RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 ZNF861PO60384 105 aa7.31□□□□□ -1.24
MRPS28-201ENST00000276585 KRTAP4-12Q9BQ66 201 aa7.31□□□□□ -1.24
MRPS28-201ENST00000276585 CHTOPQ9Y3Y2 248 aaKnown RBP7.31□□□□□ -1.24
MRPS28-201ENST00000276585 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 RPL37AP8A6NKH3 93 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 VPREB1P12018 145 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 PFN2P35080 140 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 KRTAP13-1Q8IUC0 172 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 IFI27L1Q96BM0 104 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 ERG28Q9UKR5 140 aa7.3□□□□□ -1.24
MRPS28-201ENST00000276585 IGLV1-50A0A075B6I6 118 aa7.29□□□□□ -1.24
MRPS28-201ENST00000276585 TMEM223A0PJW6 202 aa7.29□□□□□ -1.24
MRPS28-201ENST00000276585 BCE1O60756 84 aa7.29□□□□□ -1.24
MRPS28-201ENST00000276585 TRGC2P03986 189 aa7.29□□□□□ -1.24
MRPS28-201ENST00000276585 FAM19A2Q8N3H0 131 aa7.29□□□□□ -1.24
MRPS28-201ENST00000276585 SND1-IT1Q9HBX3 110 aa7.29□□□□□ -1.24
MRPS28-201ENST00000276585 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
MRPS28-201ENST00000276585 COLCA2A8K830 154 aa7.26□□□□□ -1.25
MRPS28-201ENST00000276585 HSBP1O75506 76 aa7.26□□□□□ -1.25
MRPS28-201ENST00000276585 SERF1AO75920 110 aa7.26□□□□□ -1.25
MRPS28-201ENST00000276585 COX17Q14061 63 aa7.26□□□□□ -1.25
MRPS28-201ENST00000276585 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
MRPS28-201ENST00000276585 NKAPP1Q8N9T2 125 aa7.26□□□□□ -1.25
MRPS28-201ENST00000276585 A0A087X002 238 aa7.25□□□□□ -1.25
MRPS28-201ENST00000276585 IGKV2-28A0A075B6P5 120 aa7.24□□□□□ -1.25
MRPS28-201ENST00000276585 IGKV2D-28P01615 120 aa7.24□□□□□ -1.25
MRPS28-201ENST00000276585 RPL28P46779 137 aaKnown RBP7.24□□□□□ -1.25
MRPS28-201ENST00000276585 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
MRPS28-201ENST00000276585 TMEM238C9JI98 176 aa7.23□□□□□ -1.25
MRPS28-201ENST00000276585 TSPEAR-AS2P59090 65 aa7.23□□□□□ -1.25
MRPS28-201ENST00000276585 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
MRPS28-201ENST00000276585 TMEM126AQ9H061 195 aa7.22□□□□□ -1.25
MRPS28-201ENST00000276585 A0A0U1RRA0 63 aa7.21□□□□□ -1.26
MRPS28-201ENST00000276585 M0R378 163 aa7.21□□□□□ -1.26
MRPS28-201ENST00000276585 SMIM13P0DJ93 91 aa7.21□□□□□ -1.26
MRPS28-201ENST00000276585 PRLHP81277 87 aa7.21□□□□□ -1.26
MRPS28-201ENST00000276585 ANAPC11Q9NYG5 84 aa7.21□□□□□ -1.26
MRPS28-201ENST00000276585 H0Y8G0 127 aa7.2□□□□□ -1.26
MRPS28-201ENST00000276585 LEPROTL1O95214 131 aa7.2□□□□□ -1.26
MRPS28-201ENST00000276585 LINC00158P58513 81 aa7.2□□□□□ -1.26
MRPS28-201ENST00000276585 KRTAP13-2Q52LG2 175 aa7.2□□□□□ -1.26
MRPS28-201ENST00000276585 TSPAN13O95857 204 aa7.19□□□□□ -1.26
MRPS28-201ENST00000276585 UBE2AP49459 152 aa7.19□□□□□ -1.26
MRPS28-201ENST00000276585 RPL24P83731 157 aaKnown RBP7.19□□□□□ -1.26
MRPS28-201ENST00000276585 NDUFA12Q9UI09 145 aa7.19□□□□□ -1.26
MRPS28-201ENST00000276585 GHRHP01286 108 aa7.18□□□□□ -1.26
MRPS28-201ENST00000276585 MIR7-3HGQ8N6C7 128 aa7.18□□□□□ -1.26
MRPS28-201ENST00000276585 PMCHL2Q9BQD1 86 aa7.18□□□□□ -1.26
MRPS28-201ENST00000276585 CDIP1Q9H305 208 aa7.18□□□□□ -1.26
MRPS28-201ENST00000276585 FABP4P15090 132 aa7.17□□□□□ -1.26
MRPS28-201ENST00000276585 HERV-K104P63124 156 aa7.17□□□□□ -1.26
MRPS28-201ENST00000276585 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
MRPS28-201ENST00000276585 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
MRPS28-201ENST00000276585 LEPROTO15243 131 aa7.16□□□□□ -1.26
MRPS28-201ENST00000276585 CRYGAP11844 174 aa7.16□□□□□ -1.26
MRPS28-201ENST00000276585 PLNP26678 52 aa7.16□□□□□ -1.26
MRPS28-201ENST00000276585 MEIG1Q5JSS6 88 aa7.16□□□□□ -1.26
MRPS28-201ENST00000276585 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
MRPS28-201ENST00000276585 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
MRPS28-201ENST00000276585 HSPB8Q9UJY1 196 aa7.16□□□□□ -1.26
MRPS28-201ENST00000276585 NCR3O14931 201 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BKO60814 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 DPM2O94777 84 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BJP06899 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BOP23527 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BBP33778 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BDP58876 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BCP62807 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST2H2BEQ16778 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.15□□□□□ -1.26
MRPS28-201ENST00000276585 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BHQ93079 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BNQ99877 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 HIST1H2BMQ99879 126 aa7.15□□□□□ -1.26
MRPS28-201ENST00000276585 MYMXA0A1B0GTQ4 84 aa7.14□□□□□ -1.27
MRPS28-201ENST00000276585 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
MRPS28-201ENST00000276585 J3QQQ9 107 aa7.14□□□□□ -1.27
MRPS28-201ENST00000276585 SPRR1AP35321 89 aa7.14□□□□□ -1.27
MRPS28-201ENST00000276585 DAND5Q8N907 189 aa7.14□□□□□ -1.27
MRPS28-201ENST00000276585 TYMSOSQ8TAI1 123 aa7.14□□□□□ -1.27
MRPS28-201ENST00000276585 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
MRPS28-201ENST00000276585 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
MRPS28-201ENST00000276585 PRYO14603 147 aa7.13□□□□□ -1.27
MRPS28-201ENST00000276585 IGKCP01834 107 aa7.13□□□□□ -1.27
MRPS28-201ENST00000276585 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
MRPS28-201ENST00000276585 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
MRPS28-201ENST00000276585 TMA7Q9Y2S6 64 aaKnown RBP7.12□□□□□ -1.27
MRPS28-201ENST00000276585 IGKV2D-26A0A0A0MRZ7 120 aa7.11□□□□□ -1.27
MRPS28-201ENST00000276585 TRBV10-3A0A0K0K1G6 114 aa7.11□□□□□ -1.27
MRPS28-201ENST00000276585 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
MRPS28-201ENST00000276585 HIGD2AQ9BW72 106 aa7.11□□□□□ -1.27
MRPS28-201ENST00000276585 LINC00587B1AMM8 73 aa7.1□□□□□ -1.27
MRPS28-201ENST00000276585 SYS1-DBNDD2H3BUS1 97 aa7.1□□□□□ -1.27
MRPS28-201ENST00000276585 NMUP48645 174 aa7.1□□□□□ -1.27
MRPS28-201ENST00000276585 HERVK_113P61574 105 aa7.1□□□□□ -1.27
MRPS28-201ENST00000276585 SOSTDC1Q6X4U4 206 aa7.1□□□□□ -1.27
MRPS28-201ENST00000276585 LINC00337Q8N6G1 96 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 252.8 ms