RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LINC00588Q9Y4M8 146 aa12.2□□□□□ -0.46
CDC42EP3-201ENST00000295324 A0A087WVE0 104 aa12.19□□□□□ -0.46
CDC42EP3-201ENST00000295324 HELZ2Q9BYK8 2649 aaKnown RBP12.19□□□□□ -0.46
CDC42EP3-201ENST00000295324 LINC01546A6NGU7 62 aa12.18□□□□□ -0.46
CDC42EP3-201ENST00000295324 FAM229AH3BQW9 127 aa12.18□□□□□ -0.46
CDC42EP3-201ENST00000295324 LIMD2Q9BT23 127 aa12.18□□□□□ -0.46
CDC42EP3-201ENST00000295324 SMCR5Q8TEV8 140 aa12.18□□□□□ -0.46
CDC42EP3-201ENST00000295324 LINC00575Q6W349 94 aa12.17□□□□□ -0.46
CDC42EP3-201ENST00000295324 USP24Q9UPU5 2620 aa12.17□□□□□ -0.46
CDC42EP3-201ENST00000295324 K7EIL1 84 aa12.16□□□□□ -0.46
CDC42EP3-201ENST00000295324 C16orf90A8MZG2 172 aa12.16□□□□□ -0.46
CDC42EP3-201ENST00000295324 TRBV7-6A0A0J9YX20 115 aa12.16□□□□□ -0.46
CDC42EP3-201ENST00000295324 IGHV6-1A0A0B4J1U7 121 aa12.15□□□□□ -0.46
CDC42EP3-201ENST00000295324 C6orf48Q9UBA6 75 aa12.15□□□□□ -0.46
CDC42EP3-201ENST00000295324 A0A087WSZ3 146 aa12.15□□□□□ -0.46
CDC42EP3-201ENST00000295324 DNAH12Q6ZR08 3092 aa12.14□□□□□ -0.47
CDC42EP3-201ENST00000295324 RTL8CO15255 209 aa12.14□□□□□ -0.47
CDC42EP3-201ENST00000295324 LINC00337Q8N6G1 96 aa12.14□□□□□ -0.47
CDC42EP3-201ENST00000295324 Q9UF83 564 aa12.13□□□□□ -0.47
CDC42EP3-201ENST00000295324 LINC00167Q96N53 147 aa12.13□□□□□ -0.47
CDC42EP3-201ENST00000295324 IGLV5-45A0A087WSX0 123 aa12.12□□□□□ -0.47
CDC42EP3-201ENST00000295324 TRBV7-7A0A0K0K1E9 115 aa12.11□□□□□ -0.47
CDC42EP3-201ENST00000295324 A8MTW9 85 aa12.11□□□□□ -0.47
CDC42EP3-201ENST00000295324 KRTAP10-11P60412 298 aa12.11□□□□□ -0.47
CDC42EP3-201ENST00000295324 KRTAP1-3Q8IUG1 177 aa12.11□□□□□ -0.47
CDC42EP3-201ENST00000295324 C19orf73Q9NVV2 129 aa12.1□□□□□ -0.47
CDC42EP3-201ENST00000295324 PSPHP1O15172 72 aa12.1□□□□□ -0.47
CDC42EP3-201ENST00000295324 Q8N3U1 123 aa12.1□□□□□ -0.47
CDC42EP3-201ENST00000295324 DNAH10OSP0CZ25 163 aa12.1□□□□□ -0.47
CDC42EP3-201ENST00000295324 LINC01547P58512 204 aaPredicted RBP12.1□□□□□ -0.47
CDC42EP3-201ENST00000295324 CSNK1G2-AS1Q8NCQ2 148 aa12.08□□□□□ -0.48
CDC42EP3-201ENST00000295324 PCOTHQ58A44 107 aa12.07□□□□□ -0.48
CDC42EP3-201ENST00000295324 KRTAP10-3P60369 221 aa12.06□□□□□ -0.48
CDC42EP3-201ENST00000295324 MAST4O15021 2626 aa12.06□□□□□ -0.48
CDC42EP3-201ENST00000295324 UTRNP46939 3433 aa12.05□□□□□ -0.48
CDC42EP3-201ENST00000295324 Q6ZRP5 223 aa12.05□□□□□ -0.48
CDC42EP3-201ENST00000295324 GVQW2A0A096LPI5 108 aaPredicted RBP12.05□□□□□ -0.48
CDC42EP3-201ENST00000295324 KRTAP1-1Q07627 177 aa12.03□□□□□ -0.48
CDC42EP3-201ENST00000295324 FLNAP21333 2647 aaKnown RBP12.03□□□□□ -0.48
CDC42EP3-201ENST00000295324 H0Y9P7 68 aa12.03□□□□□ -0.48
CDC42EP3-201ENST00000295324 RETNLBQ9BQ08 111 aa12.02□□□□□ -0.49
CDC42EP3-201ENST00000295324 PHF5AQ7RTV0 110 aaKnown RBP12.01□□□□□ -0.49
CDC42EP3-201ENST00000295324 CEP350Q5VT06 3117 aa12.01□□□□□ -0.49
CDC42EP3-201ENST00000295324 SPINK1P00995 79 aa12□□□□□ -0.49
CDC42EP3-201ENST00000295324 TMEM254Q8TBM7 123 aa12□□□□□ -0.49
CDC42EP3-201ENST00000295324 CRYGAP11844 174 aa12□□□□□ -0.49
CDC42EP3-201ENST00000295324 KIAA0087Q14695 138 aa11.99□□□□□ -0.49
CDC42EP3-201ENST00000295324 ITPR3Q14573 2671 aa11.99□□□□□ -0.49
CDC42EP3-201ENST00000295324 ATRQ13535 2644 aa11.99□□□□□ -0.49
CDC42EP3-201ENST00000295324 MOBPQ13875 183 aa11.99□□□□□ -0.49
CDC42EP3-201ENST00000295324 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
CDC42EP3-201ENST00000295324 DEFB116Q30KQ4 102 aa11.98□□□□□ -0.49
CDC42EP3-201ENST00000295324 PLA2G1BP04054 148 aaKnown RBP11.97□□□□□ -0.49
CDC42EP3-201ENST00000295324 CFAP46Q8IYW2 2715 aa11.96□□□□□ -0.49
CDC42EP3-201ENST00000295324 TM2D3Q9BRN9 247 aa11.95□□□□□ -0.5
CDC42EP3-201ENST00000295324 HCG22E2RYF7 251 aa11.95□□□□□ -0.5
CDC42EP3-201ENST00000295324 LINC00846Q9NV44 126 aa11.94□□□□□ -0.5
CDC42EP3-201ENST00000295324 hDV103S1A0JD37 113 aa11.93□□□□□ -0.5
CDC42EP3-201ENST00000295324 CHD7Q9P2D1 2997 aa11.93□□□□□ -0.5
CDC42EP3-201ENST00000295324 ELOF1P60002 83 aaKnown RBP11.93□□□□□ -0.5
CDC42EP3-201ENST00000295324 Q6ZRX8 168 aa11.93□□□□□ -0.5
CDC42EP3-201ENST00000295324 TYMSOSQ8TAI1 123 aa11.92□□□□□ -0.5
CDC42EP3-201ENST00000295324 GIG44P09565 113 aaPredicted RBP11.92□□□□□ -0.5
CDC42EP3-201ENST00000295324 CHTF8P0CG12 524 aa11.92□□□□□ -0.5
CDC42EP3-201ENST00000295324 EPM2AB3EWF7 344 aa11.91□□□□□ -0.5
CDC42EP3-201ENST00000295324 PRO0628Q9UI54 55 aa11.9□□□□□ -0.5
CDC42EP3-201ENST00000295324 BCE1O60756 84 aa11.89□□□□□ -0.51
CDC42EP3-201ENST00000295324 Q8NBF4 154 aa11.89□□□□□ -0.51
CDC42EP3-201ENST00000295324 LINC00612Q8N6U2 182 aa11.88□□□□□ -0.51
CDC42EP3-201ENST00000295324 J3QL48 77 aa11.88□□□□□ -0.51
CDC42EP3-201ENST00000295324 CXCL6P80162 114 aa11.87□□□□□ -0.51
CDC42EP3-201ENST00000295324 RPL37AP61513 92 aaKnown RBP11.87□□□□□ -0.51
CDC42EP3-201ENST00000295324 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
CDC42EP3-201ENST00000295324 A0A1B0GW54 56 aa11.86□□□□□ -0.51
CDC42EP3-201ENST00000295324 CDIP1Q9H305 208 aa11.85□□□□□ -0.51
CDC42EP3-201ENST00000295324 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
CDC42EP3-201ENST00000295324 CENPEQ02224 2701 aa11.84□□□□□ -0.51
CDC42EP3-201ENST00000295324 VPREB1P12018 145 aa11.82□□□□□ -0.52
CDC42EP3-201ENST00000295324 SMIM29Q86T20 159 aa11.81□□□□□ -0.52
CDC42EP3-201ENST00000295324 LINC00476Q8WZB0 136 aa11.8□□□□□ -0.52
CDC42EP3-201ENST00000295324 CHD9Q3L8U1 2897 aa11.8□□□□□ -0.52
CDC42EP3-201ENST00000295324 IGKV2D-30A0A075B6S6 120 aa11.79□□□□□ -0.52
CDC42EP3-201ENST00000295324 IGKV2-30P06310 120 aa11.79□□□□□ -0.52
CDC42EP3-201ENST00000295324 A0A087WTM6 91 aa11.79□□□□□ -0.52
CDC42EP3-201ENST00000295324 A0A1B0GU69 56 aa11.78□□□□□ -0.52
CDC42EP3-201ENST00000295324 LINC00336Q6ZUF6 198 aa11.78□□□□□ -0.52
CDC42EP3-201ENST00000295324 BPTFQ12830 3046 aa11.78□□□□□ -0.52
CDC42EP3-201ENST00000295324 SERTAD4-AS1Q5TG53 156 aa11.77□□□□□ -0.53
CDC42EP3-201ENST00000295324 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.53
CDC42EP3-201ENST00000295324 C7orf65Q6ZTY9 151 aa11.76□□□□□ -0.53
CDC42EP3-201ENST00000295324 FAM218AQ96MZ4 157 aa11.76□□□□□ -0.53
CDC42EP3-201ENST00000295324 ZNF292O60281 2723 aa11.76□□□□□ -0.53
CDC42EP3-201ENST00000295324 APLNQ9ULZ1 77 aa11.76□□□□□ -0.53
CDC42EP3-201ENST00000295324 SPAG11AQ6PDA7 123 aa11.75□□□□□ -0.53
CDC42EP3-201ENST00000295324 FAM168BA1KXE4 195 aa11.75□□□□□ -0.53
CDC42EP3-201ENST00000295324 IGLV6-57P01721 117 aa11.75□□□□□ -0.53
CDC42EP3-201ENST00000295324 TP53AIP1Q9HCN2 124 aa11.74□□□□□ -0.53
CDC42EP3-201ENST00000295324 C9orf163Q8N9P6 203 aa11.73□□□□□ -0.53
CDC42EP3-201ENST00000295324 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
CDC42EP3-201ENST00000295324 IGLV1-50A0A075B6I6 118 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms