RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 TIRAPP58753 221 aa8.11□□□□□ -1.11
ARHGEF1-220ENST00000600274 DNAL4O96015 105 aa8.1□□□□□ -1.11
ARHGEF1-220ENST00000600274 DAD1P61803 113 aa8.1□□□□□ -1.11
ARHGEF1-220ENST00000600274 C9orf66Q5T8R8 295 aa8.1□□□□□ -1.11
ARHGEF1-220ENST00000600274 LINC00308Q8TCZ7 52 aa8.1□□□□□ -1.11
ARHGEF1-220ENST00000600274 NDUFA1O15239 70 aa8.1□□□□□ -1.11
ARHGEF1-220ENST00000600274 PKD1L1Q8TDX9 2849 aa8.09□□□□□ -1.11
ARHGEF1-220ENST00000600274 BAALC-AS2P0C853 105 aa8.09□□□□□ -1.11
ARHGEF1-220ENST00000600274 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
ARHGEF1-220ENST00000600274 BAHCC1Q9P281 2608 aa8.09□□□□□ -1.11
ARHGEF1-220ENST00000600274 OXLD1Q5BKU9 147 aa8.09□□□□□ -1.12
ARHGEF1-220ENST00000600274 MIR7-3HGQ8N6C7 128 aa8.09□□□□□ -1.12
ARHGEF1-220ENST00000600274 IGHV4-28A0A0C4DH34 117 aa8.08□□□□□ -1.12
ARHGEF1-220ENST00000600274 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
ARHGEF1-220ENST00000600274 OVOL2Q9BRP0 275 aa8.08□□□□□ -1.12
ARHGEF1-220ENST00000600274 X6R8D5 127 aa8.08□□□□□ -1.12
ARHGEF1-220ENST00000600274 TRBV30A0A0K0K1B3 111 aa8.08□□□□□ -1.12
ARHGEF1-220ENST00000600274 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
ARHGEF1-220ENST00000600274 COX7B2Q8TF08 81 aa8.08□□□□□ -1.12
ARHGEF1-220ENST00000600274 ATP5G1P05496 136 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 SBSPONQ8IVN8 264 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 IGKV3D-7A0A0C4DH55 119 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 PRO0255Q9UI72 69 aa8.07□□□□□ -1.12
ARHGEF1-220ENST00000600274 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
ARHGEF1-220ENST00000600274 RETNQ9HD89 108 aa8.06□□□□□ -1.12
ARHGEF1-220ENST00000600274 IGLV5-45A0A087WSX0 123 aa8.05□□□□□ -1.12
ARHGEF1-220ENST00000600274 IGLV5-39A0A0G2JS06 123 aa8.05□□□□□ -1.12
ARHGEF1-220ENST00000600274 MGAM2Q2M2H8 2515 aa8.05□□□□□ -1.12
ARHGEF1-220ENST00000600274 CRPP02741 224 aa8.04□□□□□ -1.12
ARHGEF1-220ENST00000600274 C5orf47Q569G3 176 aa8.04□□□□□ -1.12
ARHGEF1-220ENST00000600274 APOC4P55056 127 aa8.04□□□□□ -1.12
ARHGEF1-220ENST00000600274 CSDC2Q9Y534 153 aaKnown RBP8.04□□□□□ -1.12
ARHGEF1-220ENST00000600274 LINC00959A0A1B0GUT2 108 aa8.04□□□□□ -1.12
ARHGEF1-220ENST00000600274 H3BT86 120 aa8.04□□□□□ -1.12
ARHGEF1-220ENST00000600274 LST1O00453 97 aa8.04□□□□□ -1.12
ARHGEF1-220ENST00000600274 SLPIP03973 132 aa8.03□□□□□ -1.12
ARHGEF1-220ENST00000600274 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
ARHGEF1-220ENST00000600274 MALP21145 153 aa8.03□□□□□ -1.12
ARHGEF1-220ENST00000600274 HIST1H4AP62805 103 aaKnown RBP8.03□□□□□ -1.12
ARHGEF1-220ENST00000600274 SS18Q15532 418 aa8.03□□□□□ -1.12
ARHGEF1-220ENST00000600274 hADV29S1A0JD25 119 aa8.03□□□□□ -1.12
ARHGEF1-220ENST00000600274 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
ARHGEF1-220ENST00000600274 TENM3Q9P273 2699 aa8.02□□□□□ -1.13
ARHGEF1-220ENST00000600274 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
ARHGEF1-220ENST00000600274 C14orf132Q9NPU4 83 aa8.01□□□□□ -1.13
ARHGEF1-220ENST00000600274 KIR2DL5BQ8NHK3 375 aa8.01□□□□□ -1.13
ARHGEF1-220ENST00000600274 IGHV3OR16-9A0A0B4J2B5 98 aa8.01□□□□□ -1.13
ARHGEF1-220ENST00000600274 PRB2P02812 416 aaPredicted RBP8.01□□□□□ -1.13
ARHGEF1-220ENST00000600274 DSCR8Q96T75 97 aa8.01□□□□□ -1.13
ARHGEF1-220ENST00000600274 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
ARHGEF1-220ENST00000600274 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
ARHGEF1-220ENST00000600274 HRCT1Q6UXD1 115 aa8□□□□□ -1.13
ARHGEF1-220ENST00000600274 KLK12Q9UKR0 248 aa8□□□□□ -1.13
ARHGEF1-220ENST00000600274 FAM19A5Q7Z5A7 132 aaPredicted RBP8□□□□□ -1.13
ARHGEF1-220ENST00000600274 TIMM17BO60830 172 aa7.99□□□□□ -1.13
ARHGEF1-220ENST00000600274 COX7A2LO14548 114 aa7.99□□□□□ -1.13
ARHGEF1-220ENST00000600274 SPART-AS1P0CW21 52 aa7.99□□□□□ -1.13
ARHGEF1-220ENST00000600274 LECT2O14960 151 aa7.98□□□□□ -1.13
ARHGEF1-220ENST00000600274 LYRM9A8MSI8 78 aa7.98□□□□□ -1.13
ARHGEF1-220ENST00000600274 CCL18P55774 89 aa7.98□□□□□ -1.13
ARHGEF1-220ENST00000600274 REG3AQ06141 175 aa7.98□□□□□ -1.13
ARHGEF1-220ENST00000600274 COPS9Q8WXC6 57 aa7.98□□□□□ -1.13
ARHGEF1-220ENST00000600274 CHCHD10Q8WYQ3 142 aaPredicted RBP7.98□□□□□ -1.13
ARHGEF1-220ENST00000600274 SMIM9A6NGZ8 99 aa7.97□□□□□ -1.13
ARHGEF1-220ENST00000600274 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
ARHGEF1-220ENST00000600274 PKIGQ9Y2B9 76 aa7.97□□□□□ -1.13
ARHGEF1-220ENST00000600274 A0A087WZ39 114 aa7.97□□□□□ -1.13
ARHGEF1-220ENST00000600274 A0A087WVE0 104 aa7.96□□□□□ -1.13
ARHGEF1-220ENST00000600274 NCR3O14931 201 aa7.96□□□□□ -1.13
ARHGEF1-220ENST00000600274 FAM218AQ96MZ4 157 aa7.96□□□□□ -1.13
ARHGEF1-220ENST00000600274 C6orf223Q8N319 242 aa7.95□□□□□ -1.14
ARHGEF1-220ENST00000600274 C1orf43Q9BWL3 253 aa7.95□□□□□ -1.14
ARHGEF1-220ENST00000600274 Q8NAQ8 132 aa7.95□□□□□ -1.14
ARHGEF1-220ENST00000600274 WFDC9Q8NEX5 89 aa7.94□□□□□ -1.14
ARHGEF1-220ENST00000600274 MRAPQ8TCY5 172 aa7.94□□□□□ -1.14
ARHGEF1-220ENST00000600274 A0A1B0GX51 115 aa7.94□□□□□ -1.14
ARHGEF1-220ENST00000600274 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
ARHGEF1-220ENST00000600274 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
ARHGEF1-220ENST00000600274 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 IGKV2-28A0A075B6P5 120 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 IGKV2D-28P01615 120 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 MIFP14174 115 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 A0A0U1RQV1 116 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 INAFM2P0DMQ5 153 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 LINC00643Q86TS7 51 aa7.93□□□□□ -1.14
ARHGEF1-220ENST00000600274 A0A087WYN8 130 aa7.92□□□□□ -1.14
ARHGEF1-220ENST00000600274 FAM19A3Q7Z5A8 133 aa7.92□□□□□ -1.14
ARHGEF1-220ENST00000600274 LINC00612Q8N6U2 182 aa7.92□□□□□ -1.14
ARHGEF1-220ENST00000600274 Q6ZTC4 211 aa7.91□□□□□ -1.14
ARHGEF1-220ENST00000600274 IBA57-AS1B1ANH7 110 aa7.91□□□□□ -1.14
ARHGEF1-220ENST00000600274 KRTAP24-1Q3LI83 254 aa7.91□□□□□ -1.14
ARHGEF1-220ENST00000600274 HIGD2BQ4VC39 106 aa7.91□□□□□ -1.14
ARHGEF1-220ENST00000600274 SPAG11BQ08648 103 aa7.91□□□□□ -1.14
ARHGEF1-220ENST00000600274 UNQ6190/PRO20217Q6UXQ8 127 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms