RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
SMARCA4-216ENST00000591545 SMIM26A0A096LP01 95 aa9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 RPL28P46779 137 aaKnown RBP9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 TRAV7A0A075B6U4 112 aa9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 TANC2Q9HCD6 1990 aa9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 NTM-AS1Q6ZSK4 140 aa9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 Q8N9L7 120 aa9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
SMARCA4-216ENST00000591545 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
SMARCA4-216ENST00000591545 LAMA3Q16787 3333 aa9.6□□□□□ -0.87
SMARCA4-216ENST00000591545 IGKV2-28A0A075B6P5 120 aa9.6□□□□□ -0.87
SMARCA4-216ENST00000591545 IGKV2D-28P01615 120 aa9.6□□□□□ -0.87
SMARCA4-216ENST00000591545 PRM2P04554 102 aa9.6□□□□□ -0.87
SMARCA4-216ENST00000591545 RAI1Q7Z5J4 1906 aaPredicted RBP9.59□□□□□ -0.87
SMARCA4-216ENST00000591545 EDN2P20800 178 aa9.58□□□□□ -0.88
SMARCA4-216ENST00000591545 Q6ZTC4 211 aa9.58□□□□□ -0.88
SMARCA4-216ENST00000591545 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
SMARCA4-216ENST00000591545 SMIM1B2RUZ4 78 aa9.58□□□□□ -0.88
SMARCA4-216ENST00000591545 EGFEM1PQ0D2K5 195 aa9.58□□□□□ -0.88
SMARCA4-216ENST00000591545 CSDC2Q9Y534 153 aaKnown RBP9.57□□□□□ -0.88
SMARCA4-216ENST00000591545 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
SMARCA4-216ENST00000591545 A0A0U1RQV1 116 aa9.57□□□□□ -0.88
SMARCA4-216ENST00000591545 SERP1Q9Y6X1 66 aa9.57□□□□□ -0.88
SMARCA4-216ENST00000591545 LINC00526Q96FQ7 95 aa9.57□□□□□ -0.88
SMARCA4-216ENST00000591545 LAMA2P24043 3122 aaKnown RBP9.57□□□□□ -0.88
SMARCA4-216ENST00000591545 A6NED7 52 aa9.56□□□□□ -0.88
SMARCA4-216ENST00000591545 M0QXV9 152 aa9.56□□□□□ -0.88
SMARCA4-216ENST00000591545 CYSRT1A8MQ03 144 aa9.55□□□□□ -0.88
SMARCA4-216ENST00000591545 Q8N814 137 aa9.55□□□□□ -0.88
SMARCA4-216ENST00000591545 AMELXQ99217 191 aa9.55□□□□□ -0.88
SMARCA4-216ENST00000591545 EPG5Q9HCE0 2579 aa9.55□□□□□ -0.88
SMARCA4-216ENST00000591545 F8WDY8 70 aa9.54□□□□□ -0.88
SMARCA4-216ENST00000591545 Q8N2B8 174 aa9.54□□□□□ -0.88
SMARCA4-216ENST00000591545 C1orf134Q5TEV5 83 aa9.53□□□□□ -0.88
SMARCA4-216ENST00000591545 TRANK1O15050 2925 aa9.52□□□□□ -0.88
SMARCA4-216ENST00000591545 MTORP42345 2549 aa9.52□□□□□ -0.89
SMARCA4-216ENST00000591545 IGLV5-52A0A0A0MRZ9 124 aa9.52□□□□□ -0.89
SMARCA4-216ENST00000591545 PPDPFQ9H3Y8 114 aa9.52□□□□□ -0.89
SMARCA4-216ENST00000591545 LINC00694P0DN24 101 aa9.51□□□□□ -0.89
SMARCA4-216ENST00000591545 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
SMARCA4-216ENST00000591545 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
SMARCA4-216ENST00000591545 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
SMARCA4-216ENST00000591545 PCSK5Q92824 1860 aa9.51□□□□□ -0.89
SMARCA4-216ENST00000591545 POLQO75417 2590 aa9.5□□□□□ -0.89
SMARCA4-216ENST00000591545 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
SMARCA4-216ENST00000591545 C1orf195Q5TG92 126 aa9.5□□□□□ -0.89
SMARCA4-216ENST00000591545 PKD1L2Q7Z442 2459 aa9.5□□□□□ -0.89
SMARCA4-216ENST00000591545 FSHBP01225 129 aa9.5□□□□□ -0.89
SMARCA4-216ENST00000591545 FAM30AQ9NZY2 134 aa9.5□□□□□ -0.89
SMARCA4-216ENST00000591545 A0A096LNJ9 63 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 KRTAP24-1Q3LI83 254 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 FHL2Q14192 279 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 BEAN1Q3B7T3 259 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 FHL3Q13643 280 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 SPINK6Q6UWN8 80 aa9.49□□□□□ -0.89
SMARCA4-216ENST00000591545 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
SMARCA4-216ENST00000591545 PRYO14603 147 aa9.47□□□□□ -0.89
SMARCA4-216ENST00000591545 PRR4Q16378 134 aa9.47□□□□□ -0.89
SMARCA4-216ENST00000591545 COX6A2Q02221 97 aa9.46□□□□□ -0.89
SMARCA4-216ENST00000591545 UNC80Q8N2C7 3258 aa9.46□□□□□ -0.9
SMARCA4-216ENST00000591545 A0A087WYN8 130 aa9.46□□□□□ -0.9
SMARCA4-216ENST00000591545 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.9
SMARCA4-216ENST00000591545 A0A1B0GUV1 79 aa9.45□□□□□ -0.9
SMARCA4-216ENST00000591545 REG3GQ6UW15 175 aa9.44□□□□□ -0.9
SMARCA4-216ENST00000591545 CELA1Q9UNI1 258 aa9.44□□□□□ -0.9
SMARCA4-216ENST00000591545 CDH23Q9H251 3354 aa9.44□□□□□ -0.9
SMARCA4-216ENST00000591545 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
SMARCA4-216ENST00000591545 IGLV4-60A0A075B6I1 120 aa9.43□□□□□ -0.9
SMARCA4-216ENST00000591545 IGLV9-49A0A0B4J1Y8 123 aa9.43□□□□□ -0.9
SMARCA4-216ENST00000591545 LINC00208Q96KT6 92 aa9.43□□□□□ -0.9
SMARCA4-216ENST00000591545 A0A087WVE0 104 aa9.43□□□□□ -0.9
SMARCA4-216ENST00000591545 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
SMARCA4-216ENST00000591545 Q8N3U1 123 aa9.42□□□□□ -0.9
SMARCA4-216ENST00000591545 HRCT1Q6UXD1 115 aa9.42□□□□□ -0.9
SMARCA4-216ENST00000591545 F8P00451 2351 aa9.42□□□□□ -0.9
SMARCA4-216ENST00000591545 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
SMARCA4-216ENST00000591545 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
SMARCA4-216ENST00000591545 ACANP16112 2415 aa9.41□□□□□ -0.9
SMARCA4-216ENST00000591545 TRBV7-7A0A0K0K1E9 115 aa9.4□□□□□ -0.9
SMARCA4-216ENST00000591545 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
SMARCA4-216ENST00000591545 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.91
SMARCA4-216ENST00000591545 ESRGQ1W209 222 aa9.39□□□□□ -0.91
SMARCA4-216ENST00000591545 LINC00575Q6W349 94 aa9.39□□□□□ -0.91
SMARCA4-216ENST00000591545 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
SMARCA4-216ENST00000591545 PRRC2CQ9Y520 2896 aaKnown RBP9.37□□□□□ -0.91
SMARCA4-216ENST00000591545 CXCL6P80162 114 aa9.37□□□□□ -0.91
SMARCA4-216ENST00000591545 Q6ZVQ6 151 aa9.37□□□□□ -0.91
SMARCA4-216ENST00000591545 MDFIQ99750 246 aa9.36□□□□□ -0.91
SMARCA4-216ENST00000591545 ANKRD17O75179 2603 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-216ENST00000591545 TET2Q6N021 2002 aaPredicted RBP9.36□□□□□ -0.91
SMARCA4-216ENST00000591545 TMEM254Q8TBM7 123 aa9.36□□□□□ -0.91
SMARCA4-216ENST00000591545 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
SMARCA4-216ENST00000591545 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-216ENST00000591545 LINC01547P58512 204 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-216ENST00000591545 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
SMARCA4-216ENST00000591545 BCE1O60756 84 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms