RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 IGHV1-3A0A0C4DH29 117 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 DNAH10OSP0CZ25 163 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 SPINK7P58062 85 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 Q6ZTI0 123 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 SMIM29Q86T20 159 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 ZGRF1Q86YA3 2104 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 Q8TAT8 98 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
LSM1P2-201ENST00000604911 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 H3BRN7 92 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 IGHV1-46P01743 117 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 MGPP08493 103 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 P0C880 135 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 PDE4DIPQ5VU43 2346 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 DNAJC13O75165 2243 aa3.74□□□□□ -1.81
LSM1P2-201ENST00000604911 IGLV4-3A0A075B6K6 122 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 IGHV3-64A0A075B6Q5 118 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 TRGV4A0A0C4DH28 118 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 A0A1B0GUV1 79 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 A6NDX4 124 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 UQCR11O14957 56 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 COA5Q86WW8 74 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 Q8N9W7 124 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
LSM1P2-201ENST00000604911 COL4A5P29400 1685 aa3.72□□□□□ -1.81
LSM1P2-201ENST00000604911 IGLV4-60A0A075B6I1 120 aa3.72□□□□□ -1.81
LSM1P2-201ENST00000604911 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.72□□□□□ -1.81
LSM1P2-201ENST00000604911 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
LSM1P2-201ENST00000604911 DEFB112Q30KQ8 113 aa3.72□□□□□ -1.81
LSM1P2-201ENST00000604911 RPL39P62891 51 aaKnown RBP3.71□□□□□ -1.82
LSM1P2-201ENST00000604911 KRTAP24-1Q3LI83 254 aa3.71□□□□□ -1.82
LSM1P2-201ENST00000604911 RPL39LQ96EH5 51 aaKnown RBP3.71□□□□□ -1.82
LSM1P2-201ENST00000604911 KIAA0100Q14667 2235 aaKnown RBP3.71□□□□□ -1.82
LSM1P2-201ENST00000604911 ZNF407Q9C0G0 2248 aa3.71□□□□□ -1.82
LSM1P2-201ENST00000604911 DOCK10Q96BY6 2186 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 CACNA1AO00555 2505 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 IGLV7-46A0A075B6I9 117 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 IGKV3D-11A0A0A0MRZ8 115 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 ODF3BA8MYP8 253 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 CCL18P55774 89 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 SPRR4Q96PI1 79 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 DEFB126Q9BYW3 111 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 CUL9Q8IWT3 2517 aa3.7□□□□□ -1.82
LSM1P2-201ENST00000604911 IGLV11-55A0A075B6I3 123 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 LINC01565O15544 149 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 COX7BP24311 80 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 LYZP61626 148 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 DEFB113Q30KQ7 82 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 DEFB134Q4QY38 66 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 KRTAP26-1Q6PEX3 210 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 DHRS4-AS1Q9P1J3 65 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 CACNA1DQ01668 2161 aa3.69□□□□□ -1.82
LSM1P2-201ENST00000604911 IGKV2-28A0A075B6P5 120 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 A0A1B0GVX0 72 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 NUPR2A6NF83 97 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 IGKV2D-28P01615 120 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 TMEM105Q8N8V8 129 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 TMEM167AQ8TBQ9 72 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 TNCP24821 2201 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 COL6A3P12111 3177 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 SZT2Q5T011 3432 aa3.68□□□□□ -1.82
LSM1P2-201ENST00000604911 CR1P17927 2039 aa3.67□□□□□ -1.82
LSM1P2-201ENST00000604911 IGKV2-40A0A087WW87 121 aaPredicted RBP3.67□□□□□ -1.82
LSM1P2-201ENST00000604911 TRBV6-4A0A1B0GX49 114 aa3.67□□□□□ -1.82
LSM1P2-201ENST00000604911 IGKV2D-40P01614 121 aaPredicted RBP3.67□□□□□ -1.82
LSM1P2-201ENST00000604911 LINC01006Q8NI28 216 aa3.67□□□□□ -1.82
LSM1P2-201ENST00000604911 A0A0C4DFX4 3053 aa3.67□□□□□ -1.82
LSM1P2-201ENST00000604911 SPAG17Q6Q759 2223 aa3.67□□□□□ -1.82
LSM1P2-201ENST00000604911 PRR14LQ5THK1 2151 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 NOTCH3Q9UM47 2321 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 KNTC1P50748 2209 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 LINC00959A0A1B0GUT2 108 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 CCL3L1P16619 93 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 CIRBP-AS1Q8TBR5 109 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 UNC13CQ8NB66 2214 aa3.66□□□□□ -1.82
LSM1P2-201ENST00000604911 PRAC2D3DTV9 90 aa3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 MRPL33O75394 65 aaKnown RBP3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 RNASE3P12724 160 aaKnown RBP3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 LINC00158P58513 81 aa3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 C9orf163Q8N9P6 203 aa3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 ZFHX3Q15911 3703 aa3.65□□□□□ -1.83
LSM1P2-201ENST00000604911 SDK2Q58EX2 2172 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 ZNF861PO60384 105 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 LINC00315P59091 139 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 WT1-ASQ06250 92 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 LINC00575Q6W349 94 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 SVILO95425 2214 aa3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 DIDO1Q9BTC0 2240 aaKnown RBP3.64□□□□□ -1.83
LSM1P2-201ENST00000604911 PRRC2BQ5JSZ5 2229 aaKnown RBP3.63□□□□□ -1.83
LSM1P2-201ENST00000604911 IGKV3-7A0A075B6H7 116 aa3.63□□□□□ -1.83
LSM1P2-201ENST00000604911 A8MUU9 505 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms