RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C9JAW5 83 aa11.87□□□□□ -0.51
PPFIA3-207ENST00000602716 TIMM17BO60830 172 aa11.87□□□□□ -0.51
PPFIA3-207ENST00000602716 DNAH7Q8WXX0 4024 aa11.86□□□□□ -0.51
PPFIA3-207ENST00000602716 LELP1Q5T871 98 aa11.86□□□□□ -0.51
PPFIA3-207ENST00000602716 TRIAP1O43715 76 aa11.86□□□□□ -0.51
PPFIA3-207ENST00000602716 ATXN8Q156A1 80 aa11.86□□□□□ -0.51
PPFIA3-207ENST00000602716 CSMD3Q7Z407 3707 aa11.86□□□□□ -0.51
PPFIA3-207ENST00000602716 NDUFA1O15239 70 aa11.85□□□□□ -0.51
PPFIA3-207ENST00000602716 DGAT2L7PQ6IED9 249 aa11.85□□□□□ -0.51
PPFIA3-207ENST00000602716 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
PPFIA3-207ENST00000602716 WFDC10BQ8IUB3 73 aa11.84□□□□□ -0.51
PPFIA3-207ENST00000602716 CDC42SE2Q9NRR3 84 aa11.84□□□□□ -0.51
PPFIA3-207ENST00000602716 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
PPFIA3-207ENST00000602716 LINC01620Q4KN68 170 aa11.84□□□□□ -0.51
PPFIA3-207ENST00000602716 STARD9Q9P2P6 4700 aa11.84□□□□□ -0.51
PPFIA3-207ENST00000602716 H7C423 109 aa11.83□□□□□ -0.52
PPFIA3-207ENST00000602716 COX6A2Q02221 97 aa11.83□□□□□ -0.52
PPFIA3-207ENST00000602716 LINC01600Q96MT4 127 aa11.83□□□□□ -0.52
PPFIA3-207ENST00000602716 CSDC2Q9Y534 153 aaKnown RBP11.83□□□□□ -0.52
PPFIA3-207ENST00000602716 IGLV5-39A0A0G2JS06 123 aa11.82□□□□□ -0.52
PPFIA3-207ENST00000602716 IFITM1P13164 125 aa11.82□□□□□ -0.52
PPFIA3-207ENST00000602716 LINC00242Q5T6M2 205 aa11.82□□□□□ -0.52
PPFIA3-207ENST00000602716 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
PPFIA3-207ENST00000602716 C15orf53Q8NAA6 179 aa11.82□□□□□ -0.52
PPFIA3-207ENST00000602716 NPC2P61916 151 aa11.82□□□□□ -0.52
PPFIA3-207ENST00000602716 HERVK_113P63121 156 aa11.82□□□□□ -0.52
PPFIA3-207ENST00000602716 CLPSL2Q6UWE3 100 aa11.81□□□□□ -0.52
PPFIA3-207ENST00000602716 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
PPFIA3-207ENST00000602716 IGKV3OR2-268A0A0C4DH90 116 aa11.8□□□□□ -0.52
PPFIA3-207ENST00000602716 XGP55808 180 aa11.8□□□□□ -0.52
PPFIA3-207ENST00000602716 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
PPFIA3-207ENST00000602716 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
PPFIA3-207ENST00000602716 LINC00588Q9Y4M8 146 aa11.79□□□□□ -0.52
PPFIA3-207ENST00000602716 TRBV10-2A0A0K0K1G8 114 aa11.79□□□□□ -0.52
PPFIA3-207ENST00000602716 DAND5Q8N907 189 aa11.79□□□□□ -0.52
PPFIA3-207ENST00000602716 APLNQ9ULZ1 77 aa11.78□□□□□ -0.52
PPFIA3-207ENST00000602716 A0A1B0GUV1 79 aa11.77□□□□□ -0.52
PPFIA3-207ENST00000602716 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.52
PPFIA3-207ENST00000602716 CKS1BP61024 79 aa11.77□□□□□ -0.52
PPFIA3-207ENST00000602716 LYSTQ99698 3801 aa11.77□□□□□ -0.52
PPFIA3-207ENST00000602716 Q9H8V8 135 aa11.77□□□□□ -0.52
PPFIA3-207ENST00000602716 RPL13AP40429 203 aaKnown RBP11.77□□□□□ -0.53
PPFIA3-207ENST00000602716 CIRBPQ14011 172 aaKnown RBP11.77□□□□□ -0.53
PPFIA3-207ENST00000602716 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.53
PPFIA3-207ENST00000602716 TGP01266 2768 aa11.76□□□□□ -0.53
PPFIA3-207ENST00000602716 COX6CP09669 75 aa11.76□□□□□ -0.53
PPFIA3-207ENST00000602716 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
PPFIA3-207ENST00000602716 LINC00269Q8N2A0 174 aa11.76□□□□□ -0.53
PPFIA3-207ENST00000602716 NUPR2A6NF83 97 aa11.75□□□□□ -0.53
PPFIA3-207ENST00000602716 LINC00308Q8TCZ7 52 aa11.75□□□□□ -0.53
PPFIA3-207ENST00000602716 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
PPFIA3-207ENST00000602716 LST1O00453 97 aa11.73□□□□□ -0.53
PPFIA3-207ENST00000602716 ZNF625Q96I27 306 aaPredicted RBP11.73□□□□□ -0.53
PPFIA3-207ENST00000602716 KLK12Q9UKR0 248 aa11.73□□□□□ -0.53
PPFIA3-207ENST00000602716 TEX49A0A1B0GTD5 131 aa11.72□□□□□ -0.53
PPFIA3-207ENST00000602716 LINC00959A0A1B0GUT2 108 aa11.72□□□□□ -0.53
PPFIA3-207ENST00000602716 H3BT86 120 aa11.72□□□□□ -0.53
PPFIA3-207ENST00000602716 CCL18P55774 89 aa11.72□□□□□ -0.53
PPFIA3-207ENST00000602716 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
PPFIA3-207ENST00000602716 DNAH1Q9P2D7 4330 aa11.71□□□□□ -0.54
PPFIA3-207ENST00000602716 IGLV10-54A0A075B6I4 117 aa11.7□□□□□ -0.54
PPFIA3-207ENST00000602716 REG3AQ06141 175 aa11.7□□□□□ -0.54
PPFIA3-207ENST00000602716 SOSTDC1Q6X4U4 206 aa11.7□□□□□ -0.54
PPFIA3-207ENST00000602716 UBE2WQ96B02 151 aa11.7□□□□□ -0.54
PPFIA3-207ENST00000602716 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
PPFIA3-207ENST00000602716 ENHOQ6UWT2 76 aa11.7□□□□□ -0.54
PPFIA3-207ENST00000602716 COPS9Q8WXC6 57 aa11.7□□□□□ -0.54
PPFIA3-207ENST00000602716 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
PPFIA3-207ENST00000602716 KLK5Q9Y337 293 aaPredicted RBP11.69□□□□□ -0.54
PPFIA3-207ENST00000602716 A0A0U1RRA0 63 aa11.69□□□□□ -0.54
PPFIA3-207ENST00000602716 HERV-K104P63124 156 aa11.69□□□□□ -0.54
PPFIA3-207ENST00000602716 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
PPFIA3-207ENST00000602716 XCL1P47992 114 aa11.68□□□□□ -0.54
PPFIA3-207ENST00000602716 MUC7Q8TAX7 377 aa11.68□□□□□ -0.54
PPFIA3-207ENST00000602716 DNAH10OSP0CZ25 163 aa11.67□□□□□ -0.54
PPFIA3-207ENST00000602716 MEIG1Q5JSS6 88 aa11.67□□□□□ -0.54
PPFIA3-207ENST00000602716 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
PPFIA3-207ENST00000602716 PPDPFQ9H3Y8 114 aa11.67□□□□□ -0.54
PPFIA3-207ENST00000602716 TRAV8-4A0A0B4J246 113 aa11.66□□□□□ -0.54
PPFIA3-207ENST00000602716 TENM2Q9NT68 2774 aa11.65□□□□□ -0.54
PPFIA3-207ENST00000602716 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
PPFIA3-207ENST00000602716 IGHV3OR16-9A0A0B4J2B5 98 aa11.64□□□□□ -0.55
PPFIA3-207ENST00000602716 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
PPFIA3-207ENST00000602716 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
PPFIA3-207ENST00000602716 COX7A2LO14548 114 aa11.64□□□□□ -0.55
PPFIA3-207ENST00000602716 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
PPFIA3-207ENST00000602716 WWC2-AS2Q96NR7 200 aa11.64□□□□□ -0.55
PPFIA3-207ENST00000602716 VPS13DQ5THJ4 4388 aa11.63□□□□□ -0.55
PPFIA3-207ENST00000602716 CRPP02741 224 aa11.63□□□□□ -0.55
PPFIA3-207ENST00000602716 SS18Q15532 418 aa11.63□□□□□ -0.55
PPFIA3-207ENST00000602716 COX7B2Q8TF08 81 aa11.62□□□□□ -0.55
PPFIA3-207ENST00000602716 Q9HAA7 133 aa11.6□□□□□ -0.55
PPFIA3-207ENST00000602716 SNCGO76070 127 aa11.6□□□□□ -0.55
PPFIA3-207ENST00000602716 KRTAP26-1Q6PEX3 210 aa11.6□□□□□ -0.55
PPFIA3-207ENST00000602716 A0A087WZ39 114 aa11.59□□□□□ -0.55
PPFIA3-207ENST00000602716 FAM240AA0A1B0GVK7 77 aa11.59□□□□□ -0.55
PPFIA3-207ENST00000602716 CD164L2Q6UWJ8 174 aa11.59□□□□□ -0.55
PPFIA3-207ENST00000602716 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
PPFIA3-207ENST00000602716 TRACP01848 142 aa11.57□□□□□ -0.56
PPFIA3-207ENST00000602716 GAGE2BQ13066 116 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms