RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PIEZO1Q92508 2521 aa9.59□□□□□ -0.87
UBE3A-228ENST00000638155 A0A087WSZ3 146 aa9.59□□□□□ -0.87
UBE3A-228ENST00000638155 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
UBE3A-228ENST00000638155 U3KQA8 63 aa9.59□□□□□ -0.87
UBE3A-228ENST00000638155 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.88
UBE3A-228ENST00000638155 C2orf48Q96LS8 159 aa9.59□□□□□ -0.88
UBE3A-228ENST00000638155 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
UBE3A-228ENST00000638155 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
UBE3A-228ENST00000638155 LINC00482Q8N8I6 264 aa9.57□□□□□ -0.88
UBE3A-228ENST00000638155 PRM2P04554 102 aa9.57□□□□□ -0.88
UBE3A-228ENST00000638155 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
UBE3A-228ENST00000638155 CRIP1P50238 77 aa9.56□□□□□ -0.88
UBE3A-228ENST00000638155 P0C879 139 aa9.56□□□□□ -0.88
UBE3A-228ENST00000638155 C4orf26Q17RF5 130 aa9.56□□□□□ -0.88
UBE3A-228ENST00000638155 Q6YL49 198 aa9.56□□□□□ -0.88
UBE3A-228ENST00000638155 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
UBE3A-228ENST00000638155 CDC42SE2Q9NRR3 84 aa9.55□□□□□ -0.88
UBE3A-228ENST00000638155 LY6G6DO95868 133 aa9.55□□□□□ -0.88
UBE3A-228ENST00000638155 C11orf1Q9H5F2 150 aa9.55□□□□□ -0.88
UBE3A-228ENST00000638155 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
UBE3A-228ENST00000638155 IGLV8-61A0A075B6I0 122 aa9.54□□□□□ -0.88
UBE3A-228ENST00000638155 UNQ6190/PRO20217Q6UXQ8 127 aa9.53□□□□□ -0.88
UBE3A-228ENST00000638155 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
UBE3A-228ENST00000638155 F8WDY8 70 aa9.53□□□□□ -0.88
UBE3A-228ENST00000638155 MRGPRG-AS1Q2M3A8 158 aa9.53□□□□□ -0.88
UBE3A-228ENST00000638155 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
UBE3A-228ENST00000638155 SMIM29Q86T20 159 aa9.52□□□□□ -0.89
UBE3A-228ENST00000638155 FSTL3O95633 263 aa9.52□□□□□ -0.89
UBE3A-228ENST00000638155 TLN1Q9Y490 2541 aaKnown RBP9.52□□□□□ -0.89
UBE3A-228ENST00000638155 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
UBE3A-228ENST00000638155 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
UBE3A-228ENST00000638155 MDFIQ99750 246 aa9.51□□□□□ -0.89
UBE3A-228ENST00000638155 KLLNB2CW77 178 aa9.49□□□□□ -0.89
UBE3A-228ENST00000638155 WDR87Q6ZQQ6 2873 aa9.49□□□□□ -0.89
UBE3A-228ENST00000638155 IGFL2Q6UWQ7 119 aa9.48□□□□□ -0.89
UBE3A-228ENST00000638155 LINC00574Q9H8X3 128 aa9.48□□□□□ -0.89
UBE3A-228ENST00000638155 POLR2KP53803 58 aaKnown RBP9.48□□□□□ -0.89
UBE3A-228ENST00000638155 SMIM1B2RUZ4 78 aa9.48□□□□□ -0.89
UBE3A-228ENST00000638155 RPS28P62857 69 aaKnown RBP9.48□□□□□ -0.89
UBE3A-228ENST00000638155 COL4A4P53420 1690 aaPredicted RBP9.47□□□□□ -0.89
UBE3A-228ENST00000638155 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
UBE3A-228ENST00000638155 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
UBE3A-228ENST00000638155 IGIPA6NJ69 53 aa9.46□□□□□ -0.89
UBE3A-228ENST00000638155 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.89
UBE3A-228ENST00000638155 COX6A2Q02221 97 aa9.45□□□□□ -0.9
UBE3A-228ENST00000638155 C1orf134Q5TEV5 83 aa9.45□□□□□ -0.9
UBE3A-228ENST00000638155 TRAV22A0A0B4J277 110 aa9.45□□□□□ -0.9
UBE3A-228ENST00000638155 CNFNQ9BYD5 112 aa9.45□□□□□ -0.9
UBE3A-228ENST00000638155 Q6ZSV7 163 aa9.44□□□□□ -0.9
UBE3A-228ENST00000638155 H3BPC8 53 aa9.43□□□□□ -0.9
UBE3A-228ENST00000638155 PRR9Q5T870 116 aa9.43□□□□□ -0.9
UBE3A-228ENST00000638155 Q8N2B8 174 aa9.43□□□□□ -0.9
UBE3A-228ENST00000638155 ADAMTSL4-AS1Q5T5F5 129 aa9.43□□□□□ -0.9
UBE3A-228ENST00000638155 FBXL19-AS1Q494R0 122 aa9.43□□□□□ -0.9
UBE3A-228ENST00000638155 SETD2Q9BYW2 2564 aaPredicted RBP9.41□□□□□ -0.9
UBE3A-228ENST00000638155 LMO4P61968 165 aa9.39□□□□□ -0.91
UBE3A-228ENST00000638155 USP9XQ93008 2570 aaPredicted RBP9.39□□□□□ -0.91
UBE3A-228ENST00000638155 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
UBE3A-228ENST00000638155 PSMG3-AS1Q96PY0 264 aa9.39□□□□□ -0.91
UBE3A-228ENST00000638155 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
UBE3A-228ENST00000638155 A8MTW9 85 aa9.39□□□□□ -0.91
UBE3A-228ENST00000638155 SPACA4Q8TDM5 124 aa9.39□□□□□ -0.91
UBE3A-228ENST00000638155 PIEZO2Q9H5I5 2752 aa9.39□□□□□ -0.91
UBE3A-228ENST00000638155 NAV2Q8IVL1 2488 aa9.39□□□□□ -0.91
UBE3A-228ENST00000638155 NHLRC4P0CG21 123 aaPredicted RBP9.38□□□□□ -0.91
UBE3A-228ENST00000638155 TSPEAR-AS2P59090 65 aa9.38□□□□□ -0.91
UBE3A-228ENST00000638155 LINC01600Q96MT4 127 aa9.38□□□□□ -0.91
UBE3A-228ENST00000638155 BCE1O60756 84 aa9.38□□□□□ -0.91
UBE3A-228ENST00000638155 GAS8-AS1O95177 125 aa9.38□□□□□ -0.91
UBE3A-228ENST00000638155 LTBP2Q14767 1821 aa9.36□□□□□ -0.91
UBE3A-228ENST00000638155 A0A1B0GW54 56 aa9.36□□□□□ -0.91
UBE3A-228ENST00000638155 LUZP6Q538Z0 58 aa9.36□□□□□ -0.91
UBE3A-228ENST00000638155 PCSK5Q92824 1860 aa9.36□□□□□ -0.91
UBE3A-228ENST00000638155 MOBPQ13875 183 aa9.36□□□□□ -0.91
UBE3A-228ENST00000638155 APLNQ9ULZ1 77 aa9.36□□□□□ -0.91
UBE3A-228ENST00000638155 ABCA12Q86UK0 2595 aa9.36□□□□□ -0.91
UBE3A-228ENST00000638155 LINC00313P59037 77 aa9.35□□□□□ -0.91
UBE3A-228ENST00000638155 ZNF295-AS1Q8N0V1 137 aa9.35□□□□□ -0.91
UBE3A-228ENST00000638155 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
UBE3A-228ENST00000638155 UQCR11O14957 56 aa9.35□□□□□ -0.91
UBE3A-228ENST00000638155 LINC01554Q52M75 96 aa9.35□□□□□ -0.91
UBE3A-228ENST00000638155 C10orf99Q6UWK7 81 aa9.34□□□□□ -0.91
UBE3A-228ENST00000638155 CYP4F30PQ9H0H9 118 aa9.34□□□□□ -0.91
UBE3A-228ENST00000638155 J3QL48 77 aa9.34□□□□□ -0.91
UBE3A-228ENST00000638155 AMELXQ99217 191 aa9.34□□□□□ -0.91
UBE3A-228ENST00000638155 CDIP1Q9H305 208 aa9.34□□□□□ -0.91
UBE3A-228ENST00000638155 CD164Q04900 197 aa9.34□□□□□ -0.91
UBE3A-228ENST00000638155 Q8NA96 180 aa9.34□□□□□ -0.92
UBE3A-228ENST00000638155 A0A1B0GUV1 79 aa9.33□□□□□ -0.92
UBE3A-228ENST00000638155 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
UBE3A-228ENST00000638155 IGLV4-60A0A075B6I1 120 aa9.33□□□□□ -0.92
UBE3A-228ENST00000638155 BRWD1-AS2P59051 145 aa9.33□□□□□ -0.92
UBE3A-228ENST00000638155 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
UBE3A-228ENST00000638155 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
UBE3A-228ENST00000638155 ANKRD17O75179 2603 aaKnown RBP9.32□□□□□ -0.92
UBE3A-228ENST00000638155 EDN2P20800 178 aa9.32□□□□□ -0.92
UBE3A-228ENST00000638155 JMJD1CQ15652 2540 aa9.32□□□□□ -0.92
UBE3A-228ENST00000638155 PKD1L2Q7Z442 2459 aa9.31□□□□□ -0.92
UBE3A-228ENST00000638155 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
UBE3A-228ENST00000638155 SMCR5Q8TEV8 140 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms