RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 TIMM17AQ99595 171 aa8.13□□□□□ -1.11
USP8-219ENST00000625664 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
USP8-219ENST00000625664 CNBPP62633 177 aaKnown RBP8.12□□□□□ -1.11
USP8-219ENST00000625664 PMVKQ15126 192 aa8.12□□□□□ -1.11
USP8-219ENST00000625664 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
USP8-219ENST00000625664 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
USP8-219ENST00000625664 C15orf56Q8N910 161 aa8.12□□□□□ -1.11
USP8-219ENST00000625664 TAX1BP3O14907 124 aa8.11□□□□□ -1.11
USP8-219ENST00000625664 SLPIP03973 132 aa8.11□□□□□ -1.11
USP8-219ENST00000625664 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
USP8-219ENST00000625664 XCL1P47992 114 aa8.11□□□□□ -1.11
USP8-219ENST00000625664 CFAP161Q6P656 301 aa8.11□□□□□ -1.11
USP8-219ENST00000625664 FAM104AQ969W3 186 aa8.11□□□□□ -1.11
USP8-219ENST00000625664 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
USP8-219ENST00000625664 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
USP8-219ENST00000625664 LINC00959A0A1B0GUT2 108 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 CCL25O15444 150 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 HSD52Q0P140 79 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 SDIM1Q6ZPB5 146 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
USP8-219ENST00000625664 IGLV4-3A0A075B6K6 122 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.1□□□□□ -1.11
USP8-219ENST00000625664 PANO1I0J062 215 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 FOXI1Q12951 378 aa8.1□□□□□ -1.11
USP8-219ENST00000625664 IGHV3-64A0A075B6Q5 118 aa8.09□□□□□ -1.11
USP8-219ENST00000625664 RNASE13Q5GAN3 156 aaKnown RBP8.09□□□□□ -1.11
USP8-219ENST00000625664 ORAOV1Q8WV07 137 aa8.09□□□□□ -1.11
USP8-219ENST00000625664 E9PLD3 99 aa8.08□□□□□ -1.12
USP8-219ENST00000625664 SS18Q15532 418 aa8.08□□□□□ -1.12
USP8-219ENST00000625664 HIGD1BQ9P298 99 aa8.08□□□□□ -1.12
USP8-219ENST00000625664 UBE2D4Q9Y2X8 147 aa8.08□□□□□ -1.12
USP8-219ENST00000625664 NPSP0C0P6 89 aa8.07□□□□□ -1.12
USP8-219ENST00000625664 Q6ZUT4 128 aa8.07□□□□□ -1.12
USP8-219ENST00000625664 GVQW2A0A096LPI5 108 aaPredicted RBP8.06□□□□□ -1.12
USP8-219ENST00000625664 A0A0J9YXV3 536 aa8.06□□□□□ -1.12
USP8-219ENST00000625664 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
USP8-219ENST00000625664 CHTF8P0CG12 524 aa8.06□□□□□ -1.12
USP8-219ENST00000625664 TSPEAR-AS2P59090 65 aa8.06□□□□□ -1.12
USP8-219ENST00000625664 SMAGPQ0VAQ4 97 aa8.06□□□□□ -1.12
USP8-219ENST00000625664 CSDC2Q9Y534 153 aaKnown RBP8.06□□□□□ -1.12
USP8-219ENST00000625664 SEC11AP67812 179 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 CD164L2Q6UWJ8 174 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 VCX2Q9H322 139 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 PYGO1Q9Y3Y4 419 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 TRAV13-1A0A0B4J241 112 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 IGHV1-58A0A0C4DH39 117 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 FXYD2P54710 66 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 PAPPA-AS1Q5QFB9 102 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 TMEM170BQ5T4T1 132 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 AMELXQ99217 191 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 TIMM21Q9BVV7 248 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 HERC1Q15751 4861 aa8.05□□□□□ -1.12
USP8-219ENST00000625664 ZNF22P17026 224 aaPredicted RBP8.04□□□□□ -1.12
USP8-219ENST00000625664 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
USP8-219ENST00000625664 COX6A2Q02221 97 aa8.04□□□□□ -1.12
USP8-219ENST00000625664 CIRBPQ14011 172 aaKnown RBP8.04□□□□□ -1.12
USP8-219ENST00000625664 TMEM223A0PJW6 202 aa8.03□□□□□ -1.12
USP8-219ENST00000625664 ZNF815PA8K554 130 aa8.03□□□□□ -1.12
USP8-219ENST00000625664 HERVK_113P61574 105 aa8.03□□□□□ -1.12
USP8-219ENST00000625664 A0A087WYN8 130 aa8.02□□□□□ -1.13
USP8-219ENST00000625664 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.13
USP8-219ENST00000625664 A6NDN8 102 aa8.02□□□□□ -1.13
USP8-219ENST00000625664 K7ERJ3 54 aa8.02□□□□□ -1.13
USP8-219ENST00000625664 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
USP8-219ENST00000625664 SPACA4Q8TDM5 124 aa8.02□□□□□ -1.13
USP8-219ENST00000625664 NAA38Q9BRA0 125 aaKnown RBP8.02□□□□□ -1.13
USP8-219ENST00000625664 SPANXA1Q9NS26 97 aa8.02□□□□□ -1.13
USP8-219ENST00000625664 H3BRM9 83 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 COX7A2LO14548 114 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 MALP21145 153 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 C5orf38Q86SI9 138 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 CEND1Q8N111 149 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 ZNF561-AS1K7EIQ3 104 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 VAMP3Q15836 100 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 RAB37Q96AX2 223 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
USP8-219ENST00000625664 LEPROTO15243 131 aa8□□□□□ -1.13
USP8-219ENST00000625664 TAL2Q16559 108 aa8□□□□□ -1.13
USP8-219ENST00000625664 HIST1H4GQ99525 98 aa8□□□□□ -1.13
USP8-219ENST00000625664 A0A096LNI7 61 aa7.99□□□□□ -1.13
USP8-219ENST00000625664 C9orf118A6NHY6 69 aa7.99□□□□□ -1.13
USP8-219ENST00000625664 J3QL48 77 aa7.99□□□□□ -1.13
USP8-219ENST00000625664 J3QQQ9 107 aa7.99□□□□□ -1.13
USP8-219ENST00000625664 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
USP8-219ENST00000625664 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
USP8-219ENST00000625664 UBE2V1Q13404 147 aa7.99□□□□□ -1.13
USP8-219ENST00000625664 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
USP8-219ENST00000625664 PTTG1IPP53801 180 aa7.98□□□□□ -1.13
USP8-219ENST00000625664 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
USP8-219ENST00000625664 H3BUT2 72 aa7.97□□□□□ -1.13
USP8-219ENST00000625664 SMIM13P0DJ93 91 aa7.97□□□□□ -1.13
USP8-219ENST00000625664 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
USP8-219ENST00000625664 UBE2D1P51668 147 aa7.97□□□□□ -1.13
USP8-219ENST00000625664 SCGB1D4Q6XE38 83 aa7.97□□□□□ -1.13
USP8-219ENST00000625664 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms