RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
COL6A2-201ENST00000300527 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
COL6A2-201ENST00000300527 ITPR3Q14573 2671 aa10.03□□□□□ -0.8
COL6A2-201ENST00000300527 LINC00167Q96N53 147 aa10.02□□□□□ -0.8
COL6A2-201ENST00000300527 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
COL6A2-201ENST00000300527 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
COL6A2-201ENST00000300527 KIAA0087Q14695 138 aa10.02□□□□□ -0.81
COL6A2-201ENST00000300527 CD164L2Q6UWJ8 174 aa10.02□□□□□ -0.81
COL6A2-201ENST00000300527 DAD1P61803 113 aa10.01□□□□□ -0.81
COL6A2-201ENST00000300527 LINC00336Q6ZUF6 198 aa10.01□□□□□ -0.81
COL6A2-201ENST00000300527 NOTCH2Q04721 2471 aa10.01□□□□□ -0.81
COL6A2-201ENST00000300527 CSNK1G2-AS1Q8NCQ2 148 aa10.01□□□□□ -0.81
COL6A2-201ENST00000300527 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
COL6A2-201ENST00000300527 PRO0255Q9UI72 69 aa10□□□□□ -0.81
COL6A2-201ENST00000300527 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
COL6A2-201ENST00000300527 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
COL6A2-201ENST00000300527 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
COL6A2-201ENST00000300527 SERP1Q9Y6X1 66 aa9.99□□□□□ -0.81
COL6A2-201ENST00000300527 MPLKIPQ8TAP9 179 aa9.99□□□□□ -0.81
COL6A2-201ENST00000300527 KLK12Q9UKR0 248 aa9.99□□□□□ -0.81
COL6A2-201ENST00000300527 CYSRT1A8MQ03 144 aa9.98□□□□□ -0.81
COL6A2-201ENST00000300527 LYPD5Q6UWN5 251 aa9.97□□□□□ -0.81
COL6A2-201ENST00000300527 C19orf73Q9NVV2 129 aa9.97□□□□□ -0.81
COL6A2-201ENST00000300527 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.97□□□□□ -0.81
COL6A2-201ENST00000300527 MUC7Q8TAX7 377 aa9.97□□□□□ -0.81
COL6A2-201ENST00000300527 A0A1B0GUV1 79 aa9.97□□□□□ -0.81
COL6A2-201ENST00000300527 A0A0U1RQV1 116 aa9.96□□□□□ -0.81
COL6A2-201ENST00000300527 DEFB135Q30KP9 77 aa9.96□□□□□ -0.81
COL6A2-201ENST00000300527 CMC4P56277 68 aaPredicted RBP9.96□□□□□ -0.82
COL6A2-201ENST00000300527 IGLV1-51P01701 117 aa9.95□□□□□ -0.82
COL6A2-201ENST00000300527 DEFB113Q30KQ7 82 aa9.95□□□□□ -0.82
COL6A2-201ENST00000300527 DIRC1Q969H9 104 aa9.95□□□□□ -0.82
COL6A2-201ENST00000300527 COX17Q14061 63 aa9.95□□□□□ -0.82
COL6A2-201ENST00000300527 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
COL6A2-201ENST00000300527 BRK1Q8WUW1 75 aa9.94□□□□□ -0.82
COL6A2-201ENST00000300527 WIPF1O43516 503 aa9.94□□□□□ -0.82
COL6A2-201ENST00000300527 DEFB105AQ8NG35 78 aa9.94□□□□□ -0.82
COL6A2-201ENST00000300527 C3orf84H3BNL1 204 aa9.93□□□□□ -0.82
COL6A2-201ENST00000300527 NREPQ16612 68 aa9.93□□□□□ -0.82
COL6A2-201ENST00000300527 TRBV7-6A0A0J9YX20 115 aa9.92□□□□□ -0.82
COL6A2-201ENST00000300527 LOC110117498A0A087WWA1 95 aa9.92□□□□□ -0.82
COL6A2-201ENST00000300527 IGHV4-28A0A0C4DH34 117 aa9.92□□□□□ -0.82
COL6A2-201ENST00000300527 MIFP14174 115 aa9.92□□□□□ -0.82
COL6A2-201ENST00000300527 COX7BP24311 80 aa9.92□□□□□ -0.82
COL6A2-201ENST00000300527 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
COL6A2-201ENST00000300527 ZNF469Q96JG9 3925 aaPredicted RBP9.91□□□□□ -0.82
COL6A2-201ENST00000300527 BPY2O14599 106 aa9.91□□□□□ -0.82
COL6A2-201ENST00000300527 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
COL6A2-201ENST00000300527 KLKP1Q107X0 134 aa9.9□□□□□ -0.82
COL6A2-201ENST00000300527 FP248Q71RG6 208 aaPredicted RBP9.9□□□□□ -0.82
COL6A2-201ENST00000300527 SMIM26A0A096LP01 95 aa9.9□□□□□ -0.82
COL6A2-201ENST00000300527 TMEM254Q8TBM7 123 aa9.88□□□□□ -0.83
COL6A2-201ENST00000300527 X6R8D5 127 aa9.88□□□□□ -0.83
COL6A2-201ENST00000300527 F8P00451 2351 aa9.88□□□□□ -0.83
COL6A2-201ENST00000300527 UNC79Q9P2D8 2635 aa9.88□□□□□ -0.83
COL6A2-201ENST00000300527 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
COL6A2-201ENST00000300527 PRB2P02812 416 aaPredicted RBP9.88□□□□□ -0.83
COL6A2-201ENST00000300527 CELA1Q9UNI1 258 aa9.88□□□□□ -0.83
COL6A2-201ENST00000300527 IGLV6-57P01721 117 aa9.87□□□□□ -0.83
COL6A2-201ENST00000300527 PRO0628Q9UI54 55 aa9.87□□□□□ -0.83
COL6A2-201ENST00000300527 CXCL6P80162 114 aa9.87□□□□□ -0.83
COL6A2-201ENST00000300527 C6orf48Q9UBA6 75 aa9.86□□□□□ -0.83
COL6A2-201ENST00000300527 PDE6GP18545 87 aa9.86□□□□□ -0.83
COL6A2-201ENST00000300527 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
COL6A2-201ENST00000300527 FAM229BQ4G0N7 80 aa9.84□□□□□ -0.83
COL6A2-201ENST00000300527 HIGD2AQ9BW72 106 aa9.83□□□□□ -0.84
COL6A2-201ENST00000300527 VWFP04275 2813 aa9.83□□□□□ -0.84
COL6A2-201ENST00000300527 TRBV7-4A0A0J9YYF1 115 aa9.82□□□□□ -0.84
COL6A2-201ENST00000300527 FAM30AQ9NZY2 134 aa9.82□□□□□ -0.84
COL6A2-201ENST00000300527 FUSP35637 526 aaKnown RBP eCLIP9.8□□□□□ -0.84
COL6A2-201ENST00000300527 C9orf66Q5T8R8 295 aa9.8□□□□□ -0.84
COL6A2-201ENST00000300527 BCE1O60756 84 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 PRR4Q16378 134 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 A0A0J9YWU9 116 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 PRYO14603 147 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 NDUFC1O43677 76 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 IGHV4-30-4P0DP06 118 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
COL6A2-201ENST00000300527 USP24Q9UPU5 2620 aa9.78□□□□□ -0.84
COL6A2-201ENST00000300527 ELOF1P60002 83 aaKnown RBP9.77□□□□□ -0.84
COL6A2-201ENST00000300527 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
COL6A2-201ENST00000300527 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
COL6A2-201ENST00000300527 Q6ZRU5 148 aa9.76□□□□□ -0.85
COL6A2-201ENST00000300527 F8WDY8 70 aa9.76□□□□□ -0.85
COL6A2-201ENST00000300527 IGKV4-1P06312 121 aa9.76□□□□□ -0.85
COL6A2-201ENST00000300527 KRTAP1-3Q8IUG1 177 aa9.76□□□□□ -0.85
COL6A2-201ENST00000300527 LELP1Q5T871 98 aa9.75□□□□□ -0.85
COL6A2-201ENST00000300527 VPREB1P12018 145 aa9.74□□□□□ -0.85
COL6A2-201ENST00000300527 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
COL6A2-201ENST00000300527 WFDC10BQ8IUB3 73 aa9.74□□□□□ -0.85
COL6A2-201ENST00000300527 M0R378 163 aa9.73□□□□□ -0.85
COL6A2-201ENST00000300527 SMR3AQ99954 134 aa9.73□□□□□ -0.85
COL6A2-201ENST00000300527 ATRQ13535 2644 aa9.72□□□□□ -0.85
COL6A2-201ENST00000300527 RPL37AP8A6NKH3 93 aa9.72□□□□□ -0.85
COL6A2-201ENST00000300527 H3BQ85 93 aa9.72□□□□□ -0.85
COL6A2-201ENST00000300527 SPART-AS1P0CW21 52 aa9.72□□□□□ -0.85
COL6A2-201ENST00000300527 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
COL6A2-201ENST00000300527 ITPR2Q14571 2701 aa9.71□□□□□ -0.85
COL6A2-201ENST00000300527 TEP1Q99973 2627 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms