RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 BCE1O60756 84 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 RPL35AP18077 110 aaKnown RBP4.22□□□□□ -1.73
CASC19-260ENST00000641828 ECSCRQ19T08 205 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 TMEM86BQ8N661 226 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 Q8N9W7 124 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 MINOS1-NBL1R4GNA1 71 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 NOTCH1P46531 2555 aa4.22□□□□□ -1.73
CASC19-260ENST00000641828 IGHV3-16A0A0C4DH30 117 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 H0YGX0 51 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 XCL1P47992 114 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 SEC61GP60059 68 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 KRTAP24-1Q3LI83 254 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 Q9HAA7 133 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 C14orf132Q9NPU4 83 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 XCL2Q9UBD3 114 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 TRBV10-3A0A0K0K1G6 114 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 KNCNA6PVL3 124 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 F6UB75 175 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 NDUFA4O00483 81 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 ATP6V0E1O15342 81 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 RS1O15537 224 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 FAM223AQ8IWN6 122 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 V9GYY9 64 aa4.21□□□□□ -1.74
CASC19-260ENST00000641828 MAP1AP78559 2803 aaPredicted RBP4.21□□□□□ -1.74
CASC19-260ENST00000641828 E7EQL1 145 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 IGHV4-31P0DP07 118 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 DEFB1P60022 68 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 LYPD5Q6UWN5 251 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 SOSTDC1Q6X4U4 206 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 TLN2Q9Y4G6 2542 aa4.2□□□□□ -1.74
CASC19-260ENST00000641828 H7BZZ5 65 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 TRBV12-3P01733 135 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 CCKP06307 115 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 SIRPDQ9H106 197 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 C16orf95Q9H693 158 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 PKIGQ9Y2B9 76 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 SONP18583 2426 aaKnown RBP4.19□□□□□ -1.74
CASC19-260ENST00000641828 LYNX1G3V0Z9 82 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 G3V318 75 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 CRPP02741 224 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 LYNX1P0DP58 116 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 RNASE13Q5GAN3 156 aaKnown RBP4.19□□□□□ -1.74
CASC19-260ENST00000641828 TGP01266 2768 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 PKD1L1Q8TDX9 2849 aa4.19□□□□□ -1.74
CASC19-260ENST00000641828 TRAV7A0A075B6U4 112 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 TRAV23DV6A0A075B6W5 121 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 C9orf129Q5T035 196 aaKnown RBP4.18□□□□□ -1.74
CASC19-260ENST00000641828 C1orf195Q5TG92 126 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 CHCHD7Q9BUK0 85 aa4.18□□□□□ -1.74
CASC19-260ENST00000641828 IGHV1OR15-1A0A075B7D0 117 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 A0A0U1RRA0 63 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 JMJD7-PLA2G4BH0Y9G9 81 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 UNQ9165/PRO28630Q6UXU0 137 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 FP248Q71RG6 208 aaPredicted RBP4.17□□□□□ -1.74
CASC19-260ENST00000641828 FAM19A3Q7Z5A8 133 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 ZNF625Q96I27 306 aaPredicted RBP4.17□□□□□ -1.74
CASC19-260ENST00000641828 A0A087WYN8 130 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 NDUFC1O43677 76 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
CASC19-260ENST00000641828 HILS1P60008 231 aa4.17□□□□□ -1.74
CASC19-260ENST00000641828 NCR3O14931 201 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 COX6A2Q02221 97 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
CASC19-260ENST00000641828 SMIM11BQ8TCY0 68 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 RHPN1-AS1Q9BWJ2 59 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 ORMDL1Q9P0S3 153 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 IGLV9-49A0A0B4J1Y8 123 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 DNAJC9-AS1A6NH13 148 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 SMIM1B2RUZ4 78 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 ENHOQ6UWT2 76 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 LINC00337Q8N6G1 96 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 UBL5Q9BZL1 73 aa4.16□□□□□ -1.74
CASC19-260ENST00000641828 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
CASC19-260ENST00000641828 LECT2O14960 151 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 FAM19A1Q7Z5A9 133 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 MIR7-3HGQ8N6C7 128 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 USMG5Q96IX5 58 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 LINC00467Q9BRT7 94 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 SND1-IT1Q9HBX3 110 aa4.15□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 IGHV3OR16-12A0A075B7B8 117 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 TMEM89A2RUT3 159 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 BLCAPP62952 87 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 RPL36AP83881 106 aaKnown RBP4.14□□□□□ -1.75
CASC19-260ENST00000641828 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 TRBV7-6A0A0J9YX20 115 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 K7EMT4 169 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 TMEM256-PLSCR3K7ERE1 68 aa4.14□□□□□ -1.75
CASC19-260ENST00000641828 RBM3P98179 157 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms