RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 C7orf33Q8WU49 177 aa16.19■□□□□ 0.18
SMDT1-201ENST00000331479 DAND5Q8N907 189 aa16.18■□□□□ 0.18
SMDT1-201ENST00000331479 PLA2G2DQ9UNK4 145 aa16.18■□□□□ 0.18
SMDT1-201ENST00000331479 PCP2Q8IVA1 136 aa16.17■□□□□ 0.18
SMDT1-201ENST00000331479 C22orf24Q9Y442 160 aa16.17■□□□□ 0.18
SMDT1-201ENST00000331479 HSBP1L1C9JCN9 74 aa16.17■□□□□ 0.18
SMDT1-201ENST00000331479 JOSD1Q15040 202 aaPredicted RBP16.17■□□□□ 0.18
SMDT1-201ENST00000331479 Q8NDZ9 215 aa16.17■□□□□ 0.18
SMDT1-201ENST00000331479 KRTAP10-4P60372 401 aaPredicted RBP16.16■□□□□ 0.18
SMDT1-201ENST00000331479 SRRM2Q9UQ35 2752 aaKnown RBP16.16■□□□□ 0.18
SMDT1-201ENST00000331479 RPL37AP61513 92 aaKnown RBP16.15■□□□□ 0.18
SMDT1-201ENST00000331479 ADAMTSL4-AS1Q5T5F5 129 aa16.15■□□□□ 0.18
SMDT1-201ENST00000331479 ABCA13Q86UQ4 5058 aa16.15■□□□□ 0.18
SMDT1-201ENST00000331479 PLA2G1BP04054 148 aaKnown RBP16.13■□□□□ 0.17
SMDT1-201ENST00000331479 KRTAP11-1Q8IUC1 163 aa16.13■□□□□ 0.17
SMDT1-201ENST00000331479 VPREB1P12018 145 aa16.12■□□□□ 0.17
SMDT1-201ENST00000331479 LITAFQ99732 161 aa16.12■□□□□ 0.17
SMDT1-201ENST00000331479 IGLV5-37A0A075B6J1 123 aa16.11■□□□□ 0.17
SMDT1-201ENST00000331479 TP73-AS1Q9UF72 201 aa16.1■□□□□ 0.17
SMDT1-201ENST00000331479 MRPL55Q7Z7F7 128 aaKnown RBP16.09■□□□□ 0.17
SMDT1-201ENST00000331479 TIMM17BO60830 172 aa16.09■□□□□ 0.17
SMDT1-201ENST00000331479 PYY3Q5JQD4 70 aa16.09■□□□□ 0.17
SMDT1-201ENST00000331479 RPL24P83731 157 aaKnown RBP16.08■□□□□ 0.16
SMDT1-201ENST00000331479 BOD1L2Q8IYS8 172 aa16.08■□□□□ 0.16
SMDT1-201ENST00000331479 NKAPP1Q8N9T2 125 aa16.08■□□□□ 0.16
SMDT1-201ENST00000331479 EIF4EBP3O60516 100 aaPredicted RBP16.07■□□□□ 0.16
SMDT1-201ENST00000331479 UBE2BP63146 152 aa16.07■□□□□ 0.16
SMDT1-201ENST00000331479 PRR3P79522 188 aaKnown RBP16.07■□□□□ 0.16
SMDT1-201ENST00000331479 SCGB1D4Q6XE38 83 aa16.07■□□□□ 0.16
SMDT1-201ENST00000331479 LINC00167Q96N53 147 aa16.07■□□□□ 0.16
SMDT1-201ENST00000331479 PSORS1C2Q9UIG4 136 aa16.07■□□□□ 0.16
SMDT1-201ENST00000331479 LOC107984156A0A0G2JMH3 177 aa16.06■□□□□ 0.16
SMDT1-201ENST00000331479 GAGE10A6NGK3 116 aa16.06■□□□□ 0.16
SMDT1-201ENST00000331479 NPC2P61916 151 aa16.06■□□□□ 0.16
SMDT1-201ENST00000331479 LBHQ53QV2 105 aaPredicted RBP16.06■□□□□ 0.16
SMDT1-201ENST00000331479 SOSTDC1Q6X4U4 206 aa16.06■□□□□ 0.16
SMDT1-201ENST00000331479 ARL17AQ8IVW1 177 aa16.06■□□□□ 0.16
SMDT1-201ENST00000331479 PAM16Q9Y3D7 125 aa16.04■□□□□ 0.16
SMDT1-201ENST00000331479 RPL37AP8A6NKH3 93 aa16.03■□□□□ 0.16
SMDT1-201ENST00000331479 MIEN1Q9BRT3 115 aa16.02■□□□□ 0.16
SMDT1-201ENST00000331479 VAMP8Q9BV40 100 aa16.02■□□□□ 0.16
SMDT1-201ENST00000331479 PKHD1L1Q86WI1 4243 aa16.01■□□□□ 0.15
SMDT1-201ENST00000331479 HNRNPA3P51991 378 aaKnown RBP16.01■□□□□ 0.15
SMDT1-201ENST00000331479 SPATA45Q537H7 98 aa16■□□□□ 0.15
SMDT1-201ENST00000331479 LINC00308Q8TCZ7 52 aa16■□□□□ 0.15
SMDT1-201ENST00000331479 PCLOQ9Y6V0 5065 aa15.99■□□□□ 0.15
SMDT1-201ENST00000331479 C1orf137Q5JT78 98 aa15.99■□□□□ 0.15
SMDT1-201ENST00000331479 TMEM238C9JI98 176 aa15.98■□□□□ 0.15
SMDT1-201ENST00000331479 NCR3O14931 201 aa15.98■□□□□ 0.15
SMDT1-201ENST00000331479 COX8AP10176 69 aa15.98■□□□□ 0.15
SMDT1-201ENST00000331479 SPANXDQ9BXN6 97 aa15.98■□□□□ 0.15
SMDT1-201ENST00000331479 SPANXCQ9NY87 97 aa15.98■□□□□ 0.15
SMDT1-201ENST00000331479 IGKV2-28A0A075B6P5 120 aa15.96■□□□□ 0.15
SMDT1-201ENST00000331479 M0R378 163 aa15.96■□□□□ 0.15
SMDT1-201ENST00000331479 IGKV2D-28P01615 120 aa15.96■□□□□ 0.15
SMDT1-201ENST00000331479 INAFM2P0DMQ5 153 aa15.96■□□□□ 0.15
SMDT1-201ENST00000331479 C14orf144Q96I85 54 aa15.96■□□□□ 0.15
SMDT1-201ENST00000331479 IGLV1-50A0A075B6I6 118 aa15.95■□□□□ 0.14
SMDT1-201ENST00000331479 NDUFC2O95298 119 aa15.93■□□□□ 0.14
SMDT1-201ENST00000331479 DLEU1O43261 78 aa15.91■□□□□ 0.14
SMDT1-201ENST00000331479 SPANXB1Q9NS25 103 aaPredicted RBP15.9■□□□□ 0.14
SMDT1-201ENST00000331479 MYCBP2O75592 4640 aa15.9■□□□□ 0.14
SMDT1-201ENST00000331479 IGLV7-43P04211 117 aa15.89■□□□□ 0.13
SMDT1-201ENST00000331479 Q6ZVH6 145 aa15.89■□□□□ 0.13
SMDT1-201ENST00000331479 TRBV10-2A0A0K0K1G8 114 aa15.88■□□□□ 0.13
SMDT1-201ENST00000331479 SRSF9Q13242 221 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMDT1-201ENST00000331479 MUSTN1Q8IVN3 82 aa15.88■□□□□ 0.13
SMDT1-201ENST00000331479 IFITM1P13164 125 aa15.87■□□□□ 0.13
SMDT1-201ENST00000331479 TRBV10-3A0A0K0K1G6 114 aa15.87■□□□□ 0.13
SMDT1-201ENST00000331479 BCE1O60756 84 aa15.85■□□□□ 0.13
SMDT1-201ENST00000331479 SLC25A34Q6PIV7 304 aa15.85■□□□□ 0.13
SMDT1-201ENST00000331479 FLG2Q5D862 2391 aaPredicted RBP15.85■□□□□ 0.13
SMDT1-201ENST00000331479 TMEM126AQ9H061 195 aa15.84■□□□□ 0.13
SMDT1-201ENST00000331479 LRP1Q07954 4544 aaKnown RBP15.84■□□□□ 0.13
SMDT1-201ENST00000331479 REG3GQ6UW15 175 aa15.83■□□□□ 0.13
SMDT1-201ENST00000331479 COPS9Q8WXC6 57 aa15.83■□□□□ 0.13
SMDT1-201ENST00000331479 PPDPFQ9H3Y8 114 aa15.83■□□□□ 0.13
SMDT1-201ENST00000331479 DDTP30046 118 aa15.83■□□□□ 0.12
SMDT1-201ENST00000331479 FAT3Q8TDW7 4589 aa15.82■□□□□ 0.12
SMDT1-201ENST00000331479 LOC105371267A0A1B0GV96 52 aa15.82■□□□□ 0.12
SMDT1-201ENST00000331479 SPINK6Q6UWN8 80 aa15.82■□□□□ 0.12
SMDT1-201ENST00000331479 IGLV6-57P01721 117 aa15.81■□□□□ 0.12
SMDT1-201ENST00000331479 S100A7L2Q5SY68 101 aa15.8■□□□□ 0.12
SMDT1-201ENST00000331479 C2orf91Q6ZV80 131 aa15.8■□□□□ 0.12
SMDT1-201ENST00000331479 KCNQ1DNQ9H478 68 aa15.8■□□□□ 0.12
SMDT1-201ENST00000331479 S100A12P80511 92 aa15.79■□□□□ 0.12
SMDT1-201ENST00000331479 PRYO14603 147 aa15.78■□□□□ 0.12
SMDT1-201ENST00000331479 ZNF861PO60384 105 aa15.78■□□□□ 0.12
SMDT1-201ENST00000331479 LINC00337Q8N6G1 96 aa15.78■□□□□ 0.12
SMDT1-201ENST00000331479 HIGD1BQ9P298 99 aa15.78■□□□□ 0.12
SMDT1-201ENST00000331479 HIST1H4GQ99525 98 aa15.77■□□□□ 0.11
SMDT1-201ENST00000331479 KRTAP13-1Q8IUC0 172 aa15.76■□□□□ 0.11
SMDT1-201ENST00000331479 LINC00518Q8N0U6 118 aa15.76■□□□□ 0.11
SMDT1-201ENST00000331479 FAM19A1Q7Z5A9 133 aa15.75■□□□□ 0.11
SMDT1-201ENST00000331479 SPRR1AP35321 89 aa15.75■□□□□ 0.11
SMDT1-201ENST00000331479 OR13C6PQ8NH95 151 aa15.75■□□□□ 0.11
SMDT1-201ENST00000331479 UBE2AP49459 152 aa15.74■□□□□ 0.11
SMDT1-201ENST00000331479 PRLHP81277 87 aa15.74■□□□□ 0.11
SMDT1-201ENST00000331479 RPL28P46779 137 aaKnown RBP15.73■□□□□ 0.11
SMDT1-201ENST00000331479 SMIM6P0DI80 62 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms