RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 Q6ZRU5 148 aa9.72□□□□□ -0.85
LIMD2-201ENST00000259006 PSPHP1O15172 72 aa9.72□□□□□ -0.85
LIMD2-201ENST00000259006 Q6YL49 198 aa9.71□□□□□ -0.86
LIMD2-201ENST00000259006 OVOL2Q9BRP0 275 aa9.71□□□□□ -0.86
LIMD2-201ENST00000259006 CR1P17927 2039 aa9.7□□□□□ -0.86
LIMD2-201ENST00000259006 A0A096LNT2 108 aa9.7□□□□□ -0.86
LIMD2-201ENST00000259006 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
LIMD2-201ENST00000259006 SMR3AQ99954 134 aa9.69□□□□□ -0.86
LIMD2-201ENST00000259006 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
LIMD2-201ENST00000259006 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
LIMD2-201ENST00000259006 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
LIMD2-201ENST00000259006 ESM1Q9NQ30 184 aa9.69□□□□□ -0.86
LIMD2-201ENST00000259006 A8MTW9 85 aa9.68□□□□□ -0.86
LIMD2-201ENST00000259006 NDUFC1O43677 76 aa9.68□□□□□ -0.86
LIMD2-201ENST00000259006 OTOGQ6ZRI0 2925 aa9.67□□□□□ -0.86
LIMD2-201ENST00000259006 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
LIMD2-201ENST00000259006 Q8N3U1 123 aa9.67□□□□□ -0.86
LIMD2-201ENST00000259006 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
LIMD2-201ENST00000259006 A8MU10 97 aa9.67□□□□□ -0.86
LIMD2-201ENST00000259006 RBM12B-AS1Q9P1G2 102 aa9.67□□□□□ -0.86
LIMD2-201ENST00000259006 KRTAP1-3Q8IUG1 177 aa9.66□□□□□ -0.86
LIMD2-201ENST00000259006 TMEM254Q8TBM7 123 aa9.66□□□□□ -0.86
LIMD2-201ENST00000259006 H0YGX0 51 aa9.65□□□□□ -0.86
LIMD2-201ENST00000259006 C4orf3Q8WVX3 66 aa9.65□□□□□ -0.86
LIMD2-201ENST00000259006 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
LIMD2-201ENST00000259006 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.86
LIMD2-201ENST00000259006 F8P00451 2351 aa9.65□□□□□ -0.86
LIMD2-201ENST00000259006 TRBV10-3A0A0K0K1G6 114 aa9.65□□□□□ -0.87
LIMD2-201ENST00000259006 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.87
LIMD2-201ENST00000259006 LINC01547P58512 204 aaPredicted RBP9.65□□□□□ -0.87
LIMD2-201ENST00000259006 PF4P02776 101 aa9.64□□□□□ -0.87
LIMD2-201ENST00000259006 HIVEP1P15822 2718 aa9.64□□□□□ -0.87
LIMD2-201ENST00000259006 TRBV6-8A0A0A6YYG3 113 aa9.63□□□□□ -0.87
LIMD2-201ENST00000259006 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
LIMD2-201ENST00000259006 CCL24O00175 119 aa9.63□□□□□ -0.87
LIMD2-201ENST00000259006 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
LIMD2-201ENST00000259006 M0R2N4 97 aa9.63□□□□□ -0.87
LIMD2-201ENST00000259006 NREPQ16612 68 aa9.63□□□□□ -0.87
LIMD2-201ENST00000259006 DEFB4AO15263 64 aa9.62□□□□□ -0.87
LIMD2-201ENST00000259006 LINC00959A0A1B0GUT2 108 aa9.61□□□□□ -0.87
LIMD2-201ENST00000259006 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
LIMD2-201ENST00000259006 GIG44P09565 113 aaPredicted RBP9.61□□□□□ -0.87
LIMD2-201ENST00000259006 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
LIMD2-201ENST00000259006 FAM19A3Q7Z5A8 133 aa9.6□□□□□ -0.87
LIMD2-201ENST00000259006 ATRQ13535 2644 aa9.6□□□□□ -0.87
LIMD2-201ENST00000259006 GYPEP15421 78 aa9.6□□□□□ -0.87
LIMD2-201ENST00000259006 LAMTOR3Q9UHA4 124 aa9.6□□□□□ -0.87
LIMD2-201ENST00000259006 LINC00269Q8N2A0 174 aa9.59□□□□□ -0.87
LIMD2-201ENST00000259006 BCE1O60756 84 aa9.59□□□□□ -0.87
LIMD2-201ENST00000259006 Q6ZVQ6 151 aa9.59□□□□□ -0.87
LIMD2-201ENST00000259006 PRYO14603 147 aa9.58□□□□□ -0.88
LIMD2-201ENST00000259006 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
LIMD2-201ENST00000259006 Q6ZRP5 223 aa9.58□□□□□ -0.88
LIMD2-201ENST00000259006 BAHCC1Q9P281 2608 aa9.58□□□□□ -0.88
LIMD2-201ENST00000259006 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
LIMD2-201ENST00000259006 C16orf74Q96GX8 76 aa9.56□□□□□ -0.88
LIMD2-201ENST00000259006 APOC4P55056 127 aa9.56□□□□□ -0.88
LIMD2-201ENST00000259006 SPATA3Q8NHX4 192 aa9.56□□□□□ -0.88
LIMD2-201ENST00000259006 Q8N814 137 aa9.55□□□□□ -0.88
LIMD2-201ENST00000259006 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
LIMD2-201ENST00000259006 NANOS2P60321 138 aaKnown RBP9.54□□□□□ -0.88
LIMD2-201ENST00000259006 Q6ZTC4 211 aa9.54□□□□□ -0.88
LIMD2-201ENST00000259006 Q8NDZ9 215 aa9.54□□□□□ -0.88
LIMD2-201ENST00000259006 BPY2O14599 106 aa9.54□□□□□ -0.88
LIMD2-201ENST00000259006 NSD1Q96L73 2696 aaPredicted RBP9.54□□□□□ -0.88
LIMD2-201ENST00000259006 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
LIMD2-201ENST00000259006 Q8N9L7 120 aa9.53□□□□□ -0.88
LIMD2-201ENST00000259006 TMEM256-PLSCR3K7ERE1 68 aa9.53□□□□□ -0.88
LIMD2-201ENST00000259006 VWFP04275 2813 aa9.53□□□□□ -0.88
LIMD2-201ENST00000259006 DNAJC9-AS1A6NH13 148 aa9.53□□□□□ -0.88
LIMD2-201ENST00000259006 PRR4Q16378 134 aa9.53□□□□□ -0.88
LIMD2-201ENST00000259006 KTN1-AS1Q86SY8 53 aa9.52□□□□□ -0.89
LIMD2-201ENST00000259006 A8MUN3 132 aa9.52□□□□□ -0.89
LIMD2-201ENST00000259006 HTN3P15516 51 aa9.52□□□□□ -0.89
LIMD2-201ENST00000259006 TRAV22A0A0B4J277 110 aa9.51□□□□□ -0.89
LIMD2-201ENST00000259006 FSHBP01225 129 aa9.51□□□□□ -0.89
LIMD2-201ENST00000259006 H3BS24 57 aa9.51□□□□□ -0.89
LIMD2-201ENST00000259006 Q6ZQT0 140 aa9.5□□□□□ -0.89
LIMD2-201ENST00000259006 C10orf25Q5T742 122 aa9.49□□□□□ -0.89
LIMD2-201ENST00000259006 hDV103S1A0JD37 113 aa9.49□□□□□ -0.89
LIMD2-201ENST00000259006 KRTAP1-1Q07627 177 aa9.49□□□□□ -0.89
LIMD2-201ENST00000259006 LY6G6DO95868 133 aa9.49□□□□□ -0.89
LIMD2-201ENST00000259006 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
LIMD2-201ENST00000259006 CHCHD10Q8WYQ3 142 aaPredicted RBP9.49□□□□□ -0.89
LIMD2-201ENST00000259006 LINC01006Q8NI28 216 aa9.48□□□□□ -0.89
LIMD2-201ENST00000259006 XAGE1AQ9HD64 81 aa9.48□□□□□ -0.89
LIMD2-201ENST00000259006 INAFM1C9JVW0 142 aa9.48□□□□□ -0.89
LIMD2-201ENST00000259006 C1orf64Q8NEQ6 169 aa9.48□□□□□ -0.89
LIMD2-201ENST00000259006 CSNK1G2-AS1Q8NCQ2 148 aa9.47□□□□□ -0.89
LIMD2-201ENST00000259006 M0R378 163 aa9.47□□□□□ -0.89
LIMD2-201ENST00000259006 Q1T7F1 81 aa9.47□□□□□ -0.89
LIMD2-201ENST00000259006 Q6ZQY7 126 aa9.47□□□□□ -0.89
LIMD2-201ENST00000259006 MAST4O15021 2626 aa9.46□□□□□ -0.89
LIMD2-201ENST00000259006 Q8IZM0 81 aa9.46□□□□□ -0.89
LIMD2-201ENST00000259006 SYCNQ0VAF6 134 aa9.46□□□□□ -0.9
LIMD2-201ENST00000259006 TENM1Q9UKZ4 2725 aa9.45□□□□□ -0.9
LIMD2-201ENST00000259006 LINC00588Q9Y4M8 146 aa9.45□□□□□ -0.9
LIMD2-201ENST00000259006 C19orf73Q9NVV2 129 aa9.45□□□□□ -0.9
LIMD2-201ENST00000259006 REG3AQ06141 175 aa9.44□□□□□ -0.9
LIMD2-201ENST00000259006 ANK3Q12955 4377 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms