17AQ8IVW1 177 aa11.2□□□□□ -0.62
ITGA4-202ENST00000339307 MIR7-3HGQ8N6C7 128 aa11.2□□□□□ -0.62
ITGA4-202ENST00000339307 SPRR4Q96PI1 79 aa11.2□□□□□ -0.62
ITGA4-202ENST00000339307 ZNF706Q9Y5V0 76 aaPredicted RBP11.2□□□□□ -0.62
ITGA4-202ENST00000339307 PRYO14603 147 aa11.18□□□□□ -0.62
ITGA4-202ENST00000339307 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
ITGA4-202ENST00000339307 ETDCA0A1B0GVM5 59 aa11.17□□□□□ -0.62
ITGA4-202ENST00000339307 TPRXLQ17RH7 258 aa11.17□□□□□ -0.62
ITGA4-202ENST00000339307 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
ITGA4-202ENST00000339307 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
ITGA4-202ENST00000339307 CTAG1AP78358 180 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms