RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
NCL-201ENST00000322723 RMI2Q96E14 147 aa8.26□□□□□ -1.09
NCL-201ENST00000322723 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
NCL-201ENST00000322723 MIFP14174 115 aa8.25□□□□□ -1.09
NCL-201ENST00000322723 DNAH1Q9P2D7 4330 aa8.24□□□□□ -1.09
NCL-201ENST00000322723 GYPEP15421 78 aa8.24□□□□□ -1.09
NCL-201ENST00000322723 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
NCL-201ENST00000322723 FASNP49327 2511 aaKnown RBP8.24□□□□□ -1.09
NCL-201ENST00000322723 SEC61GP60059 68 aa8.24□□□□□ -1.09
NCL-201ENST00000322723 IGHV4-28A0A0C4DH34 117 aa8.24□□□□□ -1.09
NCL-201ENST00000322723 TENM1Q9UKZ4 2725 aa8.23□□□□□ -1.09
NCL-201ENST00000322723 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
NCL-201ENST00000322723 JMJD7-PLA2G4BH0Y9G9 81 aa8.23□□□□□ -1.09
NCL-201ENST00000322723 DEFB130BP0DP73 79 aa8.22□□□□□ -1.09
NCL-201ENST00000322723 DEFB130AP0DP74 79 aa8.22□□□□□ -1.09
NCL-201ENST00000322723 IBA57-AS1B1ANH7 110 aa8.22□□□□□ -1.09
NCL-201ENST00000322723 RPL28P46779 137 aaKnown RBP8.22□□□□□ -1.09
NCL-201ENST00000322723 EGFEM1PQ0D2K5 195 aa8.22□□□□□ -1.09
NCL-201ENST00000322723 CELA1Q9UNI1 258 aa8.22□□□□□ -1.09
NCL-201ENST00000322723 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.09
NCL-201ENST00000322723 IGKV2D-28P01615 120 aa8.21□□□□□ -1.09
NCL-201ENST00000322723 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.09
NCL-201ENST00000322723 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
NCL-201ENST00000322723 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.1
NCL-201ENST00000322723 Q8IZM0 81 aa8.21□□□□□ -1.1
NCL-201ENST00000322723 TRRAPQ9Y4A5 3859 aa8.21□□□□□ -1.1
NCL-201ENST00000322723 KIAA0087Q14695 138 aa8.21□□□□□ -1.1
NCL-201ENST00000322723 PRR4Q16378 134 aa8.2□□□□□ -1.1
NCL-201ENST00000322723 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
NCL-201ENST00000322723 TMEM256-PLSCR3K7ERE1 68 aa8.19□□□□□ -1.1
NCL-201ENST00000322723 HECTD1Q9ULT8 2610 aa8.19□□□□□ -1.1
NCL-201ENST00000322723 DEFB135Q30KP9 77 aa8.19□□□□□ -1.1
NCL-201ENST00000322723 C22orf24Q9Y442 160 aa8.19□□□□□ -1.1
NCL-201ENST00000322723 F8P00451 2351 aa8.19□□□□□ -1.1
NCL-201ENST00000322723 CCL18P55774 89 aa8.19□□□□□ -1.1
NCL-201ENST00000322723 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
NCL-201ENST00000322723 IGHV4-30-4P0DP06 118 aa8.18□□□□□ -1.1
NCL-201ENST00000322723 PRR34Q9NV39 138 aa8.18□□□□□ -1.1
NCL-201ENST00000322723 H3BNG1 76 aa8.18□□□□□ -1.1
NCL-201ENST00000322723 HTN3P15516 51 aa8.18□□□□□ -1.1
NCL-201ENST00000322723 C9orf129Q5T035 196 aaKnown RBP8.18□□□□□ -1.1
NCL-201ENST00000322723 LINC00474Q9P2X8 69 aa8.18□□□□□ -1.1
NCL-201ENST00000322723 C2orf48Q96LS8 159 aa8.17□□□□□ -1.1
NCL-201ENST00000322723 C6orf99Q4VX62 202 aa8.17□□□□□ -1.1
NCL-201ENST00000322723 CCKP06307 115 aa8.16□□□□□ -1.1
NCL-201ENST00000322723 SS18Q15532 418 aa8.16□□□□□ -1.1
NCL-201ENST00000322723 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
NCL-201ENST00000322723 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
NCL-201ENST00000322723 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
NCL-201ENST00000322723 LELP1Q5T871 98 aa8.15□□□□□ -1.1
NCL-201ENST00000322723 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.1
NCL-201ENST00000322723 DEFB105AQ8NG35 78 aa8.15□□□□□ -1.11
NCL-201ENST00000322723 FUSP35637 526 aaKnown RBP eCLIP8.14□□□□□ -1.112e-6■□□□□ 9.2
NCL-201ENST00000322723 COX17Q14061 63 aa8.14□□□□□ -1.11
NCL-201ENST00000322723 SPART-AS1P0CW21 52 aa8.14□□□□□ -1.11
NCL-201ENST00000322723 RETNQ9HD89 108 aa8.14□□□□□ -1.11
NCL-201ENST00000322723 TRAV7A0A075B6U4 112 aa8.14□□□□□ -1.11
NCL-201ENST00000322723 Q8N3U1 123 aa8.13□□□□□ -1.11
NCL-201ENST00000322723 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
NCL-201ENST00000322723 OXTP01178 125 aa8.13□□□□□ -1.11
NCL-201ENST00000322723 NANOS2P60321 138 aaKnown RBP8.13□□□□□ -1.11
NCL-201ENST00000322723 MUC7Q8TAX7 377 aa8.13□□□□□ -1.11
NCL-201ENST00000322723 LINC00167Q96N53 147 aa8.12□□□□□ -1.11
NCL-201ENST00000322723 PSPHP1O15172 72 aa8.12□□□□□ -1.11
NCL-201ENST00000322723 KRTAP26-1Q6PEX3 210 aa8.12□□□□□ -1.11
NCL-201ENST00000322723 DYNC2H1Q8NCM8 4307 aaKnown RBP8.11□□□□□ -1.11
NCL-201ENST00000322723 NREPQ16612 68 aa8.11□□□□□ -1.11
NCL-201ENST00000322723 TEP1Q99973 2627 aaKnown RBP8.11□□□□□ -1.11
NCL-201ENST00000322723 REG3AQ06141 175 aa8.11□□□□□ -1.11
NCL-201ENST00000322723 LINC00269Q8N2A0 174 aa8.11□□□□□ -1.11
NCL-201ENST00000322723 CHCHD10Q8WYQ3 142 aaPredicted RBP8.11□□□□□ -1.11
NCL-201ENST00000322723 OBSCN-AS1Q96MR7 158 aa8.11□□□□□ -1.11
NCL-201ENST00000322723 DEFB4AO15263 64 aa8.1□□□□□ -1.11
NCL-201ENST00000322723 KRTAP24-1Q3LI83 254 aa8.1□□□□□ -1.11
NCL-201ENST00000322723 Q6ZQY7 126 aa8.1□□□□□ -1.11
NCL-201ENST00000322723 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
NCL-201ENST00000322723 ANGP03950 147 aaKnown RBP8.1□□□□□ -1.11
NCL-201ENST00000322723 TRAV10A0A0B4J240 114 aa8.1□□□□□ -1.11
NCL-201ENST00000322723 Q8N9L7 120 aa8.1□□□□□ -1.11
NCL-201ENST00000322723 A0A0J9YWU9 116 aa8.09□□□□□ -1.11
NCL-201ENST00000322723 LYPD5Q6UWN5 251 aa8.09□□□□□ -1.11
NCL-201ENST00000322723 Q5XG85 94 aa8.08□□□□□ -1.12
NCL-201ENST00000322723 HUWE1Q7Z6Z7 4374 aaKnown RBP8.08□□□□□ -1.12
NCL-201ENST00000322723 C3orf84H3BNL1 204 aa8.07□□□□□ -1.12
NCL-201ENST00000322723 C9orf116Q5BN46 136 aaPredicted RBP8.06□□□□□ -1.12
NCL-201ENST00000322723 Q8N814 137 aa8.06□□□□□ -1.12
NCL-201ENST00000322723 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
NCL-201ENST00000322723 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
NCL-201ENST00000322723 Q8NDZ9 215 aa8.06□□□□□ -1.12
NCL-201ENST00000322723 ATRQ13535 2644 aa8.05□□□□□ -1.12
NCL-201ENST00000322723 BPY2O14599 106 aa8.05□□□□□ -1.12
NCL-201ENST00000322723 TM2D3Q9BRN9 247 aa8.05□□□□□ -1.12
NCL-201ENST00000322723 FLNBO75369 2602 aaKnown RBP8.05□□□□□ -1.12
NCL-201ENST00000322723 Q6ZVQ6 151 aa8.05□□□□□ -1.12
NCL-201ENST00000322723 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
NCL-201ENST00000322723 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
NCL-201ENST00000322723 TMEM254Q8TBM7 123 aa8.04□□□□□ -1.12
NCL-201ENST00000322723 NDUFC1O43677 76 aa8.03□□□□□ -1.12
NCL-201ENST00000322723 OXLD1Q5BKU9 147 aa8.03□□□□□ -1.12
NCL-201ENST00000322723 FBN1P35555 2871 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms