RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
LITAF-221ENST00000622633 LINC00308Q8TCZ7 52 aa8.8□□□□□ -1
LITAF-221ENST00000622633 CDKN2A-AS1Q9UH64 79 aa8.8□□□□□ -1
LITAF-221ENST00000622633 BCE1O60756 84 aa8.79□□□□□ -1
LITAF-221ENST00000622633 DEFB113Q30KQ7 82 aa8.79□□□□□ -1
LITAF-221ENST00000622633 ATP5EP2Q5VTU8 51 aa8.79□□□□□ -1
LITAF-221ENST00000622633 C6orf223Q8N319 242 aa8.79□□□□□ -1
LITAF-221ENST00000622633 USP24Q9UPU5 2620 aa8.79□□□□□ -1
LITAF-221ENST00000622633 S100A7L2Q5SY68 101 aa8.79□□□□□ -1
LITAF-221ENST00000622633 DGAT2L7PQ6IED9 249 aa8.79□□□□□ -1
LITAF-221ENST00000622633 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.79□□□□□ -1
LITAF-221ENST00000622633 ZNF625Q96I27 306 aaPredicted RBP8.79□□□□□ -1
LITAF-221ENST00000622633 COX6A2Q02221 97 aa8.78□□□□□ -1
LITAF-221ENST00000622633 ODF3L2Q3SX64 289 aa8.78□□□□□ -1
LITAF-221ENST00000622633 BBC3Q96PG8 261 aaPredicted RBP8.78□□□□□ -1
LITAF-221ENST00000622633 CHD6Q8TD26 2715 aa8.78□□□□□ -1
LITAF-221ENST00000622633 TRGV1A0A0A0MS02 117 aa8.77□□□□□ -1.01
LITAF-221ENST00000622633 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
LITAF-221ENST00000622633 EPG5Q9HCE0 2579 aa8.77□□□□□ -1.01
LITAF-221ENST00000622633 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1.01
LITAF-221ENST00000622633 NCR3O14931 201 aa8.77□□□□□ -1.01
LITAF-221ENST00000622633 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
LITAF-221ENST00000622633 SONP18583 2426 aaKnown RBP8.77□□□□□ -1.01
LITAF-221ENST00000622633 WNK1Q9H4A3 2382 aa8.77□□□□□ -1.01
LITAF-221ENST00000622633 NBPF19A0A087WUL8 3843 aa8.76□□□□□ -1.01
LITAF-221ENST00000622633 NDUFC1O43677 76 aa8.76□□□□□ -1.01
LITAF-221ENST00000622633 NOTCH3Q9UM47 2321 aa8.75□□□□□ -1.01
LITAF-221ENST00000622633 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 A0A087WYN8 130 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 A0A087WZ39 114 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 TRAV10A0A0B4J240 114 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 Q6ZTI0 123 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 C11orf45Q8TAV5 145 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 CUBNO60494 3623 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 NDUFA1O15239 70 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
LITAF-221ENST00000622633 DAD1P61803 113 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 UBR5O95071 2799 aaPredicted RBP8.73□□□□□ -1.01
LITAF-221ENST00000622633 CCL24O00175 119 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 ESRGQ1W209 222 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 HIST2H2BCQ6DN03 193 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 KRTAP1-3Q8IUG1 177 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 Q9H8V8 135 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 NF1P21359 2839 aa8.73□□□□□ -1.01
LITAF-221ENST00000622633 C2CD3Q4AC94 2353 aa8.72□□□□□ -1.01
LITAF-221ENST00000622633 ZNF469Q96JG9 3925 aaPredicted RBP8.72□□□□□ -1.01
LITAF-221ENST00000622633 ZNF843Q8N446 348 aa8.72□□□□□ -1.01
LITAF-221ENST00000622633 DNAJC9-AS1A6NH13 148 aa8.72□□□□□ -1.01
LITAF-221ENST00000622633 MIFP14174 115 aa8.72□□□□□ -1.01
LITAF-221ENST00000622633 RPL36AP83881 106 aaKnown RBP8.72□□□□□ -1.01
LITAF-221ENST00000622633 RPL36ALQ969Q0 106 aaKnown RBP8.72□□□□□ -1.01
LITAF-221ENST00000622633 AKAP9Q99996 3911 aa8.71□□□□□ -1.01
LITAF-221ENST00000622633 K7EQD1 137 aa8.71□□□□□ -1.01
LITAF-221ENST00000622633 NOP10Q9NPE3 64 aaKnown RBP8.71□□□□□ -1.01
LITAF-221ENST00000622633 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
LITAF-221ENST00000622633 TM2D3Q9BRN9 247 aa8.71□□□□□ -1.02
LITAF-221ENST00000622633 SETD2Q9BYW2 2564 aaPredicted RBP8.71□□□□□ -1.02
LITAF-221ENST00000622633 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
LITAF-221ENST00000622633 SMIM1B2RUZ4 78 aa8.7□□□□□ -1.02
LITAF-221ENST00000622633 ESM1Q9NQ30 184 aa8.7□□□□□ -1.02
LITAF-221ENST00000622633 APCP25054 2843 aa8.7□□□□□ -1.02
LITAF-221ENST00000622633 NIPBLQ6KC79 2804 aaeCLIP8.69□□□□□ -1.02
LITAF-221ENST00000622633 TRBV7-4A0A0J9YYF1 115 aa8.69□□□□□ -1.02
LITAF-221ENST00000622633 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
LITAF-221ENST00000622633 CCDC168Q8NDH2 2452 aa8.69□□□□□ -1.02
LITAF-221ENST00000622633 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
LITAF-221ENST00000622633 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
LITAF-221ENST00000622633 ITPR3Q14573 2671 aa8.68□□□□□ -1.02
LITAF-221ENST00000622633 GIG44P09565 113 aaPredicted RBP8.68□□□□□ -1.02
LITAF-221ENST00000622633 CDC42SE2Q9NRR3 84 aa8.68□□□□□ -1.02
LITAF-221ENST00000622633 JMJD1CQ15652 2540 aa8.68□□□□□ -1.02
LITAF-221ENST00000622633 LOC100131303A0A0U1RQF7 123 aa8.67□□□□□ -1.02
LITAF-221ENST00000622633 PLA2G2AP14555 144 aa8.66□□□□□ -1.02
LITAF-221ENST00000622633 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
LITAF-221ENST00000622633 TRGV2A0A075B6R0 118 aa8.65□□□□□ -1.02
LITAF-221ENST00000622633 SLPIP03973 132 aa8.65□□□□□ -1.02
LITAF-221ENST00000622633 UBE2L6O14933 153 aa8.65□□□□□ -1.02
LITAF-221ENST00000622633 LECT2O14960 151 aa8.65□□□□□ -1.02
LITAF-221ENST00000622633 UBL5Q9BZL1 73 aa8.65□□□□□ -1.02
LITAF-221ENST00000622633 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.03
LITAF-221ENST00000622633 Q6ZTC4 211 aa8.64□□□□□ -1.03
LITAF-221ENST00000622633 LINC00337Q8N6G1 96 aa8.64□□□□□ -1.03
LITAF-221ENST00000622633 PF4P02776 101 aa8.63□□□□□ -1.03
LITAF-221ENST00000622633 FLNAP21333 2647 aaKnown RBP8.63□□□□□ -1.03
LITAF-221ENST00000622633 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
LITAF-221ENST00000622633 Q6ZRP5 223 aa8.63□□□□□ -1.03
LITAF-221ENST00000622633 KTN1-AS1Q86SY8 53 aa8.63□□□□□ -1.03
LITAF-221ENST00000622633 LINC01006Q8NI28 216 aa8.63□□□□□ -1.03
LITAF-221ENST00000622633 SMIM11BQ8TCY0 68 aa8.63□□□□□ -1.03
LITAF-221ENST00000622633 Q1T7F1 81 aa8.62□□□□□ -1.03
LITAF-221ENST00000622633 ORMDL1Q9P0S3 153 aa8.62□□□□□ -1.03
LITAF-221ENST00000622633 H0YGX0 51 aa8.62□□□□□ -1.03
LITAF-221ENST00000622633 APOC4P55056 127 aa8.62□□□□□ -1.03
LITAF-221ENST00000622633 TMEM254Q8TBM7 123 aa8.62□□□□□ -1.03
LITAF-221ENST00000622633 C16orf74Q96GX8 76 aa8.62□□□□□ -1.03
LITAF-221ENST00000622633 C11orf68Q9H3H3 251 aaKnown RBP8.62□□□□□ -1.03
LITAF-221ENST00000622633 TRGV4A0A0C4DH28 118 aa8.61□□□□□ -1.03
LITAF-221ENST00000622633 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 1223.2 ms