RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 LEPROTO15243 131 aa11.85□□□□□ -0.51
H3F3B-206ENST00000587560 SCGB1D1O95968 90 aa11.85□□□□□ -0.51
H3F3B-206ENST00000587560 TSPEAR-AS2P59090 65 aa11.85□□□□□ -0.51
H3F3B-206ENST00000587560 HERVK_113P61574 105 aa11.84□□□□□ -0.51
H3F3B-206ENST00000587560 IGKV2D-26A0A0A0MRZ7 120 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 CXCL5P42830 114 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 MAJINQ3KP22 176 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 C10orf25Q5T742 122 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 Q6ZRU5 148 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 ZNF625Q96I27 306 aaPredicted RBP11.83□□□□□ -0.52
H3F3B-206ENST00000587560 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
H3F3B-206ENST00000587560 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
H3F3B-206ENST00000587560 SYCNQ0VAF6 134 aa11.82□□□□□ -0.52
H3F3B-206ENST00000587560 PLEKHB2Q96CS7 222 aa11.82□□□□□ -0.52
H3F3B-206ENST00000587560 PRSS2P07478 247 aa11.81□□□□□ -0.52
H3F3B-206ENST00000587560 RNF151Q2KHN1 245 aa11.81□□□□□ -0.52
H3F3B-206ENST00000587560 C6orf226Q5I0X4 101 aa11.81□□□□□ -0.52
H3F3B-206ENST00000587560 UNQ6190/PRO20217Q6UXQ8 127 aa11.81□□□□□ -0.52
H3F3B-206ENST00000587560 C9orf163Q8N9P6 203 aa11.81□□□□□ -0.52
H3F3B-206ENST00000587560 CAMK2N2Q96S95 79 aa11.81□□□□□ -0.52
H3F3B-206ENST00000587560 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
H3F3B-206ENST00000587560 J3QQQ9 107 aa11.8□□□□□ -0.52
H3F3B-206ENST00000587560 NDUFA1O15239 70 aa11.8□□□□□ -0.52
H3F3B-206ENST00000587560 CDPF1Q6NVV7 123 aa11.8□□□□□ -0.52
H3F3B-206ENST00000587560 C6orf48Q9UBA6 75 aa11.8□□□□□ -0.52
H3F3B-206ENST00000587560 FUSP35637 526 aaKnown RBP eCLIP11.79□□□□□ -0.52
H3F3B-206ENST00000587560 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
H3F3B-206ENST00000587560 DMBT1Q9UGM3 2413 aaPredicted RBP11.78□□□□□ -0.52
H3F3B-206ENST00000587560 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
H3F3B-206ENST00000587560 CKS1BP61024 79 aa11.77□□□□□ -0.53
H3F3B-206ENST00000587560 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
H3F3B-206ENST00000587560 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.53
H3F3B-206ENST00000587560 IGLV5-52A0A0A0MRZ9 124 aa11.76□□□□□ -0.53
H3F3B-206ENST00000587560 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
H3F3B-206ENST00000587560 NMUP48645 174 aa11.75□□□□□ -0.53
H3F3B-206ENST00000587560 SDIM1Q6ZPB5 146 aa11.75□□□□□ -0.53
H3F3B-206ENST00000587560 TLX1NBP0CAT3 122 aa11.74□□□□□ -0.53
H3F3B-206ENST00000587560 LGALS3P17931 250 aaKnown RBP11.74□□□□□ -0.53
H3F3B-206ENST00000587560 HSBP1L1C9JCN9 74 aa11.73□□□□□ -0.53
H3F3B-206ENST00000587560 HERV-K104P63124 156 aa11.73□□□□□ -0.53
H3F3B-206ENST00000587560 C9orf116Q5BN46 136 aaPredicted RBP11.73□□□□□ -0.53
H3F3B-206ENST00000587560 TTTY13Q9BZ97 58 aa11.73□□□□□ -0.53
H3F3B-206ENST00000587560 MYMXA0A1B0GTQ4 84 aa11.72□□□□□ -0.53
H3F3B-206ENST00000587560 LINC01620Q4KN68 170 aa11.72□□□□□ -0.53
H3F3B-206ENST00000587560 PCP2Q8IVA1 136 aa11.72□□□□□ -0.53
H3F3B-206ENST00000587560 DNAH5Q8TE73 4624 aa11.72□□□□□ -0.53
H3F3B-206ENST00000587560 VAMP8Q9BV40 100 aa11.71□□□□□ -0.53
H3F3B-206ENST00000587560 SMIM6P0DI80 62 aa11.7□□□□□ -0.54
H3F3B-206ENST00000587560 GCSHP23434 173 aa11.7□□□□□ -0.54
H3F3B-206ENST00000587560 KRTAP10-1P60331 282 aa11.7□□□□□ -0.54
H3F3B-206ENST00000587560 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
H3F3B-206ENST00000587560 ERG28Q9UKR5 140 aa11.69□□□□□ -0.54
H3F3B-206ENST00000587560 PAM16Q9Y3D7 125 aa11.69□□□□□ -0.54
H3F3B-206ENST00000587560 A0A0J9YXY3 114 aa11.68□□□□□ -0.54
H3F3B-206ENST00000587560 LOC107984640A0A0U1RRK4 108 aa11.68□□□□□ -0.54
H3F3B-206ENST00000587560 ZNF815PA8K554 130 aa11.68□□□□□ -0.54
H3F3B-206ENST00000587560 CIRBPQ14011 172 aaKnown RBP11.68□□□□□ -0.54
H3F3B-206ENST00000587560 COX17Q14061 63 aa11.68□□□□□ -0.54
H3F3B-206ENST00000587560 SPATA45Q537H7 98 aa11.68□□□□□ -0.54
H3F3B-206ENST00000587560 COX8AP10176 69 aa11.67□□□□□ -0.54
H3F3B-206ENST00000587560 Q6ZRP5 223 aa11.67□□□□□ -0.54
H3F3B-206ENST00000587560 Q6ZSA8 131 aa11.67□□□□□ -0.54
H3F3B-206ENST00000587560 BOD1L2Q8IYS8 172 aa11.67□□□□□ -0.54
H3F3B-206ENST00000587560 C16orf90A8MZG2 172 aa11.66□□□□□ -0.54
H3F3B-206ENST00000587560 DLEU1O43261 78 aa11.66□□□□□ -0.54
H3F3B-206ENST00000587560 LITAFQ99732 161 aa11.66□□□□□ -0.54
H3F3B-206ENST00000587560 A0A096LNI7 61 aa11.65□□□□□ -0.54
H3F3B-206ENST00000587560 PANO1I0J062 215 aa11.65□□□□□ -0.54
H3F3B-206ENST00000587560 PTTG1IPP53801 180 aa11.65□□□□□ -0.54
H3F3B-206ENST00000587560 PKIGQ9Y2B9 76 aa11.65□□□□□ -0.54
H3F3B-206ENST00000587560 TIMM17BO60830 172 aa11.64□□□□□ -0.55
H3F3B-206ENST00000587560 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
H3F3B-206ENST00000587560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-206ENST00000587560 LINC00587B1AMM8 73 aa11.63□□□□□ -0.55
H3F3B-206ENST00000587560 FAM30AQ9NZY2 134 aa11.63□□□□□ -0.55
H3F3B-206ENST00000587560 TP73-AS1Q9UF72 201 aa11.63□□□□□ -0.55
H3F3B-206ENST00000587560 EPM2AB3EWF7 344 aa11.62□□□□□ -0.55
H3F3B-206ENST00000587560 PFN2P35080 140 aa11.62□□□□□ -0.55
H3F3B-206ENST00000587560 SPACA4Q8TDM5 124 aa11.62□□□□□ -0.55
H3F3B-206ENST00000587560 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
H3F3B-206ENST00000587560 RPL18AQ02543 176 aaKnown RBP11.61□□□□□ -0.55
H3F3B-206ENST00000587560 C9orf129Q5T035 196 aaKnown RBP11.61□□□□□ -0.55
H3F3B-206ENST00000587560 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
H3F3B-206ENST00000587560 C14orf144Q96I85 54 aa11.61□□□□□ -0.55
H3F3B-206ENST00000587560 LOC107984156A0A0G2JMH3 177 aa11.6□□□□□ -0.55
H3F3B-206ENST00000587560 MEIG1Q5JSS6 88 aa11.6□□□□□ -0.55
H3F3B-206ENST00000587560 ARL17AQ8IVW1 177 aa11.6□□□□□ -0.55
H3F3B-206ENST00000587560 LRP1BQ9NZR2 4599 aa11.6□□□□□ -0.55
H3F3B-206ENST00000587560 DNAH8Q96JB1 4490 aa11.6□□□□□ -0.55
H3F3B-206ENST00000587560 LINC00158P58513 81 aa11.59□□□□□ -0.55
H3F3B-206ENST00000587560 S100A12P80511 92 aa11.59□□□□□ -0.55
H3F3B-206ENST00000587560 GAGE2BQ13066 116 aa11.59□□□□□ -0.55
H3F3B-206ENST00000587560 KRTAP7-1Q8IUC3 87 aa11.59□□□□□ -0.55
H3F3B-206ENST00000587560 MIR7-3HGQ8N6C7 128 aa11.59□□□□□ -0.55
H3F3B-206ENST00000587560 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
H3F3B-206ENST00000587560 GAGE2EQ4V326 116 aa11.58□□□□□ -0.56
H3F3B-206ENST00000587560 LINC00474Q9P2X8 69 aa11.58□□□□□ -0.56
H3F3B-206ENST00000587560 GAGE2DQ9UEU5 116 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms