RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 KIR2DL5BQ8NHK3 375 aa14.13□□□□□ -0.15
SNX3-201ENST00000230085 B9D2Q9BPU9 175 aa14.13□□□□□ -0.15
SNX3-201ENST00000230085 APOC4P55056 127 aa14.11□□□□□ -0.15
SNX3-201ENST00000230085 TMEM256-PLSCR3K7ERE1 68 aa14.11□□□□□ -0.15
SNX3-201ENST00000230085 MUC7Q8TAX7 377 aa14.11□□□□□ -0.15
SNX3-201ENST00000230085 USP17L23D6RBM5 183 aa14.1□□□□□ -0.15
SNX3-201ENST00000230085 NANOS2P60321 138 aaKnown RBP14.1□□□□□ -0.15
SNX3-201ENST00000230085 C6orf226Q5I0X4 101 aa14.1□□□□□ -0.15
SNX3-201ENST00000230085 NCR3O14931 201 aa14.09□□□□□ -0.15
SNX3-201ENST00000230085 PFN2P35080 140 aa14.09□□□□□ -0.15
SNX3-201ENST00000230085 Q8N814 137 aa14.09□□□□□ -0.15
SNX3-201ENST00000230085 COL7A1Q02388 2944 aa14.09□□□□□ -0.15
SNX3-201ENST00000230085 IGHV4-28A0A0C4DH34 117 aa14.09□□□□□ -0.15
SNX3-201ENST00000230085 HUWE1Q7Z6Z7 4374 aaKnown RBP14.08□□□□□ -0.16
SNX3-201ENST00000230085 BCE1O60756 84 aa14.08□□□□□ -0.16
SNX3-201ENST00000230085 OR13C6PQ8NH95 151 aa14.07□□□□□ -0.16
SNX3-201ENST00000230085 IGKV3D-7A0A0C4DH55 119 aa14.06□□□□□ -0.16
SNX3-201ENST00000230085 hADV29S1A0JD25 119 aa14.06□□□□□ -0.16
SNX3-201ENST00000230085 DEFB135Q30KP9 77 aa14.06□□□□□ -0.16
SNX3-201ENST00000230085 TM2D3Q9BRN9 247 aa14.06□□□□□ -0.16
SNX3-201ENST00000230085 RETNQ9HD89 108 aa14.06□□□□□ -0.16
SNX3-201ENST00000230085 NDUFC2-KCTD14E9PQ53 114 aa14.05□□□□□ -0.16
SNX3-201ENST00000230085 KIAA0087Q14695 138 aa14.04□□□□□ -0.16
SNX3-201ENST00000230085 IGKV3OR2-268A0A0C4DH90 116 aa14.03□□□□□ -0.16
SNX3-201ENST00000230085 TENM3Q9P273 2699 aa14.02□□□□□ -0.17
SNX3-201ENST00000230085 H3BQ85 93 aa14.01□□□□□ -0.17
SNX3-201ENST00000230085 SLPIP03973 132 aa14.01□□□□□ -0.17
SNX3-201ENST00000230085 TGP01266 2768 aa14.01□□□□□ -0.17
SNX3-201ENST00000230085 CD164L2Q6UWJ8 174 aa14□□□□□ -0.17
SNX3-201ENST00000230085 LOC110117498A0A087WWA1 95 aa13.99□□□□□ -0.17
SNX3-201ENST00000230085 DPH3Q96FX2 82 aa13.99□□□□□ -0.17
SNX3-201ENST00000230085 CYSTM1Q9H1C7 97 aa13.99□□□□□ -0.17
SNX3-201ENST00000230085 A0A087WVE0 104 aa13.99□□□□□ -0.17
SNX3-201ENST00000230085 FAM19A5Q7Z5A7 132 aaPredicted RBP13.99□□□□□ -0.17
SNX3-201ENST00000230085 LOC107984640A0A0U1RRK4 108 aa13.97□□□□□ -0.17
SNX3-201ENST00000230085 SMIM9A6NGZ8 99 aa13.97□□□□□ -0.17
SNX3-201ENST00000230085 XCL1P47992 114 aa13.97□□□□□ -0.17
SNX3-201ENST00000230085 C5orf47Q569G3 176 aa13.96□□□□□ -0.17
SNX3-201ENST00000230085 PRO0255Q9UI72 69 aa13.96□□□□□ -0.17
SNX3-201ENST00000230085 GYPEP15421 78 aa13.96□□□□□ -0.18
SNX3-201ENST00000230085 LINC00575Q6W349 94 aa13.95□□□□□ -0.18
SNX3-201ENST00000230085 UBL5Q9BZL1 73 aa13.95□□□□□ -0.18
SNX3-201ENST00000230085 X6R8D5 127 aa13.94□□□□□ -0.18
SNX3-201ENST00000230085 C6orf223Q8N319 242 aa13.94□□□□□ -0.18
SNX3-201ENST00000230085 ZNF561-AS1K7EIQ3 104 aa13.93□□□□□ -0.18
SNX3-201ENST00000230085 PDE6GP18545 87 aa13.93□□□□□ -0.18
SNX3-201ENST00000230085 Q6ZQT0 140 aa13.92□□□□□ -0.18
SNX3-201ENST00000230085 DEFB4AO15263 64 aa13.9□□□□□ -0.18
SNX3-201ENST00000230085 GHRHP01286 108 aa13.9□□□□□ -0.18
SNX3-201ENST00000230085 Q8NAQ8 132 aa13.89□□□□□ -0.19
SNX3-201ENST00000230085 A0A0J9YWU9 116 aa13.88□□□□□ -0.19
SNX3-201ENST00000230085 LYRM9A8MSI8 78 aa13.88□□□□□ -0.19
SNX3-201ENST00000230085 C6orf99Q4VX62 202 aa13.88□□□□□ -0.19
SNX3-201ENST00000230085 C11orf68Q9H3H3 251 aaKnown RBP13.88□□□□□ -0.19
SNX3-201ENST00000230085 STAB2Q8WWQ8 2551 aa13.88□□□□□ -0.19
SNX3-201ENST00000230085 MIFP14174 115 aa13.88□□□□□ -0.19
SNX3-201ENST00000230085 RBM3P98179 157 aaKnown RBP13.88□□□□□ -0.19
SNX3-201ENST00000230085 CHCHD10Q8WYQ3 142 aaPredicted RBP13.88□□□□□ -0.19
SNX3-201ENST00000230085 IGLV6-57P01721 117 aa13.87□□□□□ -0.19
SNX3-201ENST00000230085 DEFB130BP0DP73 79 aa13.86□□□□□ -0.19
SNX3-201ENST00000230085 DEFB130AP0DP74 79 aa13.86□□□□□ -0.19
SNX3-201ENST00000230085 PRR3P79522 188 aaKnown RBP13.86□□□□□ -0.19
SNX3-201ENST00000230085 GVQW2A0A096LPI5 108 aaPredicted RBP13.85□□□□□ -0.19
SNX3-201ENST00000230085 TRAV7A0A075B6U4 112 aa13.84□□□□□ -0.19
SNX3-201ENST00000230085 EPM2AB3EWF7 344 aa13.84□□□□□ -0.19
SNX3-201ENST00000230085 ENHOQ6UWT2 76 aa13.84□□□□□ -0.19
SNX3-201ENST00000230085 FAM19A1Q7Z5A9 133 aa13.84□□□□□ -0.19
SNX3-201ENST00000230085 CXCL6P80162 114 aa13.83□□□□□ -0.19
SNX3-201ENST00000230085 REG3AQ06141 175 aa13.83□□□□□ -0.19
SNX3-201ENST00000230085 LINC00269Q8N2A0 174 aa13.83□□□□□ -0.19
SNX3-201ENST00000230085 Q8NDZ9 215 aa13.83□□□□□ -0.2
SNX3-201ENST00000230085 TRBV7-6A0A0J9YX20 115 aa13.81□□□□□ -0.2
SNX3-201ENST00000230085 TRAV23DV6A0A075B6W5 121 aa13.8□□□□□ -0.2
SNX3-201ENST00000230085 OXTP01178 125 aa13.8□□□□□ -0.2
SNX3-201ENST00000230085 KLKP1Q107X0 134 aa13.79□□□□□ -0.2
SNX3-201ENST00000230085 CLPSL2Q6UWE3 100 aa13.78□□□□□ -0.2
SNX3-201ENST00000230085 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
SNX3-201ENST00000230085 LINC01547P58512 204 aaPredicted RBP13.78□□□□□ -0.2
SNX3-201ENST00000230085 DSCR8Q96T75 97 aa13.78□□□□□ -0.2
SNX3-201ENST00000230085 PRR34Q9NV39 138 aa13.77□□□□□ -0.21
SNX3-201ENST00000230085 DNAH7Q8WXX0 4024 aa13.76□□□□□ -0.21
SNX3-201ENST00000230085 ANGP03950 147 aaKnown RBP13.76□□□□□ -0.21
SNX3-201ENST00000230085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.76□□□□□ -0.21
SNX3-201ENST00000230085 Q6ZVQ6 151 aa13.76□□□□□ -0.21
SNX3-201ENST00000230085 C9orf116Q5BN46 136 aaPredicted RBP13.75□□□□□ -0.21
SNX3-201ENST00000230085 C11orf45Q8TAV5 145 aa13.75□□□□□ -0.21
SNX3-201ENST00000230085 TRBV7-4A0A0J9YYF1 115 aa13.74□□□□□ -0.21
SNX3-201ENST00000230085 SPAG11BQ08648 103 aa13.74□□□□□ -0.21
SNX3-201ENST00000230085 SPART-AS1P0CW21 52 aa13.73□□□□□ -0.21
SNX3-201ENST00000230085 Q5XG85 94 aa13.73□□□□□ -0.21
SNX3-201ENST00000230085 WWC2-AS2Q96NR7 200 aa13.73□□□□□ -0.21
SNX3-201ENST00000230085 H7BZZ5 65 aa13.73□□□□□ -0.21
SNX3-201ENST00000230085 LAMTOR3Q9UHA4 124 aa13.73□□□□□ -0.21
SNX3-201ENST00000230085 FAM236DA0A1B0GTK5 79 aa13.72□□□□□ -0.21
SNX3-201ENST00000230085 FAM236CP0DP71 79 aa13.72□□□□□ -0.21
SNX3-201ENST00000230085 LELP1Q5T871 98 aa13.72□□□□□ -0.21
SNX3-201ENST00000230085 C20orf197Q8N268 126 aa13.71□□□□□ -0.21
SNX3-201ENST00000230085 CSMD3Q7Z407 3707 aa13.71□□□□□ -0.21
SNX3-201ENST00000230085 C10orf25Q5T742 122 aa13.71□□□□□ -0.22
SNX3-201ENST00000230085 UNQ6190/PRO20217Q6UXQ8 127 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms