RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 SPINK8P0C7L1 97 aa13.37□□□□□ -0.27
CIRBP-229ENST00000590704 RNF151Q2KHN1 245 aa13.37□□□□□ -0.27
CIRBP-229ENST00000590704 Q8IZM0 81 aa13.37□□□□□ -0.27
CIRBP-229ENST00000590704 SPACA4Q8TDM5 124 aa13.37□□□□□ -0.27
CIRBP-229ENST00000590704 SMR3BP02814 79 aaPredicted RBP13.36□□□□□ -0.27
CIRBP-229ENST00000590704 PCLOQ9Y6V0 5065 aa13.35□□□□□ -0.27
CIRBP-229ENST00000590704 F8VRH5 84 aa13.35□□□□□ -0.27
CIRBP-229ENST00000590704 Q8N1X5 172 aa13.35□□□□□ -0.27
CIRBP-229ENST00000590704 NDUFA1O15239 70 aa13.34□□□□□ -0.27
CIRBP-229ENST00000590704 TOMM7Q9P0U1 55 aa13.34□□□□□ -0.27
CIRBP-229ENST00000590704 A0A087WYN8 130 aa13.32□□□□□ -0.28
CIRBP-229ENST00000590704 EPM2AB3EWF7 344 aa13.32□□□□□ -0.28
CIRBP-229ENST00000590704 C9orf116Q5BN46 136 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-229ENST00000590704 PACRGQ96M98 296 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-229ENST00000590704 HSPB8Q9UJY1 196 aa13.32□□□□□ -0.28
CIRBP-229ENST00000590704 TLX1NBP0CAT3 122 aa13.31□□□□□ -0.28
CIRBP-229ENST00000590704 C6orf226Q5I0X4 101 aa13.31□□□□□ -0.28
CIRBP-229ENST00000590704 PTTG1IPP53801 180 aa13.3□□□□□ -0.28
CIRBP-229ENST00000590704 Q6ZRP5 223 aa13.3□□□□□ -0.28
CIRBP-229ENST00000590704 COX7B2Q8TF08 81 aa13.3□□□□□ -0.28
CIRBP-229ENST00000590704 IGKV2-24A0A0C4DH68 120 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 LOC107984640A0A0U1RRK4 108 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 TMEM223A0PJW6 202 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 PLAC8Q9NZF1 115 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 TRBV30A0A0K0K1B3 111 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 H0Y8G0 127 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 H3BRM9 83 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 TMEM170BQ5T4T1 132 aa13.29□□□□□ -0.28
CIRBP-229ENST00000590704 ABCA13Q86UQ4 5058 aa13.28□□□□□ -0.28
CIRBP-229ENST00000590704 PRSS2P07478 247 aa13.28□□□□□ -0.28
CIRBP-229ENST00000590704 KRTAP10-4P60372 401 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-229ENST00000590704 PMCHL2Q9BQD1 86 aa13.28□□□□□ -0.28
CIRBP-229ENST00000590704 MAJINQ3KP22 176 aa13.27□□□□□ -0.29
CIRBP-229ENST00000590704 A0A1W2PNN7 141 aa13.26□□□□□ -0.29
CIRBP-229ENST00000590704 GAGE2BQ13066 116 aa13.26□□□□□ -0.29
CIRBP-229ENST00000590704 KRTAP7-1Q8IUC3 87 aa13.26□□□□□ -0.29
CIRBP-229ENST00000590704 SYS1-DBNDD2H3BUS1 97 aa13.25□□□□□ -0.29
CIRBP-229ENST00000590704 CKS1BP61024 79 aa13.24□□□□□ -0.29
CIRBP-229ENST00000590704 MAP1LC3CQ9BXW4 147 aa13.24□□□□□ -0.29
CIRBP-229ENST00000590704 C3orf79P0CE67 100 aa13.23□□□□□ -0.29
CIRBP-229ENST00000590704 CXCL5P42830 114 aa13.23□□□□□ -0.29
CIRBP-229ENST00000590704 STPG4Q8N801 248 aa13.23□□□□□ -0.29
CIRBP-229ENST00000590704 ZNF625Q96I27 306 aaPredicted RBP13.23□□□□□ -0.29
CIRBP-229ENST00000590704 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
CIRBP-229ENST00000590704 RPL18AQ02543 176 aaKnown RBP13.22□□□□□ -0.29
CIRBP-229ENST00000590704 C9orf129Q5T035 196 aaKnown RBP13.22□□□□□ -0.29
CIRBP-229ENST00000590704 Q5VSD8 79 aa13.22□□□□□ -0.29
CIRBP-229ENST00000590704 LINC01545Q5VT33 79 aa13.22□□□□□ -0.29
CIRBP-229ENST00000590704 LINC00528Q8N1L1 170 aa13.22□□□□□ -0.29
CIRBP-229ENST00000590704 HIST3H2BBQ8N257 126 aa13.22□□□□□ -0.29
CIRBP-229ENST00000590704 SRRM2Q9UQ35 2752 aaKnown RBP13.2□□□□□ -0.3
CIRBP-229ENST00000590704 DPM2O94777 84 aa13.2□□□□□ -0.3
CIRBP-229ENST00000590704 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
CIRBP-229ENST00000590704 FAM168BA1KXE4 195 aa13.19□□□□□ -0.3
CIRBP-229ENST00000590704 DPH3Q96FX2 82 aa13.19□□□□□ -0.3
CIRBP-229ENST00000590704 PKIGQ9Y2B9 76 aa13.19□□□□□ -0.3
CIRBP-229ENST00000590704 IGKCP01834 107 aa13.18□□□□□ -0.3
CIRBP-229ENST00000590704 PLNP26678 52 aa13.18□□□□□ -0.3
CIRBP-229ENST00000590704 TSPEAR-AS2P59090 65 aa13.18□□□□□ -0.3
CIRBP-229ENST00000590704 GAGE2EQ4V326 116 aa13.18□□□□□ -0.3
CIRBP-229ENST00000590704 PET117Q6UWS5 81 aa13.18□□□□□ -0.3
CIRBP-229ENST00000590704 GAGE2DQ9UEU5 116 aa13.18□□□□□ -0.3
CIRBP-229ENST00000590704 HIST1H2BLQ99880 126 aa13.16□□□□□ -0.3
CIRBP-229ENST00000590704 PKHD1L1Q86WI1 4243 aa13.14□□□□□ -0.31
CIRBP-229ENST00000590704 C5orf52A6NGY3 159 aa13.14□□□□□ -0.31
CIRBP-229ENST00000590704 FAM229AH3BQW9 127 aa13.13□□□□□ -0.31
CIRBP-229ENST00000590704 SNRPEP62304 92 aaKnown RBP13.13□□□□□ -0.31
CIRBP-229ENST00000590704 XAGE1AQ9HD64 81 aa13.13□□□□□ -0.31
CIRBP-229ENST00000590704 LEPROTO15243 131 aa13.12□□□□□ -0.31
CIRBP-229ENST00000590704 KRTDAPP60985 99 aa13.12□□□□□ -0.31
CIRBP-229ENST00000590704 KRTAP11-1Q8IUC1 163 aa13.12□□□□□ -0.31
CIRBP-229ENST00000590704 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
CIRBP-229ENST00000590704 PHF5AQ7RTV0 110 aaKnown RBP13.1□□□□□ -0.31
CIRBP-229ENST00000590704 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
CIRBP-229ENST00000590704 HNRNPA3P51991 378 aaKnown RBP13.09□□□□□ -0.31
CIRBP-229ENST00000590704 FLG2Q5D862 2391 aaPredicted RBP13.09□□□□□ -0.31
CIRBP-229ENST00000590704 E9PLD3 99 aa13.08□□□□□ -0.32
CIRBP-229ENST00000590704 PFN2P35080 140 aa13.08□□□□□ -0.32
CIRBP-229ENST00000590704 NDUFA12Q9UI09 145 aa13.08□□□□□ -0.32
CIRBP-229ENST00000590704 J3QQQ9 107 aa13.07□□□□□ -0.32
CIRBP-229ENST00000590704 IGKV2D-26A0A0A0MRZ7 120 aa13.06□□□□□ -0.32
CIRBP-229ENST00000590704 S100A6P06703 90 aa13.06□□□□□ -0.32
CIRBP-229ENST00000590704 COX17Q14061 63 aa13.06□□□□□ -0.32
CIRBP-229ENST00000590704 Q8NDZ9 215 aa13.06□□□□□ -0.32
CIRBP-229ENST00000590704 PLEKHB2Q96CS7 222 aa13.06□□□□□ -0.32
CIRBP-229ENST00000590704 MYCBP2O75592 4640 aa13.05□□□□□ -0.32
CIRBP-229ENST00000590704 RPL37AP61513 92 aaKnown RBP13.05□□□□□ -0.32
CIRBP-229ENST00000590704 SFTA2Q6UW10 78 aa13.05□□□□□ -0.32
CIRBP-229ENST00000590704 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-229ENST00000590704 PLA2G1BP04054 148 aaKnown RBP13.04□□□□□ -0.32
CIRBP-229ENST00000590704 SND1-IT1Q9HBX3 110 aa13.04□□□□□ -0.32
CIRBP-229ENST00000590704 PLA2G2DQ9UNK4 145 aa13.04□□□□□ -0.32
CIRBP-229ENST00000590704 SMIM13P0DJ93 91 aa13.03□□□□□ -0.32
CIRBP-229ENST00000590704 S100A2P29034 98 aa13.03□□□□□ -0.32
CIRBP-229ENST00000590704 HERVK_113P61574 105 aa13.03□□□□□ -0.32
CIRBP-229ENST00000590704 LRP1Q07954 4544 aaKnown RBP13.02□□□□□ -0.33
CIRBP-229ENST00000590704 HERV-K104P63124 156 aa13.02□□□□□ -0.33
CIRBP-229ENST00000590704 ATOH7Q8N100 152 aa13.02□□□□□ -0.33
CIRBP-229ENST00000590704 C22orf24Q9Y442 160 aa13.02□□□□□ -0.33
CIRBP-229ENST00000590704 A0A0U1RRA0 63 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms