RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
CCDC78-201ENST00000293889 C9JAW5 83 aa11.71□□□□□ -0.53
CCDC78-201ENST00000293889 USP17L23D6RBM5 183 aa11.71□□□□□ -0.53
CCDC78-201ENST00000293889 RPL13AP40429 203 aaKnown RBP11.71□□□□□ -0.53
CCDC78-201ENST00000293889 Q1RN00 199 aa11.71□□□□□ -0.54
CCDC78-201ENST00000293889 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
CCDC78-201ENST00000293889 HERV-K104P63124 156 aa11.7□□□□□ -0.54
CCDC78-201ENST00000293889 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
CCDC78-201ENST00000293889 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
CCDC78-201ENST00000293889 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
CCDC78-201ENST00000293889 COX6CP09669 75 aa11.69□□□□□ -0.54
CCDC78-201ENST00000293889 FAT2Q9NYQ8 4349 aa11.69□□□□□ -0.54
CCDC78-201ENST00000293889 H3BT86 120 aa11.68□□□□□ -0.54
CCDC78-201ENST00000293889 HIGD2BQ4VC39 106 aa11.68□□□□□ -0.54
CCDC78-201ENST00000293889 LINC00308Q8TCZ7 52 aa11.68□□□□□ -0.54
CCDC78-201ENST00000293889 TOMM7Q9P0U1 55 aa11.68□□□□□ -0.54
CCDC78-201ENST00000293889 GVQW2A0A096LPI5 108 aaPredicted RBP11.68□□□□□ -0.54
CCDC78-201ENST00000293889 H7C2G1 150 aa11.68□□□□□ -0.54
CCDC78-201ENST00000293889 SPAG11BQ08648 103 aa11.68□□□□□ -0.54
CCDC78-201ENST00000293889 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
CCDC78-201ENST00000293889 LST1O00453 97 aa11.67□□□□□ -0.54
CCDC78-201ENST00000293889 KIAA0087Q14695 138 aa11.67□□□□□ -0.54
CCDC78-201ENST00000293889 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
CCDC78-201ENST00000293889 A0A087WTM6 91 aa11.65□□□□□ -0.54
CCDC78-201ENST00000293889 Q8IZM0 81 aa11.65□□□□□ -0.54
CCDC78-201ENST00000293889 ZNF561-AS1K7EIQ3 104 aa11.64□□□□□ -0.55
CCDC78-201ENST00000293889 TNP2Q05952 138 aa11.64□□□□□ -0.55
CCDC78-201ENST00000293889 C6orf226Q5I0X4 101 aa11.64□□□□□ -0.55
CCDC78-201ENST00000293889 LINC00336Q6ZUF6 198 aa11.63□□□□□ -0.55
CCDC78-201ENST00000293889 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
CCDC78-201ENST00000293889 XGP55808 180 aa11.62□□□□□ -0.55
CCDC78-201ENST00000293889 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
CCDC78-201ENST00000293889 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
CCDC78-201ENST00000293889 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
CCDC78-201ENST00000293889 MT-ATP8P03928 68 aa11.6□□□□□ -0.55
CCDC78-201ENST00000293889 SLPIP03973 132 aa11.6□□□□□ -0.55
CCDC78-201ENST00000293889 CKS1BP61024 79 aa11.6□□□□□ -0.55
CCDC78-201ENST00000293889 Q8N814 137 aa11.6□□□□□ -0.55
CCDC78-201ENST00000293889 C2orf48Q96LS8 159 aa11.6□□□□□ -0.55
CCDC78-201ENST00000293889 NPC2P61916 151 aa11.6□□□□□ -0.55
CCDC78-201ENST00000293889 PKD1P98161 4303 aa11.59□□□□□ -0.55
CCDC78-201ENST00000293889 C10orf25Q5T742 122 aa11.59□□□□□ -0.55
CCDC78-201ENST00000293889 UNQ6190/PRO20217Q6UXQ8 127 aa11.59□□□□□ -0.55
CCDC78-201ENST00000293889 DAND5Q8N907 189 aa11.59□□□□□ -0.55
CCDC78-201ENST00000293889 CAMK2N2Q96S95 79 aa11.59□□□□□ -0.55
CCDC78-201ENST00000293889 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.58□□□□□ -0.56
CCDC78-201ENST00000293889 A0A1B0GV72 72 aa11.58□□□□□ -0.56
CCDC78-201ENST00000293889 CXCL5P42830 114 aa11.58□□□□□ -0.56
CCDC78-201ENST00000293889 A0A1B0GVY2 172 aa11.57□□□□□ -0.56
CCDC78-201ENST00000293889 F8WDY8 70 aa11.57□□□□□ -0.56
CCDC78-201ENST00000293889 Q6ZRU5 148 aa11.57□□□□□ -0.56
CCDC78-201ENST00000293889 EPPK1P58107 5090 aaKnown RBP11.57□□□□□ -0.56
CCDC78-201ENST00000293889 SYCNQ0VAF6 134 aa11.57□□□□□ -0.56
CCDC78-201ENST00000293889 MEIG1Q5JSS6 88 aa11.57□□□□□ -0.56
CCDC78-201ENST00000293889 CLEC2BQ92478 149 aa11.57□□□□□ -0.56
CCDC78-201ENST00000293889 HECTD4Q9Y4D8 3996 aa11.56□□□□□ -0.56
CCDC78-201ENST00000293889 FAM240AA0A1B0GVK7 77 aa11.56□□□□□ -0.56
CCDC78-201ENST00000293889 CNBPP62633 177 aaKnown RBP11.55□□□□□ -0.56
CCDC78-201ENST00000293889 DNAH11Q96DT5 4516 aa11.55□□□□□ -0.56
CCDC78-201ENST00000293889 TEX49A0A1B0GTD5 131 aa11.54□□□□□ -0.56
CCDC78-201ENST00000293889 TRACP01848 142 aa11.54□□□□□ -0.56
CCDC78-201ENST00000293889 C6orf48Q9UBA6 75 aa11.54□□□□□ -0.56
CCDC78-201ENST00000293889 Q6Q795 121 aa11.53□□□□□ -0.56
CCDC78-201ENST00000293889 TRAV13-2A0A0B4J235 113 aa11.53□□□□□ -0.56
CCDC78-201ENST00000293889 FUSP35637 526 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC78-201ENST00000293889 C9orf116Q5BN46 136 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-201ENST00000293889 RPL28P46779 137 aaKnown RBP11.52□□□□□ -0.57
CCDC78-201ENST00000293889 KRTAP10-2P60368 255 aa11.49□□□□□ -0.57
CCDC78-201ENST00000293889 PKHD1P08F94 4074 aa11.49□□□□□ -0.57
CCDC78-201ENST00000293889 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
CCDC78-201ENST00000293889 PFN2P35080 140 aa11.48□□□□□ -0.57
CCDC78-201ENST00000293889 MIR7-3HGQ8N6C7 128 aa11.47□□□□□ -0.57
CCDC78-201ENST00000293889 C9orf163Q8N9P6 203 aa11.47□□□□□ -0.57
CCDC78-201ENST00000293889 IGLV5-52A0A0A0MRZ9 124 aa11.46□□□□□ -0.57
CCDC78-201ENST00000293889 ACYP1P07311 99 aa11.46□□□□□ -0.57
CCDC78-201ENST00000293889 IGKV2-28A0A075B6P5 120 aa11.46□□□□□ -0.58
CCDC78-201ENST00000293889 IGKV2D-28P01615 120 aa11.46□□□□□ -0.58
CCDC78-201ENST00000293889 SNCGO76070 127 aa11.45□□□□□ -0.58
CCDC78-201ENST00000293889 LINC00158P58513 81 aa11.45□□□□□ -0.58
CCDC78-201ENST00000293889 COX17Q14061 63 aa11.45□□□□□ -0.58
CCDC78-201ENST00000293889 SND1-IT1Q9HBX3 110 aa11.44□□□□□ -0.58
CCDC78-201ENST00000293889 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
CCDC78-201ENST00000293889 LINC00337Q8N6G1 96 aa11.43□□□□□ -0.58
CCDC78-201ENST00000293889 TLX1NBP0CAT3 122 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 GAGE2EQ4V326 116 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 Q6ZRP5 223 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 GAGE2DQ9UEU5 116 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 DNAH5Q8TE73 4624 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 SDIM1Q6ZPB5 146 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 C22orf24Q9Y442 160 aa11.42□□□□□ -0.58
CCDC78-201ENST00000293889 H0YGX0 51 aa11.41□□□□□ -0.58
CCDC78-201ENST00000293889 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
CCDC78-201ENST00000293889 FAM218AQ96MZ4 157 aa11.41□□□□□ -0.58
CCDC78-201ENST00000293889 BAALC-AS2P0C853 105 aa11.4□□□□□ -0.58
CCDC78-201ENST00000293889 A0A096LNI7 61 aa11.38□□□□□ -0.59
CCDC78-201ENST00000293889 TRBV7-7A0A0K0K1E9 115 aa11.38□□□□□ -0.59
CCDC78-201ENST00000293889 DYNC1H1Q14204 4646 aaKnown RBP11.37□□□□□ -0.59
CCDC78-201ENST00000293889 SMIM11BQ8TCY0 68 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms