RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ZFYVE26Q68DK2 2539 aa11.37□□□□□ -0.59
RANBP3-209ENST00000587411 IGSF10Q6WRI0 2623 aa11.37□□□□□ -0.59
RANBP3-209ENST00000587411 MAP1AP78559 2803 aaPredicted RBP11.37□□□□□ -0.59
RANBP3-209ENST00000587411 TRAV23DV6A0A075B6W5 121 aa11.37□□□□□ -0.59
RANBP3-209ENST00000587411 FAM19A1Q7Z5A9 133 aa11.36□□□□□ -0.59
RANBP3-209ENST00000587411 BCE1O60756 84 aa11.36□□□□□ -0.59
RANBP3-209ENST00000587411 OXTP01178 125 aa11.35□□□□□ -0.59
RANBP3-209ENST00000587411 PRR3P79522 188 aaKnown RBP11.35□□□□□ -0.59
RANBP3-209ENST00000587411 WFDC9Q8NEX5 89 aa11.35□□□□□ -0.59
RANBP3-209ENST00000587411 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
RANBP3-209ENST00000587411 C19orf73Q9NVV2 129 aa11.35□□□□□ -0.59
RANBP3-209ENST00000587411 PLA2G2AP14555 144 aa11.34□□□□□ -0.59
RANBP3-209ENST00000587411 WIPF1O43516 503 aa11.33□□□□□ -0.6
RANBP3-209ENST00000587411 GYPEP15421 78 aa11.33□□□□□ -0.6
RANBP3-209ENST00000587411 KIAA0087Q14695 138 aa11.33□□□□□ -0.6
RANBP3-209ENST00000587411 LOC110117498A0A087WWA1 95 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 IGHV4-28A0A0C4DH34 117 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 LINC00575Q6W349 94 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 FLNCQ14315 2725 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 C2CD3Q4AC94 2353 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 ZNF561-AS1K7EIQ3 104 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 IGLV1-51P01701 117 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 RBM3P98179 157 aaKnown RBP11.32□□□□□ -0.6
RANBP3-209ENST00000587411 CD164L2Q6UWJ8 174 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 Q6ZQT0 140 aa11.32□□□□□ -0.6
RANBP3-209ENST00000587411 LINC00612Q8N6U2 182 aa11.31□□□□□ -0.6
RANBP3-209ENST00000587411 CR1P17927 2039 aa11.31□□□□□ -0.6
RANBP3-209ENST00000587411 USP9YO00507 2555 aaPredicted RBP11.31□□□□□ -0.6
RANBP3-209ENST00000587411 MYO18BQ8IUG5 2567 aa11.31□□□□□ -0.6
RANBP3-209ENST00000587411 DNAJC9-AS1A6NH13 148 aa11.31□□□□□ -0.6
RANBP3-209ENST00000587411 DEFB130BP0DP73 79 aa11.31□□□□□ -0.6
RANBP3-209ENST00000587411 DEFB130AP0DP74 79 aa11.31□□□□□ -0.6
RANBP3-209ENST00000587411 CLPSL2Q6UWE3 100 aa11.3□□□□□ -0.6
RANBP3-209ENST00000587411 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
RANBP3-209ENST00000587411 RNASE1P07998 156 aaKnown RBP11.3□□□□□ -0.6
RANBP3-209ENST00000587411 C20orf197Q8N268 126 aa11.3□□□□□ -0.6
RANBP3-209ENST00000587411 TRAV7A0A075B6U4 112 aa11.29□□□□□ -0.6
RANBP3-209ENST00000587411 DEFB113Q30KQ7 82 aa11.29□□□□□ -0.6
RANBP3-209ENST00000587411 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
RANBP3-209ENST00000587411 MUC7Q8TAX7 377 aa11.29□□□□□ -0.6
RANBP3-209ENST00000587411 Q5XG85 94 aa11.28□□□□□ -0.6
RANBP3-209ENST00000587411 USP9XQ93008 2570 aaPredicted RBP11.28□□□□□ -0.6
RANBP3-209ENST00000587411 H3BQ85 93 aa11.28□□□□□ -0.6
RANBP3-209ENST00000587411 PRB1P04280 392 aa11.28□□□□□ -0.6
RANBP3-209ENST00000587411 USP24Q9UPU5 2620 aa11.27□□□□□ -0.6
RANBP3-209ENST00000587411 ZANQ9Y493 2812 aa11.27□□□□□ -0.6
RANBP3-209ENST00000587411 FAM236DA0A1B0GTK5 79 aa11.27□□□□□ -0.6
RANBP3-209ENST00000587411 FAM236CP0DP71 79 aa11.27□□□□□ -0.6
RANBP3-209ENST00000587411 PDE6GP18545 87 aa11.27□□□□□ -0.61
RANBP3-209ENST00000587411 PRO0255Q9UI72 69 aa11.27□□□□□ -0.61
RANBP3-209ENST00000587411 ANKRD17O75179 2603 aaKnown RBP11.27□□□□□ -0.61
RANBP3-209ENST00000587411 UTP20O75691 2785 aaKnown RBP11.27□□□□□ -0.61
RANBP3-209ENST00000587411 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
RANBP3-209ENST00000587411 LAMTOR3Q9UHA4 124 aa11.26□□□□□ -0.61
RANBP3-209ENST00000587411 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
RANBP3-209ENST00000587411 LINC00269Q8N2A0 174 aa11.25□□□□□ -0.61
RANBP3-209ENST00000587411 C4orf26Q17RF5 130 aa11.25□□□□□ -0.61
RANBP3-209ENST00000587411 LINC00482Q8N8I6 264 aa11.25□□□□□ -0.61
RANBP3-209ENST00000587411 MYO9AB2RTY4 2548 aa11.25□□□□□ -0.61
RANBP3-209ENST00000587411 CSMD2Q7Z408 3487 aa11.24□□□□□ -0.61
RANBP3-209ENST00000587411 LINC01547P58512 204 aaPredicted RBP11.24□□□□□ -0.61
RANBP3-209ENST00000587411 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
RANBP3-209ENST00000587411 Q8NDZ9 215 aa11.24□□□□□ -0.61
RANBP3-209ENST00000587411 FAM208BQ5VWN6 2430 aa11.24□□□□□ -0.61
RANBP3-209ENST00000587411 ZNF462Q96JM2 2506 aa11.23□□□□□ -0.61
RANBP3-209ENST00000587411 CXCL6P80162 114 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 C9orf66Q5T8R8 295 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 Q6ZVQ6 151 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 SERP1Q9Y6X1 66 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 H7BZZ5 65 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 BBC3Q96PG8 261 aaPredicted RBP11.22□□□□□ -0.61
RANBP3-209ENST00000587411 CHD6Q8TD26 2715 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 EPM2AB3EWF7 344 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 REG3AQ06141 175 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 KLKP1Q107X0 134 aa11.22□□□□□ -0.61
RANBP3-209ENST00000587411 EPG5Q9HCE0 2579 aa11.21□□□□□ -0.61
RANBP3-209ENST00000587411 HRCT1Q6UXD1 115 aa11.21□□□□□ -0.61
RANBP3-209ENST00000587411 ESM1Q9NQ30 184 aa11.21□□□□□ -0.61
RANBP3-209ENST00000587411 IGLV6-57P01721 117 aa11.21□□□□□ -0.62
RANBP3-209ENST00000587411 HAMPP81172 84 aa11.21□□□□□ -0.62
RANBP3-209ENST00000587411 A0A096LPF7 62 aa11.2□□□□□ -0.62
RANBP3-209ENST00000587411 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
RANBP3-209ENST00000587411 IGLV10-54A0A075B6I4 117 aa11.19□□□□□ -0.62
RANBP3-209ENST00000587411 LINC01006Q8NI28 216 aa11.19□□□□□ -0.62
RANBP3-209ENST00000587411 C16orf95Q9H693 158 aa11.19□□□□□ -0.62
RANBP3-209ENST00000587411 CENPEQ02224 2701 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 FBN2P35556 2912 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 A0A0J9YWU9 116 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 M0R2N4 97 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 Q6ZQY7 126 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 LRRK2Q5S007 2527 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 WNK1Q9H4A3 2382 aa11.18□□□□□ -0.62
RANBP3-209ENST00000587411 SPAG11BQ08648 103 aa11.17□□□□□ -0.62
RANBP3-209ENST00000587411 X6R8D5 127 aa11.17□□□□□ -0.62
RANBP3-209ENST00000587411 KRTAP1-3Q8IUG1 177 aa11.16□□□□□ -0.62
RANBP3-209ENST00000587411 UNQ6190/PRO20217Q6UXQ8 127 aa11.16□□□□□ -0.62
RANBP3-209ENST00000587411 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms