RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 C2orf82Q6UX34 121 aa12.94□□□□□ -0.34
TCF3-213ENST00000590436 Q6ZRU5 148 aa12.94□□□□□ -0.34
TCF3-213ENST00000590436 FUSP35637 526 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCF3-213ENST00000590436 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
TCF3-213ENST00000590436 UNQ6190/PRO20217Q6UXQ8 127 aa12.93□□□□□ -0.34
TCF3-213ENST00000590436 C9orf163Q8N9P6 203 aa12.92□□□□□ -0.34
TCF3-213ENST00000590436 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
TCF3-213ENST00000590436 HSBP1L1C9JCN9 74 aa12.91□□□□□ -0.34
TCF3-213ENST00000590436 J3QQQ9 107 aa12.91□□□□□ -0.34
TCF3-213ENST00000590436 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
TCF3-213ENST00000590436 C10orf25Q5T742 122 aa12.91□□□□□ -0.34
TCF3-213ENST00000590436 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
TCF3-213ENST00000590436 PKIGQ9Y2B9 76 aa12.9□□□□□ -0.34
TCF3-213ENST00000590436 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
TCF3-213ENST00000590436 LCE2DQ5TA82 110 aaPredicted RBP12.89□□□□□ -0.35
TCF3-213ENST00000590436 C6orf48Q9UBA6 75 aa12.89□□□□□ -0.35
TCF3-213ENST00000590436 GCSHP23434 173 aa12.88□□□□□ -0.35
TCF3-213ENST00000590436 NMUP48645 174 aa12.88□□□□□ -0.35
TCF3-213ENST00000590436 ZNF625Q96I27 306 aaPredicted RBP12.88□□□□□ -0.35
TCF3-213ENST00000590436 NDUFA12Q9UI09 145 aa12.88□□□□□ -0.35
TCF3-213ENST00000590436 MYMXA0A1B0GTQ4 84 aa12.87□□□□□ -0.35
TCF3-213ENST00000590436 C16orf90A8MZG2 172 aa12.87□□□□□ -0.35
TCF3-213ENST00000590436 ANKRD39Q53RE8 183 aa12.87□□□□□ -0.35
TCF3-213ENST00000590436 MAJINQ3KP22 176 aa12.86□□□□□ -0.35
TCF3-213ENST00000590436 LINC01620Q4KN68 170 aa12.86□□□□□ -0.35
TCF3-213ENST00000590436 PYY3Q5JQD4 70 aa12.86□□□□□ -0.35
TCF3-213ENST00000590436 PKD1P98161 4303 aa12.85□□□□□ -0.35
TCF3-213ENST00000590436 IGKV2D-26A0A0A0MRZ7 120 aa12.85□□□□□ -0.35
TCF3-213ENST00000590436 HERV-K104P63124 156 aa12.85□□□□□ -0.35
TCF3-213ENST00000590436 LOC107984640A0A0U1RRK4 108 aa12.84□□□□□ -0.35
TCF3-213ENST00000590436 DNAH11Q96DT5 4516 aa12.84□□□□□ -0.35
TCF3-213ENST00000590436 C9orf116Q5BN46 136 aaPredicted RBP12.83□□□□□ -0.36
TCF3-213ENST00000590436 SDIM1Q6ZPB5 146 aa12.83□□□□□ -0.36
TCF3-213ENST00000590436 VAMP8Q9BV40 100 aa12.82□□□□□ -0.36
TCF3-213ENST00000590436 HECTD4Q9Y4D8 3996 aa12.81□□□□□ -0.36
TCF3-213ENST00000590436 NDUFC2-KCTD14E9PQ53 114 aa12.81□□□□□ -0.36
TCF3-213ENST00000590436 TLX1NBP0CAT3 122 aa12.81□□□□□ -0.36
TCF3-213ENST00000590436 ERG28Q9UKR5 140 aa12.81□□□□□ -0.36
TCF3-213ENST00000590436 ZNF815PA8K554 130 aa12.8□□□□□ -0.36
TCF3-213ENST00000590436 KRTAP10-1P60331 282 aa12.8□□□□□ -0.36
TCF3-213ENST00000590436 RPL18AQ02543 176 aaKnown RBP12.8□□□□□ -0.36
TCF3-213ENST00000590436 LOC105371267A0A1B0GV96 52 aa12.79□□□□□ -0.36
TCF3-213ENST00000590436 LINC00587B1AMM8 73 aa12.79□□□□□ -0.36
TCF3-213ENST00000590436 COX17Q14061 63 aa12.79□□□□□ -0.36
TCF3-213ENST00000590436 MEIG1Q5JSS6 88 aa12.79□□□□□ -0.36
TCF3-213ENST00000590436 PFN2P35080 140 aa12.78□□□□□ -0.36
TCF3-213ENST00000590436 PAM16Q9Y3D7 125 aa12.78□□□□□ -0.36
TCF3-213ENST00000590436 A0A096LNI7 61 aa12.77□□□□□ -0.37
TCF3-213ENST00000590436 GAGE2BQ13066 116 aa12.77□□□□□ -0.37
TCF3-213ENST00000590436 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
TCF3-213ENST00000590436 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.37
TCF3-213ENST00000590436 PTTG1IPP53801 180 aa12.76□□□□□ -0.37
TCF3-213ENST00000590436 Q6ZRP5 223 aa12.76□□□□□ -0.37
TCF3-213ENST00000590436 PCP2Q8IVA1 136 aa12.76□□□□□ -0.37
TCF3-213ENST00000590436 LINC00474Q9P2X8 69 aa12.76□□□□□ -0.37
TCF3-213ENST00000590436 IGKV2-24A0A0C4DH68 120 aa12.75□□□□□ -0.37
TCF3-213ENST00000590436 A0A0J9YXY3 114 aa12.75□□□□□ -0.37
TCF3-213ENST00000590436 LINC00158P58513 81 aa12.75□□□□□ -0.37
TCF3-213ENST00000590436 GAGE2EQ4V326 116 aa12.75□□□□□ -0.37
TCF3-213ENST00000590436 GAGE2DQ9UEU5 116 aa12.75□□□□□ -0.37
TCF3-213ENST00000590436 SMIM6P0DI80 62 aa12.74□□□□□ -0.37
TCF3-213ENST00000590436 SMIM13P0DJ93 91 aa12.74□□□□□ -0.37
TCF3-213ENST00000590436 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
TCF3-213ENST00000590436 CHTF8P0CG12 524 aa12.73□□□□□ -0.37
TCF3-213ENST00000590436 S100A12P80511 92 aa12.73□□□□□ -0.37
TCF3-213ENST00000590436 PKHD1P08F94 4074 aa12.72□□□□□ -0.37
TCF3-213ENST00000590436 A0A0U1RRA0 63 aa12.72□□□□□ -0.37
TCF3-213ENST00000590436 SCGB1D4Q6XE38 83 aa12.72□□□□□ -0.37
TCF3-213ENST00000590436 Q6ZSA8 131 aa12.72□□□□□ -0.37
TCF3-213ENST00000590436 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.72□□□□□ -0.37
TCF3-213ENST00000590436 DNAH5Q8TE73 4624 aa12.72□□□□□ -0.37
TCF3-213ENST00000590436 COX8AP10176 69 aa12.71□□□□□ -0.37
TCF3-213ENST00000590436 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
TCF3-213ENST00000590436 TIMM17BO60830 172 aa12.7□□□□□ -0.38
TCF3-213ENST00000590436 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
TCF3-213ENST00000590436 FAM30AQ9NZY2 134 aa12.7□□□□□ -0.38
TCF3-213ENST00000590436 PANO1I0J062 215 aa12.69□□□□□ -0.38
TCF3-213ENST00000590436 BOD1L2Q8IYS8 172 aa12.69□□□□□ -0.38
TCF3-213ENST00000590436 MIR7-3HGQ8N6C7 128 aa12.69□□□□□ -0.38
TCF3-213ENST00000590436 SND1-IT1Q9HBX3 110 aa12.69□□□□□ -0.38
TCF3-213ENST00000590436 XAGE1AQ9HD64 81 aa12.69□□□□□ -0.38
TCF3-213ENST00000590436 TMEM238C9JI98 176 aa12.67□□□□□ -0.38
TCF3-213ENST00000590436 DLEU1O43261 78 aa12.67□□□□□ -0.38
TCF3-213ENST00000590436 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
TCF3-213ENST00000590436 C14orf144Q96I85 54 aa12.67□□□□□ -0.38
TCF3-213ENST00000590436 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
TCF3-213ENST00000590436 DAND5Q8N907 189 aa12.65□□□□□ -0.38
TCF3-213ENST00000590436 LITAFQ99732 161 aa12.65□□□□□ -0.38
TCF3-213ENST00000590436 A0A087WYN8 130 aa12.64□□□□□ -0.39
TCF3-213ENST00000590436 ADAMTSL4-AS1Q5T5F5 129 aa12.64□□□□□ -0.39
TCF3-213ENST00000590436 SCXQ7RTU7 201 aa12.63□□□□□ -0.39
TCF3-213ENST00000590436 MIEN1Q9BRT3 115 aa12.63□□□□□ -0.39
TCF3-213ENST00000590436 DYNC1H1Q14204 4646 aaKnown RBP12.62□□□□□ -0.39
TCF3-213ENST00000590436 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
TCF3-213ENST00000590436 TP73-AS1Q9UF72 201 aa12.62□□□□□ -0.39
TCF3-213ENST00000590436 CIRBP-AS1Q8TBR5 109 aa12.61□□□□□ -0.39
TCF3-213ENST00000590436 SPANXDQ9BXN6 97 aa12.61□□□□□ -0.39
TCF3-213ENST00000590436 SPANXCQ9NY87 97 aa12.61□□□□□ -0.39
TCF3-213ENST00000590436 A0A1W2PNN7 141 aa12.6□□□□□ -0.39
TCF3-213ENST00000590436 FAM168BA1KXE4 195 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms