RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 TMEM89A2RUT3 159 aa10.73□□□□□ -0.69
PMS1-221ENST00000624204 INSP01308 110 aa10.73□□□□□ -0.69
PMS1-221ENST00000624204 DEFB112Q30KQ8 113 aa10.72□□□□□ -0.69
PMS1-221ENST00000624204 NOP10Q9NPE3 64 aaKnown RBP10.72□□□□□ -0.69
PMS1-221ENST00000624204 IGHV4-30-2A0A087WSY4 118 aa10.72□□□□□ -0.69
PMS1-221ENST00000624204 XCL1P47992 114 aa10.72□□□□□ -0.69
PMS1-221ENST00000624204 A0A0U1RQV1 116 aa10.72□□□□□ -0.69
PMS1-221ENST00000624204 K7EQD1 137 aa10.72□□□□□ -0.69
PMS1-221ENST00000624204 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
PMS1-221ENST00000624204 SS18Q15532 418 aa10.71□□□□□ -0.69
PMS1-221ENST00000624204 UBL5Q9BZL1 73 aa10.71□□□□□ -0.7
PMS1-221ENST00000624204 FAM19A3Q7Z5A8 133 aa10.7□□□□□ -0.7
PMS1-221ENST00000624204 NOTCH2Q04721 2471 aa10.69□□□□□ -0.7
PMS1-221ENST00000624204 RPL35AP18077 110 aaKnown RBP10.68□□□□□ -0.7
PMS1-221ENST00000624204 MAP6D1Q9H9H5 199 aa10.68□□□□□ -0.7
PMS1-221ENST00000624204 LAMTOR3Q9UHA4 124 aa10.68□□□□□ -0.7
PMS1-221ENST00000624204 IGLV10-54A0A075B6I4 117 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 NBL1P41271 181 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 LINC00336Q6ZUF6 198 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 JMJD7-PLA2G4BH0Y9G9 81 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 MSMBP08118 114 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 SETXQ7Z333 2677 aaKnown RBP10.67□□□□□ -0.7
PMS1-221ENST00000624204 F8P00451 2351 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 IBA57-AS1B1ANH7 110 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 MRAPQ8TCY5 172 aa10.67□□□□□ -0.7
PMS1-221ENST00000624204 IGLV4-60A0A075B6I1 120 aa10.66□□□□□ -0.7
PMS1-221ENST00000624204 TRBV6-4A0A1B0GX49 114 aa10.66□□□□□ -0.7
PMS1-221ENST00000624204 NDUFC2-KCTD14E9PQ53 114 aa10.66□□□□□ -0.7
PMS1-221ENST00000624204 ATP5EP2Q5VTU8 51 aa10.66□□□□□ -0.7
PMS1-221ENST00000624204 STHQ8IWL8 128 aa10.66□□□□□ -0.7
PMS1-221ENST00000624204 CCL19Q99731 98 aa10.66□□□□□ -0.7
PMS1-221ENST00000624204 WFDC10AQ9H1F0 79 aa10.65□□□□□ -0.7
PMS1-221ENST00000624204 TRGV4A0A0C4DH28 118 aa10.65□□□□□ -0.7
PMS1-221ENST00000624204 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
PMS1-221ENST00000624204 DEFB130BP0DP73 79 aa10.64□□□□□ -0.71
PMS1-221ENST00000624204 DEFB130AP0DP74 79 aa10.64□□□□□ -0.71
PMS1-221ENST00000624204 TMEM86BQ8N661 226 aa10.64□□□□□ -0.71
PMS1-221ENST00000624204 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
PMS1-221ENST00000624204 ESM1Q9NQ30 184 aa10.64□□□□□ -0.71
PMS1-221ENST00000624204 TMEM256-PLSCR3K7ERE1 68 aa10.63□□□□□ -0.71
PMS1-221ENST00000624204 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
PMS1-221ENST00000624204 Q8N814 137 aa10.63□□□□□ -0.71
PMS1-221ENST00000624204 RMI2Q96E14 147 aa10.63□□□□□ -0.71
PMS1-221ENST00000624204 H7BZZ5 65 aa10.63□□□□□ -0.71
PMS1-221ENST00000624204 RBM3P98179 157 aaKnown RBP10.62□□□□□ -0.71
PMS1-221ENST00000624204 MPLKIPQ8TAP9 179 aa10.62□□□□□ -0.71
PMS1-221ENST00000624204 SERP1Q9Y6X1 66 aa10.62□□□□□ -0.71
PMS1-221ENST00000624204 IGHV3OR16-9A0A0B4J2B5 98 aa10.62□□□□□ -0.71
PMS1-221ENST00000624204 C1orf158Q8N1D5 194 aa10.61□□□□□ -0.71
PMS1-221ENST00000624204 PRO0628Q9UI54 55 aa10.61□□□□□ -0.71
PMS1-221ENST00000624204 DAD1P61803 113 aa10.61□□□□□ -0.71
PMS1-221ENST00000624204 BRK1Q8WUW1 75 aa10.6□□□□□ -0.71
PMS1-221ENST00000624204 AKAP9Q99996 3911 aa10.6□□□□□ -0.71
PMS1-221ENST00000624204 GNLYP22749 145 aa10.59□□□□□ -0.71
PMS1-221ENST00000624204 F8WEM9 126 aa10.59□□□□□ -0.71
PMS1-221ENST00000624204 M0R2N4 97 aa10.59□□□□□ -0.71
PMS1-221ENST00000624204 UCNP55089 124 aa10.59□□□□□ -0.71
PMS1-221ENST00000624204 TRAV7A0A075B6U4 112 aa10.58□□□□□ -0.72
PMS1-221ENST00000624204 TRAV10A0A0B4J240 114 aa10.58□□□□□ -0.72
PMS1-221ENST00000624204 A0A087WZ39 114 aa10.58□□□□□ -0.72
PMS1-221ENST00000624204 J3QLI3 93 aa10.58□□□□□ -0.72
PMS1-221ENST00000624204 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
PMS1-221ENST00000624204 C6orf99Q4VX62 202 aa10.58□□□□□ -0.72
PMS1-221ENST00000624204 A0A096LNT2 108 aa10.57□□□□□ -0.72
PMS1-221ENST00000624204 LY6G6DO95868 133 aa10.57□□□□□ -0.72
PMS1-221ENST00000624204 B4DSR2 109 aa10.56□□□□□ -0.72
PMS1-221ENST00000624204 LYPD5Q6UWN5 251 aa10.55□□□□□ -0.72
PMS1-221ENST00000624204 TRBV10-3A0A0K0K1G6 114 aa10.55□□□□□ -0.72
PMS1-221ENST00000624204 LINC01547P58512 204 aaPredicted RBP10.55□□□□□ -0.72
PMS1-221ENST00000624204 NANOS2P60321 138 aaKnown RBP10.55□□□□□ -0.72
PMS1-221ENST00000624204 ODF3L2Q3SX64 289 aa10.55□□□□□ -0.72
PMS1-221ENST00000624204 CR1P17927 2039 aa10.55□□□□□ -0.72
PMS1-221ENST00000624204 LRCOL1A6NCL2 159 aa10.55□□□□□ -0.72
PMS1-221ENST00000624204 DEFB114Q30KQ6 69 aa10.55□□□□□ -0.72
PMS1-221ENST00000624204 LINC00269Q8N2A0 174 aa10.54□□□□□ -0.72
PMS1-221ENST00000624204 Q8N9L7 120 aa10.54□□□□□ -0.72
PMS1-221ENST00000624204 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
PMS1-221ENST00000624204 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
PMS1-221ENST00000624204 LINC00959A0A1B0GUT2 108 aa10.53□□□□□ -0.72
PMS1-221ENST00000624204 SMIM26A0A096LP01 95 aa10.53□□□□□ -0.72
PMS1-221ENST00000624204 FP248Q71RG6 208 aaPredicted RBP10.53□□□□□ -0.72
PMS1-221ENST00000624204 ZNF702PQ9H963 129 aa10.53□□□□□ -0.72
PMS1-221ENST00000624204 LINC00167Q96N53 147 aa10.52□□□□□ -0.72
PMS1-221ENST00000624204 Q6ZVQ6 151 aa10.52□□□□□ -0.73
PMS1-221ENST00000624204 Q8N3U1 123 aa10.52□□□□□ -0.73
PMS1-221ENST00000624204 DOPEY1Q5JWR5 2465 aa10.52□□□□□ -0.73
PMS1-221ENST00000624204 ZNF462Q96JM2 2506 aa10.52□□□□□ -0.73
PMS1-221ENST00000624204 Q6ZQT0 140 aa10.51□□□□□ -0.73
PMS1-221ENST00000624204 KLKP1Q107X0 134 aa10.51□□□□□ -0.73
PMS1-221ENST00000624204 ZNF843Q8N446 348 aa10.51□□□□□ -0.73
PMS1-221ENST00000624204 DEFB4AO15263 64 aa10.51□□□□□ -0.73
PMS1-221ENST00000624204 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
PMS1-221ENST00000624204 NBPF19A0A087WUL8 3843 aa10.5□□□□□ -0.73
PMS1-221ENST00000624204 TM2D3Q9BRN9 247 aa10.49□□□□□ -0.73
PMS1-221ENST00000624204 TRBV7-6A0A0J9YX20 115 aa10.49□□□□□ -0.73
PMS1-221ENST00000624204 LINC00482Q8N8I6 264 aa10.48□□□□□ -0.73
PMS1-221ENST00000624204 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
PMS1-221ENST00000624204 UNC79Q9P2D8 2635 aa10.47□□□□□ -0.73
PMS1-221ENST00000624204 C16orf95Q9H693 158 aa10.47□□□□□ -0.73
PMS1-221ENST00000624204 ZNF561-AS1K7EIQ3 104 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms