RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 SS18Q15532 418 aa12.86□□□□□ -0.35
CNOT9-209ENST00000627282 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
CNOT9-209ENST00000627282 SPANXDQ9BXN6 97 aa12.86□□□□□ -0.35
CNOT9-209ENST00000627282 SPANXCQ9NY87 97 aa12.86□□□□□ -0.35
CNOT9-209ENST00000627282 LINC00336Q6ZUF6 198 aa12.85□□□□□ -0.35
CNOT9-209ENST00000627282 MUSTN1Q8IVN3 82 aa12.84□□□□□ -0.35
CNOT9-209ENST00000627282 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
CNOT9-209ENST00000627282 A0A087WZ39 114 aa12.84□□□□□ -0.35
CNOT9-209ENST00000627282 A0A1W2PPM0 123 aa12.84□□□□□ -0.35
CNOT9-209ENST00000627282 RTL8CO15255 209 aa12.84□□□□□ -0.35
CNOT9-209ENST00000627282 ZNF625Q96I27 306 aaPredicted RBP12.83□□□□□ -0.36
CNOT9-209ENST00000627282 HECTD4Q9Y4D8 3996 aa12.82□□□□□ -0.36
CNOT9-209ENST00000627282 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
CNOT9-209ENST00000627282 ADAMTSL4-AS1Q5T5F5 129 aa12.82□□□□□ -0.36
CNOT9-209ENST00000627282 HERV-K104P63124 156 aa12.81□□□□□ -0.36
CNOT9-209ENST00000627282 MIAQ16674 131 aa12.81□□□□□ -0.36
CNOT9-209ENST00000627282 LINC01561Q8N1V8 128 aa12.81□□□□□ -0.36
CNOT9-209ENST00000627282 LINC00269Q8N2A0 174 aa12.81□□□□□ -0.36
CNOT9-209ENST00000627282 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
CNOT9-209ENST00000627282 ANGP03950 147 aaKnown RBP12.8□□□□□ -0.36
CNOT9-209ENST00000627282 CFC1BP0CG36 223 aa12.8□□□□□ -0.36
CNOT9-209ENST00000627282 CFC1P0CG37 223 aa12.8□□□□□ -0.36
CNOT9-209ENST00000627282 A4D1N5 150 aa12.8□□□□□ -0.36
CNOT9-209ENST00000627282 APOMO95445 188 aa12.8□□□□□ -0.36
CNOT9-209ENST00000627282 FABP2P12104 132 aa12.8□□□□□ -0.36
CNOT9-209ENST00000627282 CIRBPQ14011 172 aaKnown RBP12.8□□□□□ -0.36
CNOT9-209ENST00000627282 CLPSL2Q6UWE3 100 aa12.8□□□□□ -0.36
CNOT9-209ENST00000627282 C5orf38Q86SI9 138 aa12.8□□□□□ -0.36
CNOT9-209ENST00000627282 IBA57-AS1B1ANH7 110 aa12.79□□□□□ -0.36
CNOT9-209ENST00000627282 REG3AQ06141 175 aa12.79□□□□□ -0.36
CNOT9-209ENST00000627282 C1orf134Q5TEV5 83 aa12.79□□□□□ -0.36
CNOT9-209ENST00000627282 KLK12Q9UKR0 248 aa12.79□□□□□ -0.36
CNOT9-209ENST00000627282 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
CNOT9-209ENST00000627282 IFITM1P13164 125 aa12.78□□□□□ -0.36
CNOT9-209ENST00000627282 XCL1P47992 114 aa12.78□□□□□ -0.36
CNOT9-209ENST00000627282 GTF2H5Q6ZYL4 71 aa12.78□□□□□ -0.36
CNOT9-209ENST00000627282 DNAH17Q9UFH2 4485 aa12.77□□□□□ -0.36
CNOT9-209ENST00000627282 K7EP34 96 aa12.77□□□□□ -0.36
CNOT9-209ENST00000627282 PRSS2P07478 247 aa12.77□□□□□ -0.36
CNOT9-209ENST00000627282 C6orf223Q8N319 242 aa12.77□□□□□ -0.36
CNOT9-209ENST00000627282 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.77□□□□□ -0.37
CNOT9-209ENST00000627282 CD164L2Q6UWJ8 174 aa12.77□□□□□ -0.37
CNOT9-209ENST00000627282 FAT2Q9NYQ8 4349 aa12.76□□□□□ -0.37
CNOT9-209ENST00000627282 A0A0B4J2C4 111 aa12.76□□□□□ -0.37
CNOT9-209ENST00000627282 PGPEP1Q9NXJ5 209 aa12.76□□□□□ -0.37
CNOT9-209ENST00000627282 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
CNOT9-209ENST00000627282 SPCS1Q9Y6A9 102 aa12.76□□□□□ -0.37
CNOT9-209ENST00000627282 A0A1B0GVY2 172 aa12.75□□□□□ -0.37
CNOT9-209ENST00000627282 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
CNOT9-209ENST00000627282 MEIG1Q5JSS6 88 aa12.74□□□□□ -0.37
CNOT9-209ENST00000627282 Q6ZRN7 208 aaPredicted RBP12.74□□□□□ -0.37
CNOT9-209ENST00000627282 Q9HAA7 133 aa12.74□□□□□ -0.37
CNOT9-209ENST00000627282 PRR34Q9NV39 138 aa12.74□□□□□ -0.37
CNOT9-209ENST00000627282 PRO1854Q9UHT4 67 aa12.74□□□□□ -0.37
CNOT9-209ENST00000627282 EIF4EBP3O60516 100 aaPredicted RBP12.73□□□□□ -0.37
CNOT9-209ENST00000627282 TSPAN13O95857 204 aa12.73□□□□□ -0.37
CNOT9-209ENST00000627282 ENHOQ6UWT2 76 aa12.73□□□□□ -0.37
CNOT9-209ENST00000627282 UBE2WQ96B02 151 aa12.73□□□□□ -0.37
CNOT9-209ENST00000627282 SFTA2Q6UW10 78 aa12.73□□□□□ -0.37
CNOT9-209ENST00000627282 COX7A2LO14548 114 aa12.71□□□□□ -0.37
CNOT9-209ENST00000627282 Q8IZM0 81 aa12.71□□□□□ -0.37
CNOT9-209ENST00000627282 DAND5Q8N907 189 aa12.71□□□□□ -0.37
CNOT9-209ENST00000627282 LINC00308Q8TCZ7 52 aa12.71□□□□□ -0.37
CNOT9-209ENST00000627282 COPS9Q8WXC6 57 aa12.71□□□□□ -0.37
CNOT9-209ENST00000627282 IGLV10-54A0A075B6I4 117 aa12.7□□□□□ -0.38
CNOT9-209ENST00000627282 NPC2P61916 151 aa12.7□□□□□ -0.38
CNOT9-209ENST00000627282 FOXI1Q12951 378 aa12.7□□□□□ -0.38
CNOT9-209ENST00000627282 PPDPFQ9H3Y8 114 aa12.7□□□□□ -0.38
CNOT9-209ENST00000627282 A0A0U1RRA0 63 aa12.69□□□□□ -0.38
CNOT9-209ENST00000627282 CRPP02741 224 aa12.69□□□□□ -0.38
CNOT9-209ENST00000627282 C6orf226Q5I0X4 101 aa12.69□□□□□ -0.38
CNOT9-209ENST00000627282 ERG28Q9UKR5 140 aa12.67□□□□□ -0.38
CNOT9-209ENST00000627282 GAGE12HA6NDE8 117 aa12.66□□□□□ -0.38
CNOT9-209ENST00000627282 SOSTDC1Q6X4U4 206 aa12.66□□□□□ -0.38
CNOT9-209ENST00000627282 PKD1P98161 4303 aa12.66□□□□□ -0.38
CNOT9-209ENST00000627282 TRAV8-4A0A0B4J246 113 aa12.66□□□□□ -0.38
CNOT9-209ENST00000627282 MALP21145 153 aa12.66□□□□□ -0.38
CNOT9-209ENST00000627282 TNP2Q05952 138 aa12.66□□□□□ -0.38
CNOT9-209ENST00000627282 KIAA0087Q14695 138 aa12.66□□□□□ -0.38
CNOT9-209ENST00000627282 IGKV2D-24A0A075B6R9 120 aa12.65□□□□□ -0.38
CNOT9-209ENST00000627282 PKHD1P08F94 4074 aa12.65□□□□□ -0.39
CNOT9-209ENST00000627282 LYRM7Q5U5X0 104 aa12.64□□□□□ -0.39
CNOT9-209ENST00000627282 LOC107984156A0A0G2JMH3 177 aa12.63□□□□□ -0.39
CNOT9-209ENST00000627282 CXCL5P42830 114 aa12.63□□□□□ -0.39
CNOT9-209ENST00000627282 KRTAP26-1Q6PEX3 210 aa12.63□□□□□ -0.39
CNOT9-209ENST00000627282 ARL17AQ8IVW1 177 aa12.63□□□□□ -0.39
CNOT9-209ENST00000627282 RMI2Q96E14 147 aa12.63□□□□□ -0.39
CNOT9-209ENST00000627282 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
CNOT9-209ENST00000627282 DNAH11Q96DT5 4516 aa12.63□□□□□ -0.39
CNOT9-209ENST00000627282 LINC00158P58513 81 aa12.62□□□□□ -0.39
CNOT9-209ENST00000627282 CFAP161Q6P656 301 aa12.62□□□□□ -0.39
CNOT9-209ENST00000627282 MIR7-3HGQ8N6C7 128 aa12.62□□□□□ -0.39
CNOT9-209ENST00000627282 PSCAO43653 123 aa12.61□□□□□ -0.39
CNOT9-209ENST00000627282 CKS1BP61024 79 aa12.61□□□□□ -0.39
CNOT9-209ENST00000627282 C2orf82Q6UX34 121 aa12.6□□□□□ -0.39
CNOT9-209ENST00000627282 H7C2G1 150 aa12.59□□□□□ -0.39
CNOT9-209ENST00000627282 H3BMG7 143 aa12.59□□□□□ -0.39
CNOT9-209ENST00000627282 PFN2P35080 140 aa12.59□□□□□ -0.39
CNOT9-209ENST00000627282 PSMB2P49721 201 aa12.59□□□□□ -0.39
CNOT9-209ENST00000627282 Q1RN00 199 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms