RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SONP18583 2426 aaKnown RBP10.6□□□□□ -0.71
FNDC1-201ENST00000297267 CELSR3Q9NYQ7 3312 aa10.6□□□□□ -0.71
FNDC1-201ENST00000297267 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
FNDC1-201ENST00000297267 COX8CQ7Z4L0 72 aa10.59□□□□□ -0.71
FNDC1-201ENST00000297267 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
FNDC1-201ENST00000297267 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
FNDC1-201ENST00000297267 IGHV3OR16-9A0A0B4J2B5 98 aa10.54□□□□□ -0.72
FNDC1-201ENST00000297267 ABCA2Q9BZC7 2435 aa10.54□□□□□ -0.72
FNDC1-201ENST00000297267 ATRXP46100 2492 aa10.53□□□□□ -0.72
FNDC1-201ENST00000297267 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
FNDC1-201ENST00000297267 LINC01546A6NGU7 62 aa10.53□□□□□ -0.72
FNDC1-201ENST00000297267 IGF2RP11717 2491 aa10.52□□□□□ -0.73
FNDC1-201ENST00000297267 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.73
FNDC1-201ENST00000297267 TTC28Q96AY4 2481 aa10.52□□□□□ -0.73
FNDC1-201ENST00000297267 EIF4EBP3O60516 100 aaPredicted RBP10.51□□□□□ -0.73
FNDC1-201ENST00000297267 LINC00476Q8WZB0 136 aa10.51□□□□□ -0.73
FNDC1-201ENST00000297267 UNC80Q8N2C7 3258 aa10.5□□□□□ -0.73
FNDC1-201ENST00000297267 PRO0461Q9UI25 63 aa10.5□□□□□ -0.73
FNDC1-201ENST00000297267 hDV103S1A0JD37 113 aa10.5□□□□□ -0.73
FNDC1-201ENST00000297267 EPM2AB3EWF7 344 aa10.5□□□□□ -0.73
FNDC1-201ENST00000297267 Q6ZRP5 223 aa10.5□□□□□ -0.73
FNDC1-201ENST00000297267 KRTAP24-1Q3LI83 254 aa10.49□□□□□ -0.73
FNDC1-201ENST00000297267 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
FNDC1-201ENST00000297267 Q6ZQT0 140 aa10.48□□□□□ -0.73
FNDC1-201ENST00000297267 LINC00588Q9Y4M8 146 aa10.48□□□□□ -0.73
FNDC1-201ENST00000297267 RTL8CO15255 209 aa10.47□□□□□ -0.73
FNDC1-201ENST00000297267 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
FNDC1-201ENST00000297267 A0A0C4DFX4 3053 aa10.47□□□□□ -0.73
FNDC1-201ENST00000297267 NOTCH2Q04721 2471 aa10.47□□□□□ -0.73
FNDC1-201ENST00000297267 DNAH10OSP0CZ25 163 aa10.46□□□□□ -0.73
FNDC1-201ENST00000297267 LAMA2P24043 3122 aaKnown RBP10.46□□□□□ -0.73
FNDC1-201ENST00000297267 A0A1B0GU69 56 aa10.45□□□□□ -0.74
FNDC1-201ENST00000297267 ELOF1P60002 83 aaKnown RBP10.45□□□□□ -0.74
FNDC1-201ENST00000297267 CXCL6P80162 114 aa10.45□□□□□ -0.74
FNDC1-201ENST00000297267 C2CD3Q4AC94 2353 aa10.44□□□□□ -0.74
FNDC1-201ENST00000297267 NHLRC4P0CG21 123 aaPredicted RBP10.43□□□□□ -0.74
FNDC1-201ENST00000297267 Q96NJ1 140 aa10.43□□□□□ -0.74
FNDC1-201ENST00000297267 CFAP54Q96N23 3096 aa10.42□□□□□ -0.74
FNDC1-201ENST00000297267 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
FNDC1-201ENST00000297267 CCDC168Q8NDH2 2452 aa10.41□□□□□ -0.74
FNDC1-201ENST00000297267 K7EQZ3 153 aa10.41□□□□□ -0.74
FNDC1-201ENST00000297267 KRTAP10-11P60412 298 aa10.41□□□□□ -0.74
FNDC1-201ENST00000297267 Q8NAQ8 132 aa10.39□□□□□ -0.75
FNDC1-201ENST00000297267 LITAFQ99732 161 aa10.38□□□□□ -0.75
FNDC1-201ENST00000297267 KRTAP10-3P60369 221 aa10.38□□□□□ -0.75
FNDC1-201ENST00000297267 ACACBO00763 2458 aa10.37□□□□□ -0.75
FNDC1-201ENST00000297267 LINC00313P59037 77 aa10.37□□□□□ -0.75
FNDC1-201ENST00000297267 Q6ZRX8 168 aa10.37□□□□□ -0.75
FNDC1-201ENST00000297267 TYMSOSQ8TAI1 123 aa10.36□□□□□ -0.75
FNDC1-201ENST00000297267 C9orf129Q5T035 196 aaKnown RBP10.35□□□□□ -0.75
FNDC1-201ENST00000297267 DSCR10P59022 87 aa10.35□□□□□ -0.75
FNDC1-201ENST00000297267 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
FNDC1-201ENST00000297267 SMR3BP02814 79 aaPredicted RBP10.34□□□□□ -0.75
FNDC1-201ENST00000297267 LINC01561Q8N1V8 128 aa10.33□□□□□ -0.76
FNDC1-201ENST00000297267 PRUNE2Q8WUY3 3088 aa10.33□□□□□ -0.76
FNDC1-201ENST00000297267 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
FNDC1-201ENST00000297267 USP34Q70CQ2 3546 aa10.32□□□□□ -0.76
FNDC1-201ENST00000297267 C16orf90A8MZG2 172 aa10.32□□□□□ -0.76
FNDC1-201ENST00000297267 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
FNDC1-201ENST00000297267 TRBV7-4A0A0J9YYF1 115 aa10.31□□□□□ -0.76
FNDC1-201ENST00000297267 NCOR2Q9Y618 2525 aa10.31□□□□□ -0.76
FNDC1-201ENST00000297267 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
FNDC1-201ENST00000297267 NAV2Q8IVL1 2488 aa10.3□□□□□ -0.76
FNDC1-201ENST00000297267 TRIOO75962 3097 aa10.3□□□□□ -0.76
FNDC1-201ENST00000297267 NBDYA0A0U1RRE5 68 aa10.3□□□□□ -0.76
FNDC1-201ENST00000297267 ACYP2P14621 99 aa10.29□□□□□ -0.76
FNDC1-201ENST00000297267 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
FNDC1-201ENST00000297267 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.76
FNDC1-201ENST00000297267 ATP11AUNQ6ZP68 121 aa10.27□□□□□ -0.76
FNDC1-201ENST00000297267 FN1P02751 2386 aaKnown RBP10.27□□□□□ -0.77
FNDC1-201ENST00000297267 A8MUN3 132 aa10.26□□□□□ -0.77
FNDC1-201ENST00000297267 VPREB1P12018 145 aa10.25□□□□□ -0.77
FNDC1-201ENST00000297267 Q8NBF4 154 aa10.25□□□□□ -0.77
FNDC1-201ENST00000297267 F8WDY8 70 aa10.24□□□□□ -0.77
FNDC1-201ENST00000297267 CHD7Q9P2D1 2997 aa10.24□□□□□ -0.77
FNDC1-201ENST00000297267 FREM2Q5SZK8 3169 aa10.24□□□□□ -0.77
FNDC1-201ENST00000297267 LRRK2Q5S007 2527 aa10.23□□□□□ -0.77
FNDC1-201ENST00000297267 LOC110117498A0A087WWA1 95 aa10.23□□□□□ -0.77
FNDC1-201ENST00000297267 OBSCN-AS1Q96MR7 158 aa10.23□□□□□ -0.77
FNDC1-201ENST00000297267 PRO0628Q9UI54 55 aa10.23□□□□□ -0.77
FNDC1-201ENST00000297267 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
FNDC1-201ENST00000297267 HTTP42858 3142 aa10.21□□□□□ -0.77
FNDC1-201ENST00000297267 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.77
FNDC1-201ENST00000297267 IGLV6-57P01721 117 aa10.21□□□□□ -0.78
FNDC1-201ENST00000297267 IGFL1Q6UW32 110 aa10.21□□□□□ -0.78
FNDC1-201ENST00000297267 APLNQ9ULZ1 77 aa10.21□□□□□ -0.78
FNDC1-201ENST00000297267 MYO15AQ9UKN7 3530 aa10.21□□□□□ -0.78
FNDC1-201ENST00000297267 BCE1O60756 84 aa10.2□□□□□ -0.78
FNDC1-201ENST00000297267 TRAV22A0A0B4J277 110 aa10.2□□□□□ -0.78
FNDC1-201ENST00000297267 COA5Q86WW8 74 aa10.2□□□□□ -0.78
FNDC1-201ENST00000297267 GVQW2A0A096LPI5 108 aaPredicted RBP10.19□□□□□ -0.78
FNDC1-201ENST00000297267 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
FNDC1-201ENST00000297267 VCANP13611 3396 aa10.17□□□□□ -0.78
FNDC1-201ENST00000297267 K7EIL1 84 aa10.16□□□□□ -0.78
FNDC1-201ENST00000297267 SPEGQ15772 3267 aa10.15□□□□□ -0.78
FNDC1-201ENST00000297267 GIG44P09565 113 aaPredicted RBP10.15□□□□□ -0.78
FNDC1-201ENST00000297267 VPS13AQ96RL7 3174 aa10.15□□□□□ -0.78
FNDC1-201ENST00000297267 FAM229AH3BQW9 127 aa10.15□□□□□ -0.78
FNDC1-201ENST00000297267 ERC2-IT1O76042 136 aa10.15□□□□□ -0.79
FNDC1-201ENST00000297267 Q8N377 158 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms