RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 LEPROTO15243 131 aa10.78□□□□□ -0.68
CCNA1-203ENST00000625767 HERVK_113P61574 105 aa10.78□□□□□ -0.68
CCNA1-203ENST00000625767 C14orf177Q52M58 125 aa10.78□□□□□ -0.68
CCNA1-203ENST00000625767 CAMK2N2Q96S95 79 aa10.78□□□□□ -0.68
CCNA1-203ENST00000625767 J3QQQ9 107 aa10.76□□□□□ -0.69
CCNA1-203ENST00000625767 C9orf116Q5BN46 136 aaPredicted RBP10.76□□□□□ -0.69
CCNA1-203ENST00000625767 EREGO14944 169 aa10.76□□□□□ -0.69
CCNA1-203ENST00000625767 SYCNQ0VAF6 134 aa10.76□□□□□ -0.69
CCNA1-203ENST00000625767 ZNF625Q96I27 306 aaPredicted RBP10.76□□□□□ -0.69
CCNA1-203ENST00000625767 C2orf48Q96LS8 159 aa10.76□□□□□ -0.69
CCNA1-203ENST00000625767 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
CCNA1-203ENST00000625767 LRP1BQ9NZR2 4599 aa10.76□□□□□ -0.69
CCNA1-203ENST00000625767 EPPK1P58107 5090 aaKnown RBP10.75□□□□□ -0.69
CCNA1-203ENST00000625767 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
CCNA1-203ENST00000625767 NMUP48645 174 aa10.75□□□□□ -0.69
CCNA1-203ENST00000625767 CKS1BP61024 79 aa10.75□□□□□ -0.69
CCNA1-203ENST00000625767 TP73-AS1Q9UF72 201 aa10.75□□□□□ -0.69
CCNA1-203ENST00000625767 PAM16Q9Y3D7 125 aa10.75□□□□□ -0.69
CCNA1-203ENST00000625767 NDUFA1O15239 70 aa10.74□□□□□ -0.69
CCNA1-203ENST00000625767 CNBPP62633 177 aaKnown RBP10.74□□□□□ -0.69
CCNA1-203ENST00000625767 CARD19Q96LW7 228 aa10.74□□□□□ -0.69
CCNA1-203ENST00000625767 PCP2Q8IVA1 136 aa10.73□□□□□ -0.69
CCNA1-203ENST00000625767 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
CCNA1-203ENST00000625767 NDUFA12Q9UI09 145 aa10.73□□□□□ -0.69
CCNA1-203ENST00000625767 DNAH8Q96JB1 4490 aa10.73□□□□□ -0.69
CCNA1-203ENST00000625767 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
CCNA1-203ENST00000625767 HSBP1L1C9JCN9 74 aa10.72□□□□□ -0.69
CCNA1-203ENST00000625767 LGALS3P17931 250 aaKnown RBP10.72□□□□□ -0.69
CCNA1-203ENST00000625767 VAMP8Q9BV40 100 aa10.72□□□□□ -0.69
CCNA1-203ENST00000625767 SPATA45Q537H7 98 aa10.71□□□□□ -0.69
CCNA1-203ENST00000625767 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
CCNA1-203ENST00000625767 CXCL5P42830 114 aa10.69□□□□□ -0.7
CCNA1-203ENST00000625767 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.69□□□□□ -0.7
CCNA1-203ENST00000625767 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
CCNA1-203ENST00000625767 ZNF815PA8K554 130 aa10.68□□□□□ -0.7
CCNA1-203ENST00000625767 TRBV30A0A0K0K1B3 111 aa10.67□□□□□ -0.7
CCNA1-203ENST00000625767 C14orf144Q96I85 54 aa10.67□□□□□ -0.7
CCNA1-203ENST00000625767 MYMXA0A1B0GTQ4 84 aa10.66□□□□□ -0.7
CCNA1-203ENST00000625767 F8WDY8 70 aa10.66□□□□□ -0.7
CCNA1-203ENST00000625767 PFN2P35080 140 aa10.66□□□□□ -0.7
CCNA1-203ENST00000625767 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
CCNA1-203ENST00000625767 SMIM6P0DI80 62 aa10.66□□□□□ -0.7
CCNA1-203ENST00000625767 Q6ZRP5 223 aa10.66□□□□□ -0.7
CCNA1-203ENST00000625767 ERG28Q9UKR5 140 aa10.66□□□□□ -0.7
CCNA1-203ENST00000625767 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
CCNA1-203ENST00000625767 PANO1I0J062 215 aa10.65□□□□□ -0.7
CCNA1-203ENST00000625767 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
CCNA1-203ENST00000625767 KRTAP10-1P60331 282 aa10.65□□□□□ -0.7
CCNA1-203ENST00000625767 SDIM1Q6ZPB5 146 aa10.65□□□□□ -0.7
CCNA1-203ENST00000625767 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
CCNA1-203ENST00000625767 RPL18AQ02543 176 aaKnown RBP10.64□□□□□ -0.71
CCNA1-203ENST00000625767 A0A096LNI7 61 aa10.63□□□□□ -0.71
CCNA1-203ENST00000625767 GCSHP23434 173 aa10.63□□□□□ -0.71
CCNA1-203ENST00000625767 RNF151Q2KHN1 245 aa10.63□□□□□ -0.71
CCNA1-203ENST00000625767 MEIG1Q5JSS6 88 aa10.63□□□□□ -0.71
CCNA1-203ENST00000625767 DAND5Q8N907 189 aa10.63□□□□□ -0.71
CCNA1-203ENST00000625767 APOBP04114 4563 aaKnown RBP10.63□□□□□ -0.71
CCNA1-203ENST00000625767 COX8AP10176 69 aa10.63□□□□□ -0.71
CCNA1-203ENST00000625767 HERV-K104P63124 156 aa10.63□□□□□ -0.71
CCNA1-203ENST00000625767 IGKV2-24A0A0C4DH68 120 aa10.62□□□□□ -0.71
CCNA1-203ENST00000625767 C16orf90A8MZG2 172 aa10.62□□□□□ -0.71
CCNA1-203ENST00000625767 NDUFC2-KCTD14E9PQ53 114 aa10.62□□□□□ -0.71
CCNA1-203ENST00000625767 GAGE2BQ13066 116 aa10.62□□□□□ -0.71
CCNA1-203ENST00000625767 GAGE2EQ4V326 116 aa10.62□□□□□ -0.71
CCNA1-203ENST00000625767 GAGE2DQ9UEU5 116 aa10.62□□□□□ -0.71
CCNA1-203ENST00000625767 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
CCNA1-203ENST00000625767 ADAMTSL4-AS1Q5T5F5 129 aa10.61□□□□□ -0.71
CCNA1-203ENST00000625767 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
CCNA1-203ENST00000625767 BOD1L2Q8IYS8 172 aa10.61□□□□□ -0.71
CCNA1-203ENST00000625767 C12orf57Q99622 126 aa10.61□□□□□ -0.71
CCNA1-203ENST00000625767 FAM30AQ9NZY2 134 aa10.61□□□□□ -0.71
CCNA1-203ENST00000625767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.61□□□□□ -0.71
CCNA1-203ENST00000625767 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
CCNA1-203ENST00000625767 LINC00158P58513 81 aa10.6□□□□□ -0.71
CCNA1-203ENST00000625767 S100A12P80511 92 aa10.6□□□□□ -0.71
CCNA1-203ENST00000625767 LITAFQ99732 161 aa10.6□□□□□ -0.71
CCNA1-203ENST00000625767 XAGE1AQ9HD64 81 aa10.6□□□□□ -0.71
CCNA1-203ENST00000625767 SCGB1D4Q6XE38 83 aa10.6□□□□□ -0.71
CCNA1-203ENST00000625767 HAMPP81172 84 aa10.59□□□□□ -0.71
CCNA1-203ENST00000625767 MIR7-3HGQ8N6C7 128 aa10.59□□□□□ -0.71
CCNA1-203ENST00000625767 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
CCNA1-203ENST00000625767 EIF4EBP3O60516 100 aaPredicted RBP10.58□□□□□ -0.72
CCNA1-203ENST00000625767 PTTG1IPP53801 180 aa10.58□□□□□ -0.72
CCNA1-203ENST00000625767 NPC2P61916 151 aa10.58□□□□□ -0.72
CCNA1-203ENST00000625767 C9orf129Q5T035 196 aaKnown RBP10.58□□□□□ -0.72
CCNA1-203ENST00000625767 LINC00518Q8N0U6 118 aa10.57□□□□□ -0.72
CCNA1-203ENST00000625767 COX17Q14061 63 aa10.57□□□□□ -0.72
CCNA1-203ENST00000625767 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
CCNA1-203ENST00000625767 SND1-IT1Q9HBX3 110 aa10.57□□□□□ -0.72
CCNA1-203ENST00000625767 FAM168BA1KXE4 195 aa10.56□□□□□ -0.72
CCNA1-203ENST00000625767 C2orf91Q6ZV80 131 aa10.55□□□□□ -0.72
CCNA1-203ENST00000625767 Q8NDZ9 215 aa10.55□□□□□ -0.72
CCNA1-203ENST00000625767 DLEU1O43261 78 aa10.54□□□□□ -0.72
CCNA1-203ENST00000625767 SOSTDC1Q6X4U4 206 aa10.54□□□□□ -0.72
CCNA1-203ENST00000625767 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
CCNA1-203ENST00000625767 KRTAP7-1Q8IUC3 87 aa10.53□□□□□ -0.72
CCNA1-203ENST00000625767 A0A1W2PNN7 141 aa10.53□□□□□ -0.72
CCNA1-203ENST00000625767 TIMM17BO60830 172 aa10.53□□□□□ -0.72
CCNA1-203ENST00000625767 Q6ZSA8 131 aa10.53□□□□□ -0.72
CCNA1-203ENST00000625767 CIRBPQ14011 172 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms