RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 DNAH10OSP0CZ25 163 aa5.54□□□□□ -1.52
CHD6-201ENST00000309279 REG3GQ6UW15 175 aa5.54□□□□□ -1.52
CHD6-201ENST00000309279 Q6ZR54 194 aa5.54□□□□□ -1.52
CHD6-201ENST00000309279 NTM-AS1Q6ZSK4 140 aa5.54□□□□□ -1.52
CHD6-201ENST00000309279 WFDC10BQ8IUB3 73 aa5.54□□□□□ -1.52
CHD6-201ENST00000309279 NRACQ8N912 160 aa5.54□□□□□ -1.52
CHD6-201ENST00000309279 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.53□□□□□ -1.52
CHD6-201ENST00000309279 NBDYA0A0U1RRE5 68 aa5.53□□□□□ -1.52
CHD6-201ENST00000309279 SDHAF1A6NFY7 115 aa5.53□□□□□ -1.52
CHD6-201ENST00000309279 CKS2P33552 79 aa5.53□□□□□ -1.52
CHD6-201ENST00000309279 POLR2KP53803 58 aaKnown RBP5.53□□□□□ -1.52
CHD6-201ENST00000309279 TMEM136Q6ZRR5 245 aa5.53□□□□□ -1.52
CHD6-201ENST00000309279 C5orf38Q86SI9 138 aa5.53□□□□□ -1.52
CHD6-201ENST00000309279 IGLV2-18A0A075B6J9 118 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 D6R8Y8 96 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 PRSS1P07477 247 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 LINC01556Q5JQF7 62 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 Q8N8P6 123 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 FRAS1Q86XX4 4008 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 PRSS2P07478 247 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 SMIM13P0DJ93 91 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
CHD6-201ENST00000309279 ORMDL3Q8N138 153 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 FAM104AQ969W3 186 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 KRTAP1-5Q9BYS1 174 aa5.52□□□□□ -1.53
CHD6-201ENST00000309279 TRBV25-1A0A075B6N4 114 aa5.51□□□□□ -1.53
CHD6-201ENST00000309279 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
CHD6-201ENST00000309279 I3L3M4 83 aa5.51□□□□□ -1.53
CHD6-201ENST00000309279 UBE2AP49459 152 aa5.51□□□□□ -1.53
CHD6-201ENST00000309279 CHCHD7Q9BUK0 85 aa5.51□□□□□ -1.53
CHD6-201ENST00000309279 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
CHD6-201ENST00000309279 IGHV1-24A0A0C4DH33 117 aa5.5□□□□□ -1.53
CHD6-201ENST00000309279 M0R2N4 97 aa5.5□□□□□ -1.53
CHD6-201ENST00000309279 NPYP01303 97 aa5.5□□□□□ -1.53
CHD6-201ENST00000309279 FUSP35637 526 aaKnown RBP eCLIP5.5□□□□□ -1.53
CHD6-201ENST00000309279 HIST1H4AP62805 103 aaKnown RBP5.5□□□□□ -1.53
CHD6-201ENST00000309279 SERP2Q8N6R1 65 aa5.5□□□□□ -1.53
CHD6-201ENST00000309279 DAND5Q8N907 189 aa5.5□□□□□ -1.53
CHD6-201ENST00000309279 APCSP02743 223 aa5.49□□□□□ -1.53
CHD6-201ENST00000309279 CHTF8P0CG12 524 aa5.49□□□□□ -1.53
CHD6-201ENST00000309279 KRTDAPP60985 99 aa5.49□□□□□ -1.53
CHD6-201ENST00000309279 CYSTM1Q9H1C7 97 aa5.49□□□□□ -1.53
CHD6-201ENST00000309279 A0A1B0GUV1 79 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 A6NN06 94 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 IBA57-AS1B1ANH7 110 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 H7C423 109 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 Q8N3U1 123 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 DEFB104AQ8WTQ1 72 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 LINC01600Q96MT4 127 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 SMIM2Q9BVW6 85 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 DNAH17Q9UFH2 4485 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 IGHV3-30P01768 117 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 IGHV3-33P01772 117 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 IGHV3-30-3P0DP02 117 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 IGHV3-30-5P0DP03 117 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 CIRBPQ14011 172 aaKnown RBP5.48□□□□□ -1.53
CHD6-201ENST00000309279 PRSS3P2Q8NHM4 247 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 HIGD1BQ9P298 99 aa5.48□□□□□ -1.53
CHD6-201ENST00000309279 RTL8CO15255 209 aa5.47□□□□□ -1.53
CHD6-201ENST00000309279 CCKP06307 115 aa5.47□□□□□ -1.53
CHD6-201ENST00000309279 C1orf134Q5TEV5 83 aa5.47□□□□□ -1.53
CHD6-201ENST00000309279 SOSTDC1Q6X4U4 206 aa5.47□□□□□ -1.53
CHD6-201ENST00000309279 NXT2Q9NPJ8 142 aaKnown RBP5.47□□□□□ -1.53
CHD6-201ENST00000309279 TRAPPC1Q9Y5R8 145 aa5.47□□□□□ -1.53
CHD6-201ENST00000309279 FAT2Q9NYQ8 4349 aa5.46□□□□□ -1.53
CHD6-201ENST00000309279 A0A1B0GW54 56 aa5.46□□□□□ -1.54
CHD6-201ENST00000309279 KRTAP16-1A8MUX0 517 aa5.46□□□□□ -1.54
CHD6-201ENST00000309279 HERVK_113P61574 105 aa5.46□□□□□ -1.54
CHD6-201ENST00000309279 ATP11AUNQ6ZP68 121 aa5.46□□□□□ -1.54
CHD6-201ENST00000309279 Q6ZRN7 208 aaPredicted RBP5.46□□□□□ -1.54
CHD6-201ENST00000309279 Q6ZRP5 223 aa5.46□□□□□ -1.54
CHD6-201ENST00000309279 C2orf91Q6ZV80 131 aa5.46□□□□□ -1.54
CHD6-201ENST00000309279 K7EMI3 77 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 FCER1GP30273 86 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 C20orf203Q8NBC4 194 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 PRR34Q9NV39 138 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 KLK12Q9UKR0 248 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 IGLV4-60A0A075B6I1 120 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.45□□□□□ -1.54
CHD6-201ENST00000309279 IGKV2-29A2NJV5 120 aaPredicted RBP5.45□□□□□ -1.54
CHD6-201ENST00000309279 LEPROTO15243 131 aa5.45□□□□□ -1.54
CHD6-201ENST00000309279 LINC01546A6NGU7 62 aa5.44□□□□□ -1.54
CHD6-201ENST00000309279 ANGP03950 147 aaKnown RBP5.44□□□□□ -1.54
CHD6-201ENST00000309279 COX8AP10176 69 aa5.44□□□□□ -1.54
CHD6-201ENST00000309279 IFI27P40305 119 aaPredicted RBP5.44□□□□□ -1.54
CHD6-201ENST00000309279 LINC00310P59036 64 aa5.44□□□□□ -1.54
CHD6-201ENST00000309279 ENHOQ6UWT2 76 aa5.44□□□□□ -1.54
CHD6-201ENST00000309279 PKD1P98161 4303 aa5.43□□□□□ -1.54
CHD6-201ENST00000309279 LINC00269Q8N2A0 174 aa5.43□□□□□ -1.54
CHD6-201ENST00000309279 UBE2WQ96B02 151 aa5.43□□□□□ -1.54
CHD6-201ENST00000309279 TIMM21Q9BVV7 248 aa5.43□□□□□ -1.54
CHD6-201ENST00000309279 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
CHD6-201ENST00000309279 UBE2D4Q9Y2X8 147 aa5.43□□□□□ -1.54
CHD6-201ENST00000309279 KRTAP4-16G5E9R7 235 aaPredicted RBP5.42□□□□□ -1.54
CHD6-201ENST00000309279 RBM3P98179 157 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms