RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 AVPP01185 164 aa7.39□□□□□ -1.23
TNFAIP3-208ENST00000615468 MSMBP08118 114 aa7.39□□□□□ -1.23
TNFAIP3-208ENST00000615468 JMJD1CQ15652 2540 aa7.38□□□□□ -1.23
TNFAIP3-208ENST00000615468 TRGV1A0A0A0MS02 117 aa7.38□□□□□ -1.23
TNFAIP3-208ENST00000615468 TRBV7-6A0A0J9YX20 115 aa7.38□□□□□ -1.23
TNFAIP3-208ENST00000615468 TEX15Q9BXT5 2789 aa7.38□□□□□ -1.23
TNFAIP3-208ENST00000615468 KLK9Q2XQG4 91 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 C6orf226Q5I0X4 101 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 FP248Q71RG6 208 aaPredicted RBP7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 Q96MF0 132 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 FLNAP21333 2647 aaKnown RBP7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 K7EQG2 157 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 SS18Q15532 418 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 SCXQ7RTU7 201 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 FLNBO75369 2602 aaKnown RBP7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 C11orf44Q8N8P7 122 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 CUBNO60494 3623 aa7.37□□□□□ -1.23
TNFAIP3-208ENST00000615468 TRAV10A0A0B4J240 114 aa7.36□□□□□ -1.23
TNFAIP3-208ENST00000615468 IGHV4-59P01825 116 aa7.36□□□□□ -1.23
TNFAIP3-208ENST00000615468 TMEM256-PLSCR3K7ERE1 68 aa7.36□□□□□ -1.23
TNFAIP3-208ENST00000615468 LYPD5Q6UWN5 251 aa7.36□□□□□ -1.23
TNFAIP3-208ENST00000615468 B4DSR2 109 aa7.36□□□□□ -1.23
TNFAIP3-208ENST00000615468 K7EMT4 169 aa7.36□□□□□ -1.23
TNFAIP3-208ENST00000615468 OBSCN-AS1Q96MR7 158 aa7.35□□□□□ -1.23
TNFAIP3-208ENST00000615468 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
TNFAIP3-208ENST00000615468 PRR3P79522 188 aaKnown RBP7.35□□□□□ -1.23
TNFAIP3-208ENST00000615468 C10orf99Q6UWK7 81 aa7.35□□□□□ -1.23
TNFAIP3-208ENST00000615468 UBE2E2Q96LR5 201 aa7.35□□□□□ -1.23
TNFAIP3-208ENST00000615468 FBN2P35556 2912 aa7.35□□□□□ -1.23
TNFAIP3-208ENST00000615468 DEFB112Q30KQ8 113 aa7.35□□□□□ -1.23
TNFAIP3-208ENST00000615468 CDC42SE2Q9NRR3 84 aa7.34□□□□□ -1.23
TNFAIP3-208ENST00000615468 ITPR2Q14571 2701 aa7.33□□□□□ -1.24
TNFAIP3-208ENST00000615468 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
TNFAIP3-208ENST00000615468 FN1P02751 2386 aaKnown RBP7.33□□□□□ -1.24
TNFAIP3-208ENST00000615468 H3BUA1 57 aa7.32□□□□□ -1.24
TNFAIP3-208ENST00000615468 Q8N3U1 123 aa7.32□□□□□ -1.24
TNFAIP3-208ENST00000615468 Q8N814 137 aa7.32□□□□□ -1.24
TNFAIP3-208ENST00000615468 HIVEP2P31629 2446 aa7.32□□□□□ -1.24
TNFAIP3-208ENST00000615468 MIFP14174 115 aa7.32□□□□□ -1.24
TNFAIP3-208ENST00000615468 LINC01547P58512 204 aaPredicted RBP7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 DAD1P61803 113 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 TRBV6-4A0A1B0GX49 114 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 KLKP1Q107X0 134 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 C16orf95Q9H693 158 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 IBA57-AS1B1ANH7 110 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 NTM-AS1Q6ZSK4 140 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 LINC01356Q8N9X3 169 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 TM2D3Q9BRN9 247 aa7.31□□□□□ -1.24
TNFAIP3-208ENST00000615468 TRBV10-3A0A0K0K1G6 114 aa7.3□□□□□ -1.24
TNFAIP3-208ENST00000615468 NF1P21359 2839 aa7.3□□□□□ -1.24
TNFAIP3-208ENST00000615468 LINC00482Q8N8I6 264 aa7.3□□□□□ -1.24
TNFAIP3-208ENST00000615468 LRCOL1A6NCL2 159 aa7.29□□□□□ -1.24
TNFAIP3-208ENST00000615468 APCP25054 2843 aa7.29□□□□□ -1.24
TNFAIP3-208ENST00000615468 C6orf99Q4VX62 202 aa7.29□□□□□ -1.24
TNFAIP3-208ENST00000615468 A0A1W2PRX2 142 aa7.29□□□□□ -1.24
TNFAIP3-208ENST00000615468 K7EQD1 137 aa7.29□□□□□ -1.24
TNFAIP3-208ENST00000615468 INSP01308 110 aa7.29□□□□□ -1.24
TNFAIP3-208ENST00000615468 Q6ZVQ6 151 aa7.29□□□□□ -1.24
TNFAIP3-208ENST00000615468 TRGV2A0A075B6R0 118 aa7.28□□□□□ -1.24
TNFAIP3-208ENST00000615468 TRBV10-1A0A0K0K1A3 114 aa7.28□□□□□ -1.24
TNFAIP3-208ENST00000615468 NDUFC1O43677 76 aa7.28□□□□□ -1.24
TNFAIP3-208ENST00000615468 DEFB136Q30KP8 78 aa7.28□□□□□ -1.24
TNFAIP3-208ENST00000615468 IL17DQ8TAD2 202 aa7.28□□□□□ -1.24
TNFAIP3-208ENST00000615468 MXRA5Q9NR99 2828 aa7.28□□□□□ -1.24
TNFAIP3-208ENST00000615468 CLPSL2Q6UWE3 100 aa7.28□□□□□ -1.24
TNFAIP3-208ENST00000615468 A8MTW9 85 aa7.27□□□□□ -1.25
TNFAIP3-208ENST00000615468 IGLV1-40P01703 118 aa7.27□□□□□ -1.25
TNFAIP3-208ENST00000615468 DYNLRB2Q8TF09 96 aa7.27□□□□□ -1.25
TNFAIP3-208ENST00000615468 A0A087WZ39 114 aa7.27□□□□□ -1.25
TNFAIP3-208ENST00000615468 M0R2N4 97 aa7.27□□□□□ -1.25
TNFAIP3-208ENST00000615468 DEFB113Q30KQ7 82 aa7.27□□□□□ -1.25
TNFAIP3-208ENST00000615468 NREPQ16612 68 aa7.26□□□□□ -1.25
TNFAIP3-208ENST00000615468 EPM2AB3EWF7 344 aa7.26□□□□□ -1.25
TNFAIP3-208ENST00000615468 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
TNFAIP3-208ENST00000615468 LOC100131303A0A0U1RQF7 123 aa7.26□□□□□ -1.25
TNFAIP3-208ENST00000615468 GCN1Q92616 2671 aaKnown RBP7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 IGLV4-60A0A075B6I1 120 aa7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 FUSP35637 526 aaKnown RBP eCLIP7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 FAM229BQ4G0N7 80 aa7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 TENM4Q6N022 2769 aa7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 TRGV4A0A0C4DH28 118 aa7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 A6NDX4 124 aa7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 NOP10Q9NPE3 64 aaKnown RBP7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 UNC79Q9P2D8 2635 aa7.25□□□□□ -1.25
TNFAIP3-208ENST00000615468 UBR5O95071 2799 aaPredicted RBP7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 SLURP1P55000 103 aa7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 ATP5EP56381 51 aaPredicted RBP7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 DSCR9P59020 149 aa7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 J3QKU1 62 aa7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 PRB2P02812 416 aaPredicted RBP7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 IGHV4-31P0DP07 118 aa7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 Q6ZQT0 140 aa7.24□□□□□ -1.25
TNFAIP3-208ENST00000615468 BPY2O14599 106 aa7.23□□□□□ -1.25
TNFAIP3-208ENST00000615468 Q8N9L7 120 aa7.23□□□□□ -1.25
TNFAIP3-208ENST00000615468 BCE1O60756 84 aa7.23□□□□□ -1.25
TNFAIP3-208ENST00000615468 STHQ8IWL8 128 aa7.23□□□□□ -1.25
TNFAIP3-208ENST00000615468 TMEM89A2RUT3 159 aa7.22□□□□□ -1.25
TNFAIP3-208ENST00000615468 Q6ZQY7 126 aa7.22□□□□□ -1.25
TNFAIP3-208ENST00000615468 C18orf65Q6ZTR6 163 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms