RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 NRACQ8N912 160 aa9.16□□□□□ -0.94
TCF4-248ENST00000616053 COA6Q5JTJ3 125 aaKnown RBP9.16□□□□□ -0.94
TCF4-248ENST00000616053 A8MZ25 164 aa9.16□□□□□ -0.94
TCF4-248ENST00000616053 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
TCF4-248ENST00000616053 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
TCF4-248ENST00000616053 Q96NJ1 140 aa9.15□□□□□ -0.94
TCF4-248ENST00000616053 M0R2T5 61 aa9.15□□□□□ -0.94
TCF4-248ENST00000616053 WWC2-AS2Q96NR7 200 aa9.15□□□□□ -0.94
TCF4-248ENST00000616053 COL4A6Q14031 1691 aa9.15□□□□□ -0.95
TCF4-248ENST00000616053 ZNF80P51504 273 aaPredicted RBP9.15□□□□□ -0.95
TCF4-248ENST00000616053 LINC00313P59037 77 aa9.14□□□□□ -0.95
TCF4-248ENST00000616053 SSBP3-AS1Q7Z2R9 100 aa9.14□□□□□ -0.95
TCF4-248ENST00000616053 PRM2P04554 102 aa9.14□□□□□ -0.95
TCF4-248ENST00000616053 TMEM254Q8TBM7 123 aa9.14□□□□□ -0.95
TCF4-248ENST00000616053 COL24A1Q17RW2 1714 aa9.13□□□□□ -0.95
TCF4-248ENST00000616053 C1orf64Q8NEQ6 169 aa9.13□□□□□ -0.95
TCF4-248ENST00000616053 LRRK2Q5S007 2527 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 SMCR5Q8TEV8 140 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 F8WDY8 70 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 ACANP16112 2415 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 FHL3Q13643 280 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 Q6ZRP5 223 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 SIP14410 1827 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 THSD7AQ9UPZ6 1657 aa9.12□□□□□ -0.95
TCF4-248ENST00000616053 CRIPTQ9P021 101 aa9.11□□□□□ -0.95
TCF4-248ENST00000616053 LINC01554Q52M75 96 aa9.1□□□□□ -0.95
TCF4-248ENST00000616053 C1orf147Q96MC9 270 aaPredicted RBP9.1□□□□□ -0.95
TCF4-248ENST00000616053 C6orf48Q9UBA6 75 aa9.1□□□□□ -0.95
TCF4-248ENST00000616053 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
TCF4-248ENST00000616053 RTL8CO15255 209 aa9.09□□□□□ -0.95
TCF4-248ENST00000616053 ADAMTS20P59510 1910 aa9.09□□□□□ -0.96
TCF4-248ENST00000616053 ANKHD1Q8IWZ3 2542 aaKnown RBP9.08□□□□□ -0.96
TCF4-248ENST00000616053 RBM12B-AS1Q9P1G2 102 aa9.08□□□□□ -0.96
TCF4-248ENST00000616053 TRAV7A0A075B6U4 112 aa9.08□□□□□ -0.96
TCF4-248ENST00000616053 BRWD1-AS2P59051 145 aa9.07□□□□□ -0.96
TCF4-248ENST00000616053 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
TCF4-248ENST00000616053 Q8N814 137 aa9.07□□□□□ -0.96
TCF4-248ENST00000616053 TSHBP01222 138 aa9.06□□□□□ -0.96
TCF4-248ENST00000616053 PRR3P79522 188 aaKnown RBP9.06□□□□□ -0.96
TCF4-248ENST00000616053 JMJD1CQ15652 2540 aa9.06□□□□□ -0.96
TCF4-248ENST00000616053 CHTF8P0CG12 524 aa9.06□□□□□ -0.96
TCF4-248ENST00000616053 Q9UF83 564 aa9.06□□□□□ -0.96
TCF4-248ENST00000616053 LYPD5Q6UWN5 251 aa9.06□□□□□ -0.96
TCF4-248ENST00000616053 MRPS12O15235 138 aaKnown RBP9.06□□□□□ -0.96
TCF4-248ENST00000616053 C22orf24Q9Y442 160 aa9.06□□□□□ -0.96
TCF4-248ENST00000616053 TLN1Q9Y490 2541 aaKnown RBP9.05□□□□□ -0.96
TCF4-248ENST00000616053 FSTL3O95633 263 aa9.05□□□□□ -0.96
TCF4-248ENST00000616053 NAV2Q8IVL1 2488 aa9.05□□□□□ -0.96
TCF4-248ENST00000616053 LINC00242Q5T6M2 205 aa9.04□□□□□ -0.96
TCF4-248ENST00000616053 IGLV1-51P01701 117 aa9.03□□□□□ -0.96
TCF4-248ENST00000616053 TP53AIP1Q9HCN2 124 aa9.03□□□□□ -0.96
TCF4-248ENST00000616053 IGLV5-37A0A075B6J1 123 aa9.03□□□□□ -0.96
TCF4-248ENST00000616053 RAI1Q7Z5J4 1906 aaPredicted RBP9.02□□□□□ -0.97
TCF4-248ENST00000616053 VPREB1P12018 145 aa9.02□□□□□ -0.97
TCF4-248ENST00000616053 FAM19A4Q96LR4 140 aa9.02□□□□□ -0.97
TCF4-248ENST00000616053 KRTAP10-9P60411 292 aa9.02□□□□□ -0.97
TCF4-248ENST00000616053 TLN2Q9Y4G6 2542 aa9.01□□□□□ -0.97
TCF4-248ENST00000616053 COX7CP15954 63 aa9.01□□□□□ -0.97
TCF4-248ENST00000616053 Q6ZS46 218 aa9.01□□□□□ -0.97
TCF4-248ENST00000616053 Q8N6K4 173 aa9.01□□□□□ -0.97
TCF4-248ENST00000616053 NUPR1O60356 82 aa9.01□□□□□ -0.97
TCF4-248ENST00000616053 C11orf71Q6IPW1 123 aa9.01□□□□□ -0.97
TCF4-248ENST00000616053 SPATA3Q8NHX4 192 aa9.01□□□□□ -0.97
TCF4-248ENST00000616053 Q8N3U1 123 aa9□□□□□ -0.97
TCF4-248ENST00000616053 Q6ZRU5 148 aa9□□□□□ -0.97
TCF4-248ENST00000616053 A0A1W2PNU3 283 aaPredicted RBP8.99□□□□□ -0.97
TCF4-248ENST00000616053 ZNF462Q96JM2 2506 aa8.98□□□□□ -0.97
TCF4-248ENST00000616053 KIF25-AS1Q9Y6Z4 181 aa8.98□□□□□ -0.97
TCF4-248ENST00000616053 Q8NBF4 154 aa8.98□□□□□ -0.97
TCF4-248ENST00000616053 C16orf95Q9H693 158 aa8.97□□□□□ -0.97
TCF4-248ENST00000616053 CPAMD8Q8IZJ3 1885 aa8.97□□□□□ -0.97
TCF4-248ENST00000616053 ODF3L2Q3SX64 289 aa8.97□□□□□ -0.97
TCF4-248ENST00000616053 CR1P17927 2039 aa8.97□□□□□ -0.97
TCF4-248ENST00000616053 WISP2O76076 250 aa8.97□□□□□ -0.97
TCF4-248ENST00000616053 C9orf129Q5T035 196 aaKnown RBP8.97□□□□□ -0.97
TCF4-248ENST00000616053 IGLV4-60A0A075B6I1 120 aa8.97□□□□□ -0.97
TCF4-248ENST00000616053 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
TCF4-248ENST00000616053 EPM2AB3EWF7 344 aa8.95□□□□□ -0.98
TCF4-248ENST00000616053 IGLV1-40P01703 118 aa8.95□□□□□ -0.98
TCF4-248ENST00000616053 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
TCF4-248ENST00000616053 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
TCF4-248ENST00000616053 IGLV6-57P01721 117 aa8.94□□□□□ -0.98
TCF4-248ENST00000616053 LINC00315P59091 139 aa8.94□□□□□ -0.98
TCF4-248ENST00000616053 NBDYA0A0U1RRE5 68 aa8.94□□□□□ -0.98
TCF4-248ENST00000616053 LUZP6Q538Z0 58 aa8.94□□□□□ -0.98
TCF4-248ENST00000616053 KRTAP27-1Q3LI81 207 aa8.94□□□□□ -0.98
TCF4-248ENST00000616053 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
TCF4-248ENST00000616053 CSNK1G2-AS1Q8NCQ2 148 aa8.93□□□□□ -0.98
TCF4-248ENST00000616053 MAPKAPK5-AS1Q8N8E1 139 aa8.93□□□□□ -0.98
TCF4-248ENST00000616053 KLLNB2CW77 178 aa8.93□□□□□ -0.98
TCF4-248ENST00000616053 PCSK5Q92824 1860 aa8.92□□□□□ -0.98
TCF4-248ENST00000616053 A0A087WYN8 130 aa8.92□□□□□ -0.98
TCF4-248ENST00000616053 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
TCF4-248ENST00000616053 Q6ZSN1 163 aa8.91□□□□□ -0.98
TCF4-248ENST00000616053 COL4A1P02462 1669 aa8.91□□□□□ -0.98
TCF4-248ENST00000616053 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
TCF4-248ENST00000616053 A8MTW9 85 aa8.91□□□□□ -0.98
TCF4-248ENST00000616053 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
TCF4-248ENST00000616053 THSD7BQ9C0I4 1608 aa8.9□□□□□ -0.98
TCF4-248ENST00000616053 COL5A1P20908 1838 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms