RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 Q6ZRP5 223 aa10.07□□□□□ -0.8
CCDC61-208ENST00000601763 FAM19A2Q8N3H0 131 aa10.07□□□□□ -0.8
CCDC61-208ENST00000601763 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
CCDC61-208ENST00000601763 FAM168BA1KXE4 195 aa10.05□□□□□ -0.8
CCDC61-208ENST00000601763 SEC11AP67812 179 aa10.05□□□□□ -0.8
CCDC61-208ENST00000601763 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
CCDC61-208ENST00000601763 SERF1AO75920 110 aa10.04□□□□□ -0.8
CCDC61-208ENST00000601763 IGLC3P0DOY3 106 aa10.04□□□□□ -0.8
CCDC61-208ENST00000601763 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
CCDC61-208ENST00000601763 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
CCDC61-208ENST00000601763 Q8IZM0 81 aa10.04□□□□□ -0.8
CCDC61-208ENST00000601763 C11orf86A6NJI1 115 aa10.03□□□□□ -0.8
CCDC61-208ENST00000601763 F8WDY8 70 aa10.03□□□□□ -0.8
CCDC61-208ENST00000601763 PRSS2P07478 247 aa10.03□□□□□ -0.8
CCDC61-208ENST00000601763 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
CCDC61-208ENST00000601763 GAGE2EQ4V326 116 aa10.03□□□□□ -0.8
CCDC61-208ENST00000601763 C6orf226Q5I0X4 101 aa10.03□□□□□ -0.8
CCDC61-208ENST00000601763 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
CCDC61-208ENST00000601763 GAGE2DQ9UEU5 116 aa10.03□□□□□ -0.8
CCDC61-208ENST00000601763 PKHD1L1Q86WI1 4243 aa10.02□□□□□ -0.81
CCDC61-208ENST00000601763 TLX1NBP0CAT3 122 aa10.02□□□□□ -0.81
CCDC61-208ENST00000601763 LINC00474Q9P2X8 69 aa10.02□□□□□ -0.81
CCDC61-208ENST00000601763 ATP5LO75964 103 aa10.01□□□□□ -0.81
CCDC61-208ENST00000601763 COX7B2Q8TF08 81 aa10.01□□□□□ -0.81
CCDC61-208ENST00000601763 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
CCDC61-208ENST00000601763 HSBP1O75506 76 aa10□□□□□ -0.81
CCDC61-208ENST00000601763 CKS1BP61024 79 aa10□□□□□ -0.81
CCDC61-208ENST00000601763 C9orf129Q5T035 196 aaKnown RBP10□□□□□ -0.81
CCDC61-208ENST00000601763 PHF5AQ7RTV0 110 aaKnown RBP10□□□□□ -0.81
CCDC61-208ENST00000601763 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
CCDC61-208ENST00000601763 IFI27L1Q96BM0 104 aa10□□□□□ -0.81
CCDC61-208ENST00000601763 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
CCDC61-208ENST00000601763 IGLV5-39A0A0G2JS06 123 aa9.98□□□□□ -0.81
CCDC61-208ENST00000601763 NDUFC2-KCTD14E9PQ53 114 aa9.98□□□□□ -0.81
CCDC61-208ENST00000601763 C7orf33Q8WU49 177 aa9.98□□□□□ -0.81
CCDC61-208ENST00000601763 CHTOPQ9Y3Y2 248 aaKnown RBP9.98□□□□□ -0.81
CCDC61-208ENST00000601763 LRP1Q07954 4544 aaKnown RBP9.98□□□□□ -0.81
CCDC61-208ENST00000601763 F8VRH5 84 aa9.97□□□□□ -0.81
CCDC61-208ENST00000601763 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
CCDC61-208ENST00000601763 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
CCDC61-208ENST00000601763 HIST1H2BKO60814 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BJP06899 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BOP23527 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BBP33778 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BDP58876 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BCP62807 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST2H2BEQ16778 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BHQ93079 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BNQ99877 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 HIST1H2BMQ99879 126 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
CCDC61-208ENST00000601763 H0Y8G0 127 aa9.95□□□□□ -0.82
CCDC61-208ENST00000601763 FABP4P15090 132 aa9.95□□□□□ -0.82
CCDC61-208ENST00000601763 TMEM170BQ5T4T1 132 aa9.95□□□□□ -0.82
CCDC61-208ENST00000601763 TRAV12-1A0A0B4J245 112 aa9.94□□□□□ -0.82
CCDC61-208ENST00000601763 H3BRM9 83 aa9.94□□□□□ -0.82
CCDC61-208ENST00000601763 SERTAD4-AS1Q5TG53 156 aa9.94□□□□□ -0.82
CCDC61-208ENST00000601763 ODF1Q14990 250 aa9.93□□□□□ -0.82
CCDC61-208ENST00000601763 DMBT1Q9UGM3 2413 aaPredicted RBP9.93□□□□□ -0.82
CCDC61-208ENST00000601763 LEPROTL1O95214 131 aa9.92□□□□□ -0.82
CCDC61-208ENST00000601763 CXCL5P42830 114 aa9.92□□□□□ -0.82
CCDC61-208ENST00000601763 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
CCDC61-208ENST00000601763 TMEM223A0PJW6 202 aa9.91□□□□□ -0.82
CCDC61-208ENST00000601763 ZNF625Q96I27 306 aaPredicted RBP9.91□□□□□ -0.82
CCDC61-208ENST00000601763 PMCHL2Q9BQD1 86 aa9.91□□□□□ -0.82
CCDC61-208ENST00000601763 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
CCDC61-208ENST00000601763 KRTAP29-1A8MX34 341 aaPredicted RBP9.9□□□□□ -0.82
CCDC61-208ENST00000601763 M0QXV9 152 aa9.89□□□□□ -0.83
CCDC61-208ENST00000601763 PFN2P35080 140 aa9.88□□□□□ -0.83
CCDC61-208ENST00000601763 HERC1Q15751 4861 aa9.88□□□□□ -0.83
CCDC61-208ENST00000601763 ATP6V1G1O75348 118 aa9.87□□□□□ -0.83
CCDC61-208ENST00000601763 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC61-208ENST00000601763 J3QL48 77 aa9.85□□□□□ -0.83
CCDC61-208ENST00000601763 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
CCDC61-208ENST00000601763 Q8NDZ9 215 aa9.85□□□□□ -0.83
CCDC61-208ENST00000601763 HSPB8Q9UJY1 196 aa9.85□□□□□ -0.83
CCDC61-208ENST00000601763 C22orf24Q9Y442 160 aa9.85□□□□□ -0.83
CCDC61-208ENST00000601763 MT1HL1P0DM35 61 aa9.84□□□□□ -0.83
CCDC61-208ENST00000601763 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
CCDC61-208ENST00000601763 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
CCDC61-208ENST00000601763 A0A0U1RRA0 63 aa9.83□□□□□ -0.84
CCDC61-208ENST00000601763 OXTP01178 125 aa9.82□□□□□ -0.84
CCDC61-208ENST00000601763 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
CCDC61-208ENST00000601763 UBE2BP63146 152 aa9.81□□□□□ -0.84
CCDC61-208ENST00000601763 GAGE10A6NGK3 116 aa9.8□□□□□ -0.84
CCDC61-208ENST00000601763 DPM2O94777 84 aa9.8□□□□□ -0.84
CCDC61-208ENST00000601763 COA6Q5JTJ3 125 aaKnown RBP9.8□□□□□ -0.84
CCDC61-208ENST00000601763 MAP1LC3CQ9BXW4 147 aa9.8□□□□□ -0.84
CCDC61-208ENST00000601763 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 SYS1-DBNDD2H3BUS1 97 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 IGKCP01834 107 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 IGLV7-43P04211 117 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 S100A1P23297 94 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 LINC00167Q96N53 147 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 PLA2G2DQ9UNK4 145 aa9.79□□□□□ -0.84
CCDC61-208ENST00000601763 SMIM13P0DJ93 91 aa9.78□□□□□ -0.84
CCDC61-208ENST00000601763 PLNP26678 52 aa9.78□□□□□ -0.84
CCDC61-208ENST00000601763 MRPL55Q7Z7F7 128 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms