RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 KRTAP11-1Q8IUC1 163 aa1.59□□□□□ -2.15
CHD1-201ENST00000284049 HECTD1Q9ULT8 2610 aa1.59□□□□□ -2.15
CHD1-201ENST00000284049 RPS27LQ71UM5 84 aaKnown RBP1.59□□□□□ -2.15
CHD1-201ENST00000284049 Q86TA4 180 aa1.59□□□□□ -2.15
CHD1-201ENST00000284049 LINC00322Q6ZN03 302 aaPredicted RBP1.59□□□□□ -2.15
CHD1-201ENST00000284049 A0A0G2JND7 137 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 NCR3O14931 201 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 PDE6HQ13956 83 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 H3BUT2 72 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 CAV3P56539 151 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.59□□□□□ -2.16
CHD1-201ENST00000284049 BVES-AS1Q5T3Y7 98 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 LCE4AQ5TA78 99 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 Q6ZQY7 126 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 C22orf24Q9Y442 160 aa1.59□□□□□ -2.16
CHD1-201ENST00000284049 CCDC168Q8NDH2 2452 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 POLQO75417 2590 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 BOD1L1Q8NFC6 3051 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 KRTAP1-1Q07627 177 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 MXRA5Q9NR99 2828 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 BSNQ9UPA5 3926 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 ATMQ13315 3056 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 BAGE2Q86Y30 109 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 HIVEP1P15822 2718 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 FASNP49327 2511 aaKnown RBP1.58□□□□□ -2.16
CHD1-201ENST00000284049 LENEPQ9Y5L5 61 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 IGHV3-33P01772 117 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 SPAG11BQ08648 103 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 SPAG11AQ6PDA7 123 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 COX7B2Q8TF08 81 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 USP34Q70CQ2 3546 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 TEX49A0A1B0GTD5 131 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 ABRACLQ9P1F3 81 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 VPS13AQ96RL7 3174 aa1.58□□□□□ -2.16
CHD1-201ENST00000284049 A0A0C4DFX4 3053 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 PIN1P1O15428 100 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 RPL37AP61513 92 aaKnown RBP1.57□□□□□ -2.16
CHD1-201ENST00000284049 RP1L1Q8IWN7 2480 aaPredicted RBP1.57□□□□□ -2.16
CHD1-201ENST00000284049 MYMXA0A1B0GTQ4 84 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 A8MTW9 85 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 FXYD4P59646 89 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 DEFB110Q30KQ9 67 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 LCE5AQ5TCM9 118 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 Q8N6K4 173 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 LRBAP50851 2863 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 VCANP13611 3396 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 NF1P21359 2839 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 Q5BKY6 102 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 C9orf163Q8N9P6 203 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 CFAP126Q5VTH2 177 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 C18orf32Q8TCD1 76 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 UTP20O75691 2785 aaKnown RBP1.57□□□□□ -2.16
CHD1-201ENST00000284049 SPEGQ15772 3267 aa1.57□□□□□ -2.16
CHD1-201ENST00000284049 GNG13Q9P2W3 67 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 DMBT1Q9UGM3 2413 aaPredicted RBP1.56□□□□□ -2.16
CHD1-201ENST00000284049 FREM2Q5SZK8 3169 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 EFNA4P52798 201 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 UBE2D3P61077 147 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 UBE2D2P62837 147 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 TRBV6-5A0A0K0K1A5 114 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 TEP1Q99973 2627 aaKnown RBP1.56□□□□□ -2.16
CHD1-201ENST00000284049 WDFY3Q8IZQ1 3526 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 IGKV3D-7A0A0C4DH55 119 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 IGKV3OR2-268A0A0C4DH90 116 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 LOC101927531A0A1B0GV80 90 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 NMSQ5H8A3 153 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 HIGD1BQ9P298 99 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 ARL2-SNX15V9GYD0 113 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 CR1P17927 2039 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 NUPR2A6NF83 97 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 SMIM4Q8WVI0 70 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 AMELXQ99217 191 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 TEX15Q9BXT5 2789 aa1.56□□□□□ -2.16
CHD1-201ENST00000284049 NOTCH3Q9UM47 2321 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 M0R1W7 72 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 SAA2P0DJI9 122 aaPredicted RBP1.55□□□□□ -2.16
CHD1-201ENST00000284049 ZNF56Q15929 161 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 C6orf201Q7Z4U5 140 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 FLNBO75369 2602 aaKnown RBP1.55□□□□□ -2.16
CHD1-201ENST00000284049 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
CHD1-201ENST00000284049 H7BZZ5 65 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 HCP5Q6MZN7 132 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 ZFHX4Q86UP3 3567 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 SMIM13P0DJ93 91 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 PDE6GP18545 87 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 BAGE3Q86Y29 109 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 DCHS2Q6V1P9 2916 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 FLNAP21333 2647 aaKnown RBP1.55□□□□□ -2.16
CHD1-201ENST00000284049 USF3Q68DE3 2245 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 NDUFA3O95167 84 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 WFDC2Q14508 124 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 LCE3BQ5TA77 95 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 CSAG1Q6PB30 78 aa1.55□□□□□ -2.16
CHD1-201ENST00000284049 ZANQ9Y493 2812 aa1.54□□□□□ -2.16
CHD1-201ENST00000284049 CNBPP62633 177 aaKnown RBP1.54□□□□□ -2.16
CHD1-201ENST00000284049 C10orf55Q5SWW7 151 aa1.54□□□□□ -2.16
CHD1-201ENST00000284049 GDF5OSQ5U4N7 250 aa1.54□□□□□ -2.16
CHD1-201ENST00000284049 NDUFA4L2Q9NRX3 87 aa1.54□□□□□ -2.16
CHD1-201ENST00000284049 NIPBLQ6KC79 2804 aaeCLIP1.54□□□□□ -2.163e-6■■□□□ 12.8
CHD1-201ENST00000284049 TRBV25-1A0A075B6N4 114 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms