RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Ighv9-4A0A0A6YWH6 117 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr872E9PVW2 323 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 BC030500E9Q6W0 185 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm9376G3UW68 176 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 9130204L05RikG3UWB8 92 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Defb2P82020 71 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Trp53rkaQ5U452 244 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr509Q8VF20 321 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1441Q8VFV3 318 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr33Q8VGX7 318 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Tp53rkQ99PW4 244 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Thap8E9Q695 213 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Tcf21O35437 179 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Rab4aP56371 218 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr149Q60888 311 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 RfxapQ8VCG9 231 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1445Q8VFW9 314 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1228Q8VGM9 323 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1256Q8VGP1 306 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Tm2d1Q99MB3 208 aa11.56□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm12886B1AZM5 119 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm17455G3UW87 128 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ren1P06281 402 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Plp1P60202 277 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 RhogP84096 191 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1209Q3SXJ3 310 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Mob4Q6PEB6 225 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 B430305J03RikQ8BQQ8 176 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr262Q8VFV8 312 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Fbxo25Q9D2Y6 357 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 FlnaQ8BTM8 2647 aaKnown RBP11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ighv7-4A0A0A6YXL5 121 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 IgipA0A1B0GR74 53 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Esp23A8R0V5 104 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm26965M0QWH4 86 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 BlcapP62951 87 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 KhkP97328 298 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Il31Q6EAL8 163 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1336Q8VGH5 314 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Susd2Q9DBX3 820 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ctnnbip1Q9JJN6 81 aa11.55□□□□□ -0.56
Nup88-202ENSMUST00000108530 P0C1Z5 52 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 PlaurP35456 327 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Sfrp2P97299 295 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Hist1h1tQ07133 208 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Onecut2Q6XBJ3 505 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Tmem189Q99LQ7 271 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Igkv1-133A0A0B4J1H8 120 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Gm28051J3QMA2 81 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ccl1P10146 92 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Crebl2Q32M00 123 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Trav15-1-dv6-1Q5R1D2 117 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ccl12Q62401 104 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr963Q7TRA9 311 aa11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Nhp2Q9CRB2 153 aaKnown RBP11.54□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ighv6-3A0A075B5T2 118 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ighv5-16A0A0B4J1P4 117 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Trav7-1A0A0G2JEV5 112 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 P01748 117 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Edn1P22387 202 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1537P34983 314 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Rnase9P60154 184 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Lrcol1Q3URS3 161 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Prr9Q8BV84 116 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Slc25a48Q8BW66 306 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Olfr1243Q8VGM7 305 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 GgctQ9D7X8 188 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Sorl1O88307 2215 aaKnown RBP11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Ly6lH3BJG9 140 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Bud31Q6PGH1 103 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Dppa1Q810Y7 116 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Scgb3a2Q920H1 91 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Fam162bQ9CX19 157 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Atg101Q9D8Z6 218 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Cml1Q9JIZ0 222 aa11.53□□□□□ -0.56
Nup88-202ENSMUST00000108530 Zfp867E9Q2M4 473 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Adrb3P25962 400 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gnb4P29387 340 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Slc25a5P51881 298 aaKnown RBP11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Znf474Q6V5K9 347 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Vmn1r70Q8R254 298 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Cyyr1Q8VIH7 165 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Znhit3Q9CQK1 151 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Nav3Q80TN7 2359 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Cnn1Q08091 297 aaKnown RBP11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Megf9Q8BH27 600 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Saxo2Q8BQB6 394 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Anapc16Q9CPV2 110 aa11.52□□□□□ -0.57
Nup88-202ENSMUST00000108530 Pdzd2E9Q1M1 2796 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 CubnQ9JLB4 3623 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Tstd1E9PY03 133 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Cd81P35762 236 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 SeboxP70368 190 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Spink11Q09TK7 88 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Olfr996Q7TRA0 314 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Oraov1Q8CH62 137 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Tmem129Q8K304 362 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Olfr1009Q8VFK1 314 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Q9D8L0 127 aa11.51□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm5741B2RVA4 72 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms