RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Hist1h1tQ07133 208 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Pglyrp4Q0VB07 374 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 OstcQ78XF5 149 aa11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 TprF6ZDS4 2431 aaKnown RBP11.56□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm10842Q3U587 122 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Obsl1D3YYU8 1804 aaKnown RBP11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 A0A1L1SR50 188 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Amn1B8JKV0 258 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Nup214Q80U93 2085 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Pi4kaE9Q3L2 2105 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Mrpl27Q99N92 148 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ndufa11Q9D8B4 141 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gtsf1lQ9CWD0 151 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Cd5lQ9QWK4 352 aa11.55□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Trav4-4-dv10A0A075B651 110 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 A0A1Y7VLU2 103 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Rnf217D3YYI7 515 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Zfp11P10751 647 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 GlmpQ9JHJ3 404 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Fbln5Q9WVH9 448 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Plxnd1Q3UH93 1925 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Tcrg-V6A0A075B5Y8 134 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Lynx1P0DP60 116 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Reg1P43137 165 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Sh3bgrl3Q91VW3 93 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Lgals6O54891 301 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 P04219 140 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ighv1-15A0A0A6YXA5 117 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist1h2bfP10853 126 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist1h2bbQ64475 126 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 C330021F23RikQ8C7T0 141 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist1h2bkQ8CGP1 126 aaKnown RBP11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Hist1h2bpQ8CGP2 126 aaKnown RBP11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Clec5aQ9R007 190 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 C1qtnf9Q4ZJN1 333 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 QrfpQ8CE23 124 aa11.54□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Cox7a2lQ61387 111 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Iba57Q8CAK1 358 aaKnown RBP11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Timm21Q8CCM6 249 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Rs1Q9Z1L4 224 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Trav16d-dv11A0A075B617 117 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm28269A0A087WSG3 125 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm10767Q3TQP0 103 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Znf146Q8BQN6 292 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ssbp2Q9CYZ8 361 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Igkv4-90A0A075B5L3 117 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ms4a12A0A087WSB9 263 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Rnf5O35445 180 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Saxo2Q8BQB6 394 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Wdr81Q5ND34 1934 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Trbv30A0A0B4J1P1 111 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm21616B6ZB74 166 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Trav7d-3Q5R1I1 112 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Mgst3Q9CPU4 153 aa11.53□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Gm29423A0A087WRM1 55 aa11.52□□□□□ -0.56
Col1a1-201ENSMUST00000001547 H2al2bA9Z055 111 aa11.52□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Chac1Q8R3J5 223 aa11.52□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Olfr984Q8VFN1 314 aa11.52□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Abca7Q91V24 2159 aa11.52□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Ssbp1Q9CYR0 152 aaKnown RBP11.52□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Dock4P59764 1978 aa11.52□□□□□ -0.56
Col1a1-201ENSMUST00000001547 Igkv4-63A0A0G2JFU6 117 aa11.52□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Tmem238A9JSM3 176 aa11.52□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Dmrt3Q80WT2 476 aa11.52□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Heatr1G3X9B1 2143 aaKnown RBP11.52□□□□□ -0.57
Col1a1-201ENSMUST00000001547 EpopQ7TNS8 369 aa11.52□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Klf11Q8K1S5 502 aa11.52□□□□□ -0.57
Col1a1-201ENSMUST00000001547 A0A286YE02 88 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Insl3O09107 122 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Ighv1-22A0A075B5U7 117 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Trav7n-4A0A075B620 113 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Ighv5-12-4A0A0A6YWG4 117 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Igkv14-111A0A140T8P9 117 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 CntfrO88507 372 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Dmrtc2Q8CGW9 370 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Zfp648D3Z0W3 525 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Klk1b4P00757 256 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Gm10881P01642 115 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Q80X32 188 aaKnown RBP11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Crim1Q9JLL0 1037 aa11.51□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Cacna1iE9Q7P2 2199 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Ighv1-81A0A075B5Y4 117 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Gm12830F6XVH0 157 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 P01680 129 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Iglc2P01844 104 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Gtf3c1Q8K284 2101 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Higd1aQ9JLR9 95 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 CrebbpP45481 2441 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Timp3P39876 211 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Kif26aQ52KG5 1881 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Shank1D3YZU1 2167 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 SbpP15501 199 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Tnfrsf26P83626 204 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Snrnp200Q6P4T2 2136 aaKnown RBP11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Hist3h2bbQ8CGP0 126 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Hist3h2baQ9D2U9 126 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Ighv1-36A0A0A6YXT2 117 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Higd1bQ99JY6 98 aa11.5□□□□□ -0.57
Col1a1-201ENSMUST00000001547 Tmem8bB1AWJ5 472 aa11.49□□□□□ -0.57
Col1a1-201ENSMUST00000001547 P01896 185 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms