RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 Q8N814 137 aa15.02□□□□□ -0.01
CCDC9-201ENST00000221922 MUC7Q8TAX7 377 aa15.02□□□□□ -0.01
CCDC9-201ENST00000221922 LINC00846Q9NV44 126 aa15.01□□□□□ -0.01
CCDC9-201ENST00000221922 HIST1H4AP62805 103 aaKnown RBP15□□□□□ -0.01
CCDC9-201ENST00000221922 SPAG11BQ08648 103 aa15□□□□□ -0.01
CCDC9-201ENST00000221922 CMYA5Q8N3K9 4069 aa15□□□□□ -0.01
CCDC9-201ENST00000221922 C9orf116Q5BN46 136 aaPredicted RBP14.99□□□□□ -0.01
CCDC9-201ENST00000221922 Q6JHZ5 121 aa14.99□□□□□ -0.01
CCDC9-201ENST00000221922 PKD1L1Q8TDX9 2849 aa14.98□□□□□ -0.01
CCDC9-201ENST00000221922 ENHOQ6UWT2 76 aa14.97□□□□□ -0.01
CCDC9-201ENST00000221922 KPRPQ5T749 579 aaPredicted RBP14.97□□□□□ -0.01
CCDC9-201ENST00000221922 Q8NDZ9 215 aa14.97□□□□□ -0.01
CCDC9-201ENST00000221922 CCKP06307 115 aa14.96□□□□□ -0.01
CCDC9-201ENST00000221922 JMJD7-PLA2G4BH0Y9G9 81 aa14.96□□□□□ -0.02
CCDC9-201ENST00000221922 TMEM256-PLSCR3K7ERE1 68 aa14.96□□□□□ -0.02
CCDC9-201ENST00000221922 C3orf22Q8N5N4 141 aa14.96□□□□□ -0.02
CCDC9-201ENST00000221922 Q6ZTC4 211 aa14.95□□□□□ -0.02
CCDC9-201ENST00000221922 A0A0J9YWU9 116 aa14.94□□□□□ -0.02
CCDC9-201ENST00000221922 UQCRQO14949 82 aa14.94□□□□□ -0.02
CCDC9-201ENST00000221922 DNAH3Q8TD57 4116 aa14.94□□□□□ -0.02
CCDC9-201ENST00000221922 UNQ6190/PRO20217Q6UXQ8 127 aa14.93□□□□□ -0.02
CCDC9-201ENST00000221922 C10orf25Q5T742 122 aa14.92□□□□□ -0.02
CCDC9-201ENST00000221922 C6orf223Q8N319 242 aa14.92□□□□□ -0.02
CCDC9-201ENST00000221922 C6orf99Q4VX62 202 aa14.91□□□□□ -0.02
CCDC9-201ENST00000221922 LINC00526Q96FQ7 95 aa14.91□□□□□ -0.02
CCDC9-201ENST00000221922 GVQW2A0A096LPI5 108 aaPredicted RBP14.9□□□□□ -0.02
CCDC9-201ENST00000221922 IGKV3D-7A0A0C4DH55 119 aa14.9□□□□□ -0.02
CCDC9-201ENST00000221922 ATOX1O00244 68 aa14.9□□□□□ -0.02
CCDC9-201ENST00000221922 S100A7L2Q5SY68 101 aa14.89□□□□□ -0.03
CCDC9-201ENST00000221922 LINC00575Q6W349 94 aa14.89□□□□□ -0.03
CCDC9-201ENST00000221922 WFDC10BQ8IUB3 73 aa14.89□□□□□ -0.03
CCDC9-201ENST00000221922 C9orf153Q5TBE3 101 aa14.88□□□□□ -0.03
CCDC9-201ENST00000221922 C2orf48Q96LS8 159 aa14.88□□□□□ -0.03
CCDC9-201ENST00000221922 COX7CP15954 63 aa14.88□□□□□ -0.03
CCDC9-201ENST00000221922 RPL18AQ02543 176 aaKnown RBP14.86□□□□□ -0.03
CCDC9-201ENST00000221922 C11orf45Q8TAV5 145 aa14.86□□□□□ -0.03
CCDC9-201ENST00000221922 ANK2Q01484 3957 aa14.86□□□□□ -0.03
CCDC9-201ENST00000221922 IGLV6-57P01721 117 aa14.85□□□□□ -0.03
CCDC9-201ENST00000221922 DEFB131BA0A096LNP1 70 aa14.83□□□□□ -0.03
CCDC9-201ENST00000221922 TENM3Q9P273 2699 aa14.83□□□□□ -0.04
CCDC9-201ENST00000221922 hADV29S1A0JD25 119 aa14.81□□□□□ -0.04
CCDC9-201ENST00000221922 ESRGQ1W209 222 aa14.81□□□□□ -0.04
CCDC9-201ENST00000221922 C6orf48Q9UBA6 75 aa14.81□□□□□ -0.04
CCDC9-201ENST00000221922 COL6A5A8TX70 2615 aa14.81□□□□□ -0.04
CCDC9-201ENST00000221922 ZNF561-AS1K7EIQ3 104 aa14.8□□□□□ -0.04
CCDC9-201ENST00000221922 ATP5EP2Q5VTU8 51 aa14.8□□□□□ -0.04
CCDC9-201ENST00000221922 KRTAP26-1Q6PEX3 210 aa14.8□□□□□ -0.04
CCDC9-201ENST00000221922 SMIM20Q8N5G0 67 aa14.8□□□□□ -0.04
CCDC9-201ENST00000221922 A0A087WVE0 104 aa14.79□□□□□ -0.04
CCDC9-201ENST00000221922 CRYGAP11844 174 aa14.79□□□□□ -0.04
CCDC9-201ENST00000221922 LINC01556Q5JQF7 62 aa14.78□□□□□ -0.04
CCDC9-201ENST00000221922 SVIPQ8NHG7 77 aa14.78□□□□□ -0.04
CCDC9-201ENST00000221922 TM2D3Q9BRN9 247 aa14.77□□□□□ -0.04
CCDC9-201ENST00000221922 CAMK2N2Q96S95 79 aa14.77□□□□□ -0.05
CCDC9-201ENST00000221922 LOC110117498A0A087WWA1 95 aa14.75□□□□□ -0.05
CCDC9-201ENST00000221922 USP17L23D6RBM5 183 aa14.75□□□□□ -0.05
CCDC9-201ENST00000221922 RBM3P98179 157 aaKnown RBP14.75□□□□□ -0.05
CCDC9-201ENST00000221922 C1orf43Q9BWL3 253 aa14.75□□□□□ -0.05
CCDC9-201ENST00000221922 K7EIL1 84 aa14.75□□□□□ -0.05
CCDC9-201ENST00000221922 Q6ZQT0 140 aa14.75□□□□□ -0.05
CCDC9-201ENST00000221922 NOTCH1P46531 2555 aa14.75□□□□□ -0.05
CCDC9-201ENST00000221922 PRB2P02812 416 aaPredicted RBP14.74□□□□□ -0.05
CCDC9-201ENST00000221922 HIGD2BQ4VC39 106 aa14.74□□□□□ -0.05
CCDC9-201ENST00000221922 SERP2Q8N6R1 65 aa14.74□□□□□ -0.05
CCDC9-201ENST00000221922 H3BQ85 93 aa14.73□□□□□ -0.05
CCDC9-201ENST00000221922 TRAV10A0A0B4J240 114 aa14.72□□□□□ -0.05
CCDC9-201ENST00000221922 TRBV10-3A0A0K0K1G6 114 aa14.72□□□□□ -0.05
CCDC9-201ENST00000221922 F8WDY8 70 aa14.72□□□□□ -0.05
CCDC9-201ENST00000221922 C15orf56Q8N910 161 aa14.72□□□□□ -0.05
CCDC9-201ENST00000221922 UBL5Q9BZL1 73 aa14.72□□□□□ -0.05
CCDC9-201ENST00000221922 TRAV23DV6A0A075B6W5 121 aa14.7□□□□□ -0.06
CCDC9-201ENST00000221922 XAGE1AQ9HD64 81 aa14.7□□□□□ -0.06
CCDC9-201ENST00000221922 Q6ZQY7 126 aa14.69□□□□□ -0.06
CCDC9-201ENST00000221922 DIRC1Q969H9 104 aa14.69□□□□□ -0.06
CCDC9-201ENST00000221922 LAMTOR3Q9UHA4 124 aa14.69□□□□□ -0.06
CCDC9-201ENST00000221922 NBEAL1Q6ZS30 2694 aa14.68□□□□□ -0.06
CCDC9-201ENST00000221922 DNAH10OSP0CZ25 163 aa14.68□□□□□ -0.06
CCDC9-201ENST00000221922 Q6ZRU5 148 aa14.68□□□□□ -0.06
CCDC9-201ENST00000221922 IGKV2D-24A0A075B6R9 120 aa14.67□□□□□ -0.06
CCDC9-201ENST00000221922 UPK3BQ9BT76 320 aa14.67□□□□□ -0.06
CCDC9-201ENST00000221922 NDUFC2-KCTD14E9PQ53 114 aa14.66□□□□□ -0.06
CCDC9-201ENST00000221922 ZNF73O43830 326 aaPredicted RBP14.65□□□□□ -0.06
CCDC9-201ENST00000221922 TRBV7-6A0A0J9YX20 115 aa14.65□□□□□ -0.06
CCDC9-201ENST00000221922 PDE6GP18545 87 aa14.65□□□□□ -0.06
CCDC9-201ENST00000221922 MRAPQ8TCY5 172 aa14.65□□□□□ -0.06
CCDC9-201ENST00000221922 VPREB1P12018 145 aa14.64□□□□□ -0.07
CCDC9-201ENST00000221922 FAM19A1Q7Z5A9 133 aa14.64□□□□□ -0.07
CCDC9-201ENST00000221922 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.64□□□□□ -0.07
CCDC9-201ENST00000221922 DSCR8Q96T75 97 aa14.64□□□□□ -0.07
CCDC9-201ENST00000221922 ELOF1P60002 83 aaKnown RBP14.63□□□□□ -0.07
CCDC9-201ENST00000221922 CYSTM1Q9H1C7 97 aa14.63□□□□□ -0.07
CCDC9-201ENST00000221922 COX7BP24311 80 aa14.62□□□□□ -0.07
CCDC9-201ENST00000221922 M0R2N4 97 aa14.62□□□□□ -0.07
CCDC9-201ENST00000221922 M0R378 163 aa14.61□□□□□ -0.07
CCDC9-201ENST00000221922 SYCNQ0VAF6 134 aa14.59□□□□□ -0.07
CCDC9-201ENST00000221922 GHRHP01286 108 aa14.59□□□□□ -0.07
CCDC9-201ENST00000221922 MDFIQ99750 246 aa14.59□□□□□ -0.07
CCDC9-201ENST00000221922 LINC00588Q9Y4M8 146 aa14.58□□□□□ -0.08
CCDC9-201ENST00000221922 TRBV7-4A0A0J9YYF1 115 aa14.56□□□□□ -0.08
CCDC9-201ENST00000221922 LINC01547P58512 204 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms