RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 LINC00167Q96N53 147 aa10.7□□□□□ -0.7
KNSTRN-201ENST00000249776 IGKV3OR2-268A0A0C4DH90 116 aa10.69□□□□□ -0.7
KNSTRN-201ENST00000249776 H3BQ85 93 aa10.69□□□□□ -0.7
KNSTRN-201ENST00000249776 LECT2O14960 151 aa10.69□□□□□ -0.7
KNSTRN-201ENST00000249776 RPL35AP18077 110 aaKnown RBP10.69□□□□□ -0.7
KNSTRN-201ENST00000249776 TMEM256-PLSCR3K7ERE1 68 aa10.68□□□□□ -0.7
KNSTRN-201ENST00000249776 PFN2P35080 140 aa10.68□□□□□ -0.7
KNSTRN-201ENST00000249776 SMIM20Q8N5G0 67 aa10.68□□□□□ -0.7
KNSTRN-201ENST00000249776 CRYGAP11844 174 aa10.67□□□□□ -0.7
KNSTRN-201ENST00000249776 RPL18AQ02543 176 aaKnown RBP10.67□□□□□ -0.7
KNSTRN-201ENST00000249776 CCKP06307 115 aa10.66□□□□□ -0.7
KNSTRN-201ENST00000249776 CFAP161Q6P656 301 aa10.66□□□□□ -0.7
KNSTRN-201ENST00000249776 C14orf132Q9NPU4 83 aa10.66□□□□□ -0.7
KNSTRN-201ENST00000249776 PRO0255Q9UI72 69 aa10.65□□□□□ -0.7
KNSTRN-201ENST00000249776 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
KNSTRN-201ENST00000249776 GYPEP15421 78 aa10.63□□□□□ -0.71
KNSTRN-201ENST00000249776 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
KNSTRN-201ENST00000249776 CD164L2Q6UWJ8 174 aa10.63□□□□□ -0.71
KNSTRN-201ENST00000249776 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
KNSTRN-201ENST00000249776 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
KNSTRN-201ENST00000249776 SERP2Q8N6R1 65 aa10.61□□□□□ -0.71
KNSTRN-201ENST00000249776 Q8N814 137 aa10.61□□□□□ -0.71
KNSTRN-201ENST00000249776 GHRHP01286 108 aa10.61□□□□□ -0.71
KNSTRN-201ENST00000249776 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
KNSTRN-201ENST00000249776 C2orf48Q96LS8 159 aa10.61□□□□□ -0.71
KNSTRN-201ENST00000249776 LINC00846Q9NV44 126 aa10.61□□□□□ -0.71
KNSTRN-201ENST00000249776 XCL1P47992 114 aa10.6□□□□□ -0.71
KNSTRN-201ENST00000249776 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
KNSTRN-201ENST00000249776 LCE6AA0A183 80 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 hADV29S1A0JD25 119 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 J3KT08 172 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 RYR3Q15413 4870 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 A0A0J9YWU9 116 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 NCR3O14931 201 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 BCE1O60756 84 aa10.58□□□□□ -0.72
KNSTRN-201ENST00000249776 STARD9Q9P2P6 4700 aa10.57□□□□□ -0.72
KNSTRN-201ENST00000249776 TMEM258P61165 79 aa10.57□□□□□ -0.72
KNSTRN-201ENST00000249776 PDE6GP18545 87 aa10.56□□□□□ -0.72
KNSTRN-201ENST00000249776 UBL5Q9BZL1 73 aa10.56□□□□□ -0.72
KNSTRN-201ENST00000249776 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
KNSTRN-201ENST00000249776 LYPD5Q6UWN5 251 aa10.55□□□□□ -0.72
KNSTRN-201ENST00000249776 DYNC2H1Q8NCM8 4307 aaKnown RBP10.54□□□□□ -0.72
KNSTRN-201ENST00000249776 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
KNSTRN-201ENST00000249776 KIAA0087Q14695 138 aa10.54□□□□□ -0.72
KNSTRN-201ENST00000249776 C11orf68Q9H3H3 251 aaKnown RBP10.54□□□□□ -0.72
KNSTRN-201ENST00000249776 NUPR2A6NF83 97 aa10.53□□□□□ -0.72
KNSTRN-201ENST00000249776 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
KNSTRN-201ENST00000249776 SLPIP03973 132 aa10.53□□□□□ -0.72
KNSTRN-201ENST00000249776 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
KNSTRN-201ENST00000249776 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
KNSTRN-201ENST00000249776 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.73
KNSTRN-201ENST00000249776 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.73
KNSTRN-201ENST00000249776 X6R8D5 127 aa10.52□□□□□ -0.73
KNSTRN-201ENST00000249776 REG3AQ06141 175 aa10.51□□□□□ -0.73
KNSTRN-201ENST00000249776 LOC110117498A0A087WWA1 95 aa10.5□□□□□ -0.73
KNSTRN-201ENST00000249776 LINC00575Q6W349 94 aa10.5□□□□□ -0.73
KNSTRN-201ENST00000249776 LINC00269Q8N2A0 174 aa10.5□□□□□ -0.73
KNSTRN-201ENST00000249776 LYSTQ99698 3801 aa10.5□□□□□ -0.73
KNSTRN-201ENST00000249776 ANGP03950 147 aaKnown RBP10.5□□□□□ -0.73
KNSTRN-201ENST00000249776 RBM3P98179 157 aaKnown RBP10.5□□□□□ -0.73
KNSTRN-201ENST00000249776 RYR2Q92736 4967 aa10.49□□□□□ -0.73
KNSTRN-201ENST00000249776 MIFP14174 115 aa10.49□□□□□ -0.73
KNSTRN-201ENST00000249776 GVQW2A0A096LPI5 108 aaPredicted RBP10.47□□□□□ -0.73
KNSTRN-201ENST00000249776 C6orf99Q4VX62 202 aa10.47□□□□□ -0.73
KNSTRN-201ENST00000249776 C6orf223Q8N319 242 aa10.47□□□□□ -0.73
KNSTRN-201ENST00000249776 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
KNSTRN-201ENST00000249776 DAD1P61803 113 aa10.47□□□□□ -0.73
KNSTRN-201ENST00000249776 Q8NAQ8 132 aa10.47□□□□□ -0.73
KNSTRN-201ENST00000249776 SACSQ9NZJ4 4579 aa10.46□□□□□ -0.73
KNSTRN-201ENST00000249776 LELP1Q5T871 98 aa10.46□□□□□ -0.74
KNSTRN-201ENST00000249776 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.74
KNSTRN-201ENST00000249776 UPK3BQ9BT76 320 aa10.46□□□□□ -0.74
KNSTRN-201ENST00000249776 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
KNSTRN-201ENST00000249776 TRBV7-6A0A0J9YX20 115 aa10.44□□□□□ -0.74
KNSTRN-201ENST00000249776 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
KNSTRN-201ENST00000249776 DEFB4AO15263 64 aa10.44□□□□□ -0.74
KNSTRN-201ENST00000249776 Q6ZQT0 140 aa10.44□□□□□ -0.74
KNSTRN-201ENST00000249776 LINC00476Q8WZB0 136 aa10.44□□□□□ -0.74
KNSTRN-201ENST00000249776 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
KNSTRN-201ENST00000249776 LAMTOR3Q9UHA4 124 aa10.43□□□□□ -0.74
KNSTRN-201ENST00000249776 A0A087WVE0 104 aa10.42□□□□□ -0.74
KNSTRN-201ENST00000249776 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.41□□□□□ -0.74
KNSTRN-201ENST00000249776 PLECQ15149 4684 aaKnown RBP10.41□□□□□ -0.74
KNSTRN-201ENST00000249776 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
KNSTRN-201ENST00000249776 DIRC1Q969H9 104 aa10.41□□□□□ -0.74
KNSTRN-201ENST00000249776 A0A096LPF7 62 aa10.4□□□□□ -0.74
KNSTRN-201ENST00000249776 PRR3P79522 188 aaKnown RBP10.4□□□□□ -0.74
KNSTRN-201ENST00000249776 CXCL6P80162 114 aa10.4□□□□□ -0.74
KNSTRN-201ENST00000249776 PRR34Q9NV39 138 aa10.4□□□□□ -0.74
KNSTRN-201ENST00000249776 ALMS1Q8TCU4 4167 aa10.4□□□□□ -0.74
KNSTRN-201ENST00000249776 DNAH1Q9P2D7 4330 aa10.4□□□□□ -0.75
KNSTRN-201ENST00000249776 LOC107984640A0A0U1RRK4 108 aa10.39□□□□□ -0.75
KNSTRN-201ENST00000249776 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
KNSTRN-201ENST00000249776 TRAV7A0A075B6U4 112 aa10.38□□□□□ -0.75
KNSTRN-201ENST00000249776 LY6G6CO95867 125 aa10.38□□□□□ -0.75
KNSTRN-201ENST00000249776 DPH3Q96FX2 82 aa10.38□□□□□ -0.75
KNSTRN-201ENST00000249776 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms