RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 UNQ6190/PRO20217Q6UXQ8 127 aa13.3□□□□□ -0.28
PNKP-215ENST00000600910 Q6ZRU5 148 aa13.3□□□□□ -0.28
PNKP-215ENST00000600910 IGKV2D-26A0A0A0MRZ7 120 aa13.29□□□□□ -0.28
PNKP-215ENST00000600910 HSBP1L1C9JCN9 74 aa13.29□□□□□ -0.28
PNKP-215ENST00000600910 F8WDY8 70 aa13.29□□□□□ -0.28
PNKP-215ENST00000600910 J3QQQ9 107 aa13.29□□□□□ -0.28
PNKP-215ENST00000600910 CXCL5P42830 114 aa13.29□□□□□ -0.28
PNKP-215ENST00000600910 C10orf25Q5T742 122 aa13.29□□□□□ -0.28
PNKP-215ENST00000600910 A0A1B0GVY2 172 aa13.28□□□□□ -0.28
PNKP-215ENST00000600910 CARD19Q96LW7 228 aa13.28□□□□□ -0.28
PNKP-215ENST00000600910 HECTD4Q9Y4D8 3996 aa13.28□□□□□ -0.28
PNKP-215ENST00000600910 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.28□□□□□ -0.28
PNKP-215ENST00000600910 IGLV5-52A0A0A0MRZ9 124 aa13.27□□□□□ -0.29
PNKP-215ENST00000600910 LGALS3P17931 250 aaKnown RBP13.27□□□□□ -0.29
PNKP-215ENST00000600910 CDPF1Q6NVV7 123 aa13.26□□□□□ -0.29
PNKP-215ENST00000600910 PGPEP1Q9NXJ5 209 aa13.26□□□□□ -0.29
PNKP-215ENST00000600910 NMUP48645 174 aa13.25□□□□□ -0.29
PNKP-215ENST00000600910 ZNF625Q96I27 306 aaPredicted RBP13.25□□□□□ -0.29
PNKP-215ENST00000600910 C6orf48Q9UBA6 75 aa13.25□□□□□ -0.29
PNKP-215ENST00000600910 NDUFA12Q9UI09 145 aa13.25□□□□□ -0.29
PNKP-215ENST00000600910 C9orf163Q8N9P6 203 aa13.24□□□□□ -0.29
PNKP-215ENST00000600910 VAMP8Q9BV40 100 aa13.24□□□□□ -0.29
PNKP-215ENST00000600910 TRBV30A0A0K0K1B3 111 aa13.23□□□□□ -0.29
PNKP-215ENST00000600910 LINC01620Q4KN68 170 aa13.23□□□□□ -0.29
PNKP-215ENST00000600910 SFTA2Q6UW10 78 aa13.23□□□□□ -0.29
PNKP-215ENST00000600910 TTTY13Q9BZ97 58 aa13.23□□□□□ -0.29
PNKP-215ENST00000600910 PAM16Q9Y3D7 125 aa13.23□□□□□ -0.29
PNKP-215ENST00000600910 C9orf116Q5BN46 136 aaPredicted RBP13.22□□□□□ -0.29
PNKP-215ENST00000600910 DNAH5Q8TE73 4624 aa13.21□□□□□ -0.29
PNKP-215ENST00000600910 MYMXA0A1B0GTQ4 84 aa13.21□□□□□ -0.29
PNKP-215ENST00000600910 RNF151Q2KHN1 245 aa13.21□□□□□ -0.3
PNKP-215ENST00000600910 SPATA45Q537H7 98 aa13.2□□□□□ -0.3
PNKP-215ENST00000600910 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
PNKP-215ENST00000600910 ZNF815PA8K554 130 aa13.19□□□□□ -0.3
PNKP-215ENST00000600910 HERV-K104P63124 156 aa13.19□□□□□ -0.3
PNKP-215ENST00000600910 PKHD1P08F94 4074 aa13.19□□□□□ -0.3
PNKP-215ENST00000600910 SMIM6P0DI80 62 aa13.17□□□□□ -0.3
PNKP-215ENST00000600910 GCSHP23434 173 aa13.17□□□□□ -0.3
PNKP-215ENST00000600910 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
PNKP-215ENST00000600910 PFN2P35080 140 aa13.15□□□□□ -0.3
PNKP-215ENST00000600910 MEIG1Q5JSS6 88 aa13.15□□□□□ -0.3
PNKP-215ENST00000600910 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.3
PNKP-215ENST00000600910 LOC107984640A0A0U1RRK4 108 aa13.14□□□□□ -0.31
PNKP-215ENST00000600910 S100A12P80511 92 aa13.14□□□□□ -0.31
PNKP-215ENST00000600910 A0A0J9YXY3 114 aa13.13□□□□□ -0.31
PNKP-215ENST00000600910 NDUFC2-KCTD14E9PQ53 114 aa13.13□□□□□ -0.31
PNKP-215ENST00000600910 TLX1NBP0CAT3 122 aa13.13□□□□□ -0.31
PNKP-215ENST00000600910 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
PNKP-215ENST00000600910 A0A0U1RRA0 63 aa13.13□□□□□ -0.31
PNKP-215ENST00000600910 C16orf90A8MZG2 172 aa13.13□□□□□ -0.31
PNKP-215ENST00000600910 COX17Q14061 63 aa13.13□□□□□ -0.31
PNKP-215ENST00000600910 Q6ZRP5 223 aa13.13□□□□□ -0.31
PNKP-215ENST00000600910 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
PNKP-215ENST00000600910 COX8AP10176 69 aa13.12□□□□□ -0.31
PNKP-215ENST00000600910 C14orf144Q96I85 54 aa13.12□□□□□ -0.31
PNKP-215ENST00000600910 LINC00158P58513 81 aa13.11□□□□□ -0.31
PNKP-215ENST00000600910 KRTAP10-1P60331 282 aa13.11□□□□□ -0.31
PNKP-215ENST00000600910 TP73-AS1Q9UF72 201 aa13.11□□□□□ -0.31
PNKP-215ENST00000600910 PKIGQ9Y2B9 76 aa13.11□□□□□ -0.31
PNKP-215ENST00000600910 A0A096LNI7 61 aa13.1□□□□□ -0.31
PNKP-215ENST00000600910 LINC00587B1AMM8 73 aa13.1□□□□□ -0.31
PNKP-215ENST00000600910 GAGE2BQ13066 116 aa13.1□□□□□ -0.31
PNKP-215ENST00000600910 SCGB1D4Q6XE38 83 aa13.1□□□□□ -0.31
PNKP-215ENST00000600910 GAGE2EQ4V326 116 aa13.1□□□□□ -0.31
PNKP-215ENST00000600910 BOD1L2Q8IYS8 172 aa13.1□□□□□ -0.31
PNKP-215ENST00000600910 GAGE2DQ9UEU5 116 aa13.1□□□□□ -0.31
PNKP-215ENST00000600910 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
PNKP-215ENST00000600910 CHTF8P0CG12 524 aa13.08□□□□□ -0.32
PNKP-215ENST00000600910 PTTG1IPP53801 180 aa13.08□□□□□ -0.32
PNKP-215ENST00000600910 CIRBPQ14011 172 aaKnown RBP13.07□□□□□ -0.32
PNKP-215ENST00000600910 C12orf57Q99622 126 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 PANO1I0J062 215 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 DLEU1O43261 78 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 SLC25A34Q6PIV7 304 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 MIR7-3HGQ8N6C7 128 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 DAND5Q8N907 189 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 LITAFQ99732 161 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 XAGE1AQ9HD64 81 aa13.06□□□□□ -0.32
PNKP-215ENST00000600910 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.06□□□□□ -0.32
PNKP-215ENST00000600910 DYNC1H1Q14204 4646 aaKnown RBP13.05□□□□□ -0.32
PNKP-215ENST00000600910 TIMM17BO60830 172 aa13.05□□□□□ -0.32
PNKP-215ENST00000600910 ADAMTSL4-AS1Q5T5F5 129 aa13.05□□□□□ -0.32
PNKP-215ENST00000600910 LRP1BQ9NZR2 4599 aa13.05□□□□□ -0.32
PNKP-215ENST00000600910 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
PNKP-215ENST00000600910 SND1-IT1Q9HBX3 110 aa13.04□□□□□ -0.32
PNKP-215ENST00000600910 C9orf129Q5T035 196 aaKnown RBP13.03□□□□□ -0.32
PNKP-215ENST00000600910 FAM30AQ9NZY2 134 aa13.03□□□□□ -0.32
PNKP-215ENST00000600910 LINC00474Q9P2X8 69 aa13.03□□□□□ -0.32
PNKP-215ENST00000600910 SPACA4Q8TDM5 124 aa13.02□□□□□ -0.32
PNKP-215ENST00000600910 TMEM238C9JI98 176 aa13.02□□□□□ -0.33
PNKP-215ENST00000600910 Q6ZSA8 131 aa13.02□□□□□ -0.33
PNKP-215ENST00000600910 LINC00518Q8N0U6 118 aa13.01□□□□□ -0.33
PNKP-215ENST00000600910 DPH3Q96FX2 82 aa13□□□□□ -0.33
PNKP-215ENST00000600910 DNAH8Q96JB1 4490 aa13□□□□□ -0.33
PNKP-215ENST00000600910 NPC2P61916 151 aa12.99□□□□□ -0.33
PNKP-215ENST00000600910 PRO1933Q9H354 126 aa12.99□□□□□ -0.33
PNKP-215ENST00000600910 SPANXDQ9BXN6 97 aa12.98□□□□□ -0.33
PNKP-215ENST00000600910 SPANXCQ9NY87 97 aa12.98□□□□□ -0.33
PNKP-215ENST00000600910 UQCR10Q9UDW1 63 aa12.98□□□□□ -0.33
PNKP-215ENST00000600910 FAM168BA1KXE4 195 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms