RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
SPARC-201ENST00000231061 M0QY20 66 aa5.81□□□□□ -1.48
SPARC-201ENST00000231061 CMC4P56277 68 aaPredicted RBP5.81□□□□□ -1.48
SPARC-201ENST00000231061 C3orf84H3BNL1 204 aa5.8□□□□□ -1.48
SPARC-201ENST00000231061 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
SPARC-201ENST00000231061 CRPP02741 224 aa5.8□□□□□ -1.48
SPARC-201ENST00000231061 WNK1Q9H4A3 2382 aa5.79□□□□□ -1.48
SPARC-201ENST00000231061 TRBV6-5A0A0K0K1A5 114 aa5.79□□□□□ -1.48
SPARC-201ENST00000231061 DEFB136Q30KP8 78 aa5.79□□□□□ -1.48
SPARC-201ENST00000231061 UTP20O75691 2785 aaKnown RBP5.79□□□□□ -1.48
SPARC-201ENST00000231061 DEFB131AP59861 70 aa5.78□□□□□ -1.48
SPARC-201ENST00000231061 PROK1P58294 105 aa5.78□□□□□ -1.48
SPARC-201ENST00000231061 PRR4Q16378 134 aa5.78□□□□□ -1.48
SPARC-201ENST00000231061 C9orf66Q5T8R8 295 aa5.78□□□□□ -1.48
SPARC-201ENST00000231061 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
SPARC-201ENST00000231061 SLURP1P55000 103 aa5.77□□□□□ -1.49
SPARC-201ENST00000231061 ODF3L2Q3SX64 289 aa5.77□□□□□ -1.49
SPARC-201ENST00000231061 CRYBG3Q68DQ2 2970 aa5.77□□□□□ -1.49
SPARC-201ENST00000231061 NBEAL1Q6ZS30 2694 aa5.77□□□□□ -1.49
SPARC-201ENST00000231061 Q8N814 137 aa5.77□□□□□ -1.49
SPARC-201ENST00000231061 IGLV4-3A0A075B6K6 122 aa5.77□□□□□ -1.49
SPARC-201ENST00000231061 DSCR9P59020 149 aa5.76□□□□□ -1.49
SPARC-201ENST00000231061 ITPR2Q14571 2701 aa5.76□□□□□ -1.49
SPARC-201ENST00000231061 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
SPARC-201ENST00000231061 ZNF702PQ9H963 129 aa5.75□□□□□ -1.49
SPARC-201ENST00000231061 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
SPARC-201ENST00000231061 KRTAP16-1A8MUX0 517 aa5.75□□□□□ -1.49
SPARC-201ENST00000231061 AMELXQ99217 191 aa5.75□□□□□ -1.49
SPARC-201ENST00000231061 ATRQ13535 2644 aa5.75□□□□□ -1.49
SPARC-201ENST00000231061 J3QKU1 62 aa5.75□□□□□ -1.49
SPARC-201ENST00000231061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.74□□□□□ -1.49
SPARC-201ENST00000231061 IGHV3OR16-12A0A075B7B8 117 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 TRBV7-4A0A0J9YYF1 115 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 IGKV2-29A2NJV5 120 aaPredicted RBP5.74□□□□□ -1.49
SPARC-201ENST00000231061 PSCAO43653 123 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
SPARC-201ENST00000231061 ATP5EP2Q5VTU8 51 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 HIVEP2P31629 2446 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 CDK2AP2O75956 126 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 IGHV3-30-3P0DP02 117 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 CELSR2Q9HCU4 2923 aa5.74□□□□□ -1.49
SPARC-201ENST00000231061 A0A0J9YXY3 114 aa5.73□□□□□ -1.49
SPARC-201ENST00000231061 NREPQ16612 68 aa5.73□□□□□ -1.49
SPARC-201ENST00000231061 C9orf129Q5T035 196 aaKnown RBP5.73□□□□□ -1.49
SPARC-201ENST00000231061 BCE1O60756 84 aa5.73□□□□□ -1.49
SPARC-201ENST00000231061 HAMPP81172 84 aa5.72□□□□□ -1.49
SPARC-201ENST00000231061 Q6ZSN1 163 aa5.72□□□□□ -1.49
SPARC-201ENST00000231061 IGLV1-51P01701 117 aa5.72□□□□□ -1.49
SPARC-201ENST00000231061 Q6YL49 198 aa5.72□□□□□ -1.49
SPARC-201ENST00000231061 UBL5Q9BZL1 73 aa5.72□□□□□ -1.49
SPARC-201ENST00000231061 NCR3O14931 201 aa5.71□□□□□ -1.5
SPARC-201ENST00000231061 LINC00467Q9BRT7 94 aa5.71□□□□□ -1.5
SPARC-201ENST00000231061 HIGD2AQ9BW72 106 aa5.71□□□□□ -1.5
SPARC-201ENST00000231061 C22orf24Q9Y442 160 aa5.71□□□□□ -1.5
SPARC-201ENST00000231061 FN1P02751 2386 aaKnown RBP5.71□□□□□ -1.5
SPARC-201ENST00000231061 ZANQ9Y493 2812 aa5.71□□□□□ -1.5
SPARC-201ENST00000231061 CASC2Q6XLA1 102 aa5.71□□□□□ -1.5
SPARC-201ENST00000231061 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
SPARC-201ENST00000231061 INSP01308 110 aa5.7□□□□□ -1.5
SPARC-201ENST00000231061 IGHV3-53P01767 116 aa5.7□□□□□ -1.5
SPARC-201ENST00000231061 LINC01547P58512 204 aaPredicted RBP5.7□□□□□ -1.5
SPARC-201ENST00000231061 Q8N3U1 123 aa5.7□□□□□ -1.5
SPARC-201ENST00000231061 CHCHD7Q9BUK0 85 aa5.7□□□□□ -1.5
SPARC-201ENST00000231061 STAB1Q9NY15 2570 aa5.69□□□□□ -1.5
SPARC-201ENST00000231061 A0A096LNT2 108 aa5.69□□□□□ -1.5
SPARC-201ENST00000231061 TRGV1A0A0A0MS02 117 aa5.69□□□□□ -1.5
SPARC-201ENST00000231061 CSMD2Q7Z408 3487 aa5.69□□□□□ -1.5
SPARC-201ENST00000231061 RPL36AP83881 106 aaKnown RBP5.68□□□□□ -1.5
SPARC-201ENST00000231061 LIMD2Q9BT23 127 aa5.68□□□□□ -1.5
SPARC-201ENST00000231061 FAM104AQ969W3 186 aa5.68□□□□□ -1.5
SPARC-201ENST00000231061 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
SPARC-201ENST00000231061 CDKN2A-AS1Q9UH64 79 aa5.68□□□□□ -1.5
SPARC-201ENST00000231061 KRTAP10-9P60411 292 aa5.68□□□□□ -1.5
SPARC-201ENST00000231061 MIAQ16674 131 aa5.67□□□□□ -1.5
SPARC-201ENST00000231061 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
SPARC-201ENST00000231061 C4orf3Q8WVX3 66 aa5.67□□□□□ -1.5
SPARC-201ENST00000231061 DEFB114Q30KQ6 69 aa5.67□□□□□ -1.5
SPARC-201ENST00000231061 LITAFQ99732 161 aa5.67□□□□□ -1.5
SPARC-201ENST00000231061 TRBV10-3A0A0K0K1G6 114 aa5.66□□□□□ -1.5
SPARC-201ENST00000231061 ROMO1P60602 79 aa5.66□□□□□ -1.5
SPARC-201ENST00000231061 Q8NAQ8 132 aa5.65□□□□□ -1.5
SPARC-201ENST00000231061 RPL36ALQ969Q0 106 aaKnown RBP5.65□□□□□ -1.51
SPARC-201ENST00000231061 A8MTW9 85 aa5.64□□□□□ -1.51
SPARC-201ENST00000231061 COX6A2Q02221 97 aa5.64□□□□□ -1.51
SPARC-201ENST00000231061 DEFB113Q30KQ7 82 aa5.64□□□□□ -1.51
SPARC-201ENST00000231061 NIPBLQ6KC79 2804 aaeCLIP5.64□□□□□ -1.51
SPARC-201ENST00000231061 Q6ZTI0 123 aa5.64□□□□□ -1.51
SPARC-201ENST00000231061 IGKV3OR2-268A0A0C4DH90 116 aa5.64□□□□□ -1.51
SPARC-201ENST00000231061 CDC42SE2Q9NRR3 84 aa5.64□□□□□ -1.51
SPARC-201ENST00000231061 CYSRT1A8MQ03 144 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 BPY2O14599 106 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 PLA2G2AP14555 144 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
SPARC-201ENST00000231061 TENM4Q6N022 2769 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 KMT2BQ9UMN6 2715 aaPredicted RBP5.63□□□□□ -1.51
SPARC-201ENST00000231061 FBN2P35556 2912 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 NDUFA1O15239 70 aa5.63□□□□□ -1.51
SPARC-201ENST00000231061 CHTF8P0CG12 524 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms