RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TRAV10A0A0B4J240 114 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 TRBV6-5A0A0K0K1A5 114 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 IGKV4-1P06312 121 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 IL9P15248 144 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 RPL38P63173 70 aaKnown RBP2.51□□□□□ -2.01
LINC00397-202ENST00000606785 Q6ZS52 159 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 ZNF833PQ6ZTB9 187 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 RPS27LQ71UM5 84 aaKnown RBP2.51□□□□□ -2.01
LINC00397-202ENST00000606785 Q9BRP9 147 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 UBL5Q9BZL1 73 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 TMEM167BQ9NRX6 74 aa2.51□□□□□ -2.01
LINC00397-202ENST00000606785 TNRC6BQ9UPQ9 1833 aaKnown RBP2.51□□□□□ -2.01
LINC00397-202ENST00000606785 MDC1Q14676 2089 aaKnown RBP2.51□□□□□ -2.01
LINC00397-202ENST00000606785 IGHV1-18A0A0C4DH31 117 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 TRBV10-1A0A0K0K1A3 114 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 NDUFB1O75438 58 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 CSAG1Q6PB30 78 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 ENHOQ6UWT2 76 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.5□□□□□ -2.01
LINC00397-202ENST00000606785 BRD3OSQ6XYD6 125 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 Q8TAT8 98 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 CCL26Q9Y258 94 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 LHFPL6Q9Y693 200 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 MYO7BQ6PIF6 2116 aa2.5□□□□□ -2.01
LINC00397-202ENST00000606785 HEATR5BQ9P2D3 2071 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 CLPSL1A2RUU4 121 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 IGIPA6NJ69 53 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 I3L3M4 83 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 SPAG11BQ08648 103 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 SPAG11AQ6PDA7 123 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 Q86TA4 180 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 FDCSPQ8NFU4 85 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 TET1Q8NFU7 2136 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 AMELXQ99217 191 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 TMEM14CQ9P0S9 112 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 ARHGAP32A7KAX9 2087 aa2.49□□□□□ -2.01
LINC00397-202ENST00000606785 M0R1W7 72 aa2.48□□□□□ -2.01
LINC00397-202ENST00000606785 ARL14EPLP0DKL9 152 aa2.48□□□□□ -2.01
LINC00397-202ENST00000606785 ZGRF1Q86YA3 2104 aa2.47□□□□□ -2.01
LINC00397-202ENST00000606785 LCE6AA0A183 80 aa2.47□□□□□ -2.01
LINC00397-202ENST00000606785 JMJD7-PLA2G4BH0Y9G9 81 aa2.47□□□□□ -2.01
LINC00397-202ENST00000606785 NDUFA3O95167 84 aa2.47□□□□□ -2.01
LINC00397-202ENST00000606785 DEFB113Q30KQ7 82 aa2.47□□□□□ -2.01
LINC00397-202ENST00000606785 C1orf137Q5JT78 98 aa2.47□□□□□ -2.01
LINC00397-202ENST00000606785 LINC01558Q9Y6Z2 57 aa2.47□□□□□ -2.01
LINC00397-202ENST00000606785 TRAV21A0A0B4J279 112 aa2.46□□□□□ -2.02
LINC00397-202ENST00000606785 M0R3E3 92 aa2.46□□□□□ -2.02
LINC00397-202ENST00000606785 CNBPP62633 177 aaKnown RBP2.46□□□□□ -2.02
LINC00397-202ENST00000606785 DMAC1Q96GE9 116 aa2.46□□□□□ -2.02
LINC00397-202ENST00000606785 PLAC8Q9NZF1 115 aa2.46□□□□□ -2.02
LINC00397-202ENST00000606785 PI4KAP42356 2102 aa2.45□□□□□ -2.02
LINC00397-202ENST00000606785 MALRD1Q5VYJ5 2156 aa2.45□□□□□ -2.02
LINC00397-202ENST00000606785 CPSF4LA6NMK7 179 aaKnown RBP2.45□□□□□ -2.02
LINC00397-202ENST00000606785 M0R135 149 aa2.45□□□□□ -2.02
LINC00397-202ENST00000606785 ZNF137PP52743 207 aa2.45□□□□□ -2.02
LINC00397-202ENST00000606785 KRTAP26-1Q6PEX3 210 aa2.45□□□□□ -2.02
LINC00397-202ENST00000606785 LINC00208Q96KT6 92 aa2.45□□□□□ -2.02
LINC00397-202ENST00000606785 IGHV3-64A0A075B6Q5 118 aa2.44□□□□□ -2.02
LINC00397-202ENST00000606785 WFDC9Q8NEX5 89 aa2.44□□□□□ -2.02
LINC00397-202ENST00000606785 COX7B2Q8TF08 81 aa2.44□□□□□ -2.02
LINC00397-202ENST00000606785 ZCCHC13Q8WW36 166 aaKnown RBP2.44□□□□□ -2.02
LINC00397-202ENST00000606785 TTTY12Q9BZ98 90 aa2.44□□□□□ -2.02
LINC00397-202ENST00000606785 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
LINC00397-202ENST00000606785 ARFGEF3Q5TH69 2177 aa2.44□□□□□ -2.02
LINC00397-202ENST00000606785 INTS1Q8N201 2190 aaKnown RBP2.43□□□□□ -2.02
LINC00397-202ENST00000606785 CR1P17927 2039 aa2.43□□□□□ -2.02
LINC00397-202ENST00000606785 TRBV6-1A0A0K0K1D8 114 aa2.43□□□□□ -2.02
LINC00397-202ENST00000606785 NUPR2A6NF83 97 aa2.43□□□□□ -2.02
LINC00397-202ENST00000606785 TFF3Q07654 80 aa2.43□□□□□ -2.02
LINC00397-202ENST00000606785 R4GMQ9 66 aa2.43□□□□□ -2.02
LINC00397-202ENST00000606785 H0YGX0 51 aa2.42□□□□□ -2.02
LINC00397-202ENST00000606785 PDE6GP18545 87 aa2.42□□□□□ -2.02
LINC00397-202ENST00000606785 ERHP84090 104 aaKnown RBP2.42□□□□□ -2.02
LINC00397-202ENST00000606785 ESPL1Q14674 2120 aa2.42□□□□□ -2.02
LINC00397-202ENST00000606785 DIDO1Q9BTC0 2240 aaKnown RBP2.41□□□□□ -2.02
LINC00397-202ENST00000606785 FREM3P0C091 2139 aa2.41□□□□□ -2.02
LINC00397-202ENST00000606785 CEP192Q8TEP8 1941 aa2.41□□□□□ -2.02
LINC00397-202ENST00000606785 H0Y9P7 68 aa2.41□□□□□ -2.02
LINC00397-202ENST00000606785 IAPPP10997 89 aa2.41□□□□□ -2.02
LINC00397-202ENST00000606785 ARHGAP5-AS1Q96IT6 56 aa2.41□□□□□ -2.02
LINC00397-202ENST00000606785 WFDC10AQ9H1F0 79 aa2.41□□□□□ -2.02
LINC00397-202ENST00000606785 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
LINC00397-202ENST00000606785 KIAA0100Q14667 2235 aaKnown RBP2.4□□□□□ -2.03
LINC00397-202ENST00000606785 IGKV3-7A0A075B6H7 116 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 TRGV4A0A0C4DH28 118 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 UQCR11O14957 56 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 MGPP08493 103 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 CCL18P55774 89 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 SPINK7P58062 85 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 FXYD4P59646 89 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 PDE6HQ13956 83 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 C10orf113Q5VZT2 155 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 LINC00322Q6ZN03 302 aaPredicted RBP2.4□□□□□ -2.03
LINC00397-202ENST00000606785 TTTY10Q9BZA0 68 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 MED12Q93074 2177 aa2.4□□□□□ -2.03
LINC00397-202ENST00000606785 CCL3L1P16619 93 aa2.39□□□□□ -2.03
LINC00397-202ENST00000606785 DEFB114Q30KQ6 69 aa2.39□□□□□ -2.03
LINC00397-202ENST00000606785 SPATA8Q6RVD6 105 aa2.39□□□□□ -2.03
LINC00397-202ENST00000606785 ZNF625Q96I27 306 aaPredicted RBP2.39□□□□□ -2.03
LINC00397-202ENST00000606785 GAFA1Q96PS6 74 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms