RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.8
RANBP3-209ENST00000587411 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
RANBP3-209ENST00000587411 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
RANBP3-209ENST00000587411 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
RANBP3-209ENST00000587411 HRCP23327 699 aa27.55■■■□□ 2
RANBP3-209ENST00000587411 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
RANBP3-209ENST00000587411 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
RANBP3-209ENST00000587411 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
RANBP3-209ENST00000587411 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
RANBP3-209ENST00000587411 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
RANBP3-209ENST00000587411 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
RANBP3-209ENST00000587411 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
RANBP3-209ENST00000587411 TRIM26Q12899 539 aaPredicted RBP26.5■■□□□ 1.83
RANBP3-209ENST00000587411 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
RANBP3-209ENST00000587411 ZEB1P37275 1124 aaPredicted RBP26.28■■□□□ 1.8
RANBP3-209ENST00000587411 ABCC9O60706 1549 aa26.2■■□□□ 1.78
RANBP3-209ENST00000587411 PELP1Q8IZL8 1130 aaKnown RBP26.11■■□□□ 1.77
RANBP3-209ENST00000587411 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
RANBP3-209ENST00000587411 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
RANBP3-209ENST00000587411 RB1CC1Q8TDY2 1594 aa25.79■■□□□ 1.72
RANBP3-209ENST00000587411 SCAF1Q9H7N4 1312 aaKnown RBP25.69■■□□□ 1.7
RANBP3-209ENST00000587411 SCRIBQ14160 1630 aa25.69■■□□□ 1.7
RANBP3-209ENST00000587411 FAM9AQ8IZU1 332 aaPredicted RBP25.59■■□□□ 1.69
RANBP3-209ENST00000587411 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
RANBP3-209ENST00000587411 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
RANBP3-209ENST00000587411 MROH2BQ7Z745 1585 aa25.26■■□□□ 1.63
RANBP3-209ENST00000587411 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
RANBP3-209ENST00000587411 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
RANBP3-209ENST00000587411 NACADO15069 1562 aa25.21■■□□□ 1.63
RANBP3-209ENST00000587411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.63
RANBP3-209ENST00000587411 NEUROD1Q13562 356 aa25.15■■□□□ 1.62
RANBP3-209ENST00000587411 CENPBP07199 599 aaPredicted RBP25.14■■□□□ 1.62
RANBP3-209ENST00000587411 WIZO95785 1651 aa25.13■■□□□ 1.61
RANBP3-209ENST00000587411 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
RANBP3-209ENST00000587411 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
RANBP3-209ENST00000587411 WRNQ14191 1432 aaPredicted RBP eCLIP25.11■■□□□ 1.61
RANBP3-209ENST00000587411 DIEXFQ68CQ4 756 aaKnown RBP25.09■■□□□ 1.61
RANBP3-209ENST00000587411 MYT1Q01538 1121 aa25.05■■□□□ 1.6
RANBP3-209ENST00000587411 GTF3C3Q9Y5Q9 886 aa24.99■■□□□ 1.59
RANBP3-209ENST00000587411 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
RANBP3-209ENST00000587411 TNIKQ9UKE5 1360 aa24.86■■□□□ 1.57
RANBP3-209ENST00000587411 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
RANBP3-209ENST00000587411 CCDC88BA6NC98 1476 aa24.81■■□□□ 1.56
RANBP3-209ENST00000587411 EEA1Q15075 1411 aa24.81■■□□□ 1.56
RANBP3-209ENST00000587411 ZNF316A6NFI3 1004 aaPredicted RBP24.79■■□□□ 1.56
RANBP3-209ENST00000587411 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
RANBP3-209ENST00000587411 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
RANBP3-209ENST00000587411 SOGA1O94964 1423 aa24.68■■□□□ 1.54
RANBP3-209ENST00000587411 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
RANBP3-209ENST00000587411 CSRNP3Q8WYN3 585 aa24.64■■□□□ 1.53
RANBP3-209ENST00000587411 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
RANBP3-209ENST00000587411 GOLGA3Q08378 1498 aa24.61■■□□□ 1.53
RANBP3-209ENST00000587411 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
RANBP3-209ENST00000587411 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
RANBP3-209ENST00000587411 YTHDC1Q96MU7 727 aaKnown RBP24.44■■□□□ 1.5
RANBP3-209ENST00000587411 MIER1Q8N108 512 aa24.43■■□□□ 1.5
RANBP3-209ENST00000587411 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
RANBP3-209ENST00000587411 KIF21BO75037 1637 aa24.39■■□□□ 1.5
RANBP3-209ENST00000587411 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
RANBP3-209ENST00000587411 CLIP1P30622 1438 aa24.32■■□□□ 1.48
RANBP3-209ENST00000587411 VPS8Q8N3P4 1428 aa24.32■■□□□ 1.48
RANBP3-209ENST00000587411 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
RANBP3-209ENST00000587411 CLSPNQ9HAW4 1339 aa24.27■■□□□ 1.48
RANBP3-209ENST00000587411 APLP2Q06481 763 aa24.2■■□□□ 1.47
RANBP3-209ENST00000587411 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
RANBP3-209ENST00000587411 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
RANBP3-209ENST00000587411 PEG3Q9GZU2 1588 aa24.18■■□□□ 1.46
RANBP3-209ENST00000587411 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
RANBP3-209ENST00000587411 DHX57Q6P158 1386 aaKnown RBP24.03■■□□□ 1.44
RANBP3-209ENST00000587411 SUPT16HQ9Y5B9 1047 aaKnown RBP23.96■■□□□ 1.43
RANBP3-209ENST00000587411 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
RANBP3-209ENST00000587411 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
RANBP3-209ENST00000587411 TOP2BQ02880 1626 aa23.89■■□□□ 1.41
RANBP3-209ENST00000587411 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
RANBP3-209ENST00000587411 RRBP1Q9P2E9 1410 aaKnown RBP23.85■■□□□ 1.41
RANBP3-209ENST00000587411 CUX2O14529 1486 aa23.85■■□□□ 1.41
RANBP3-209ENST00000587411 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
RANBP3-209ENST00000587411 PRXQ9BXM0 1461 aa23.83■■□□□ 1.4
RANBP3-209ENST00000587411 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
RANBP3-209ENST00000587411 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
RANBP3-209ENST00000587411 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.46e-7■□□□□ 11.3
RANBP3-209ENST00000587411 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
RANBP3-209ENST00000587411 TSHZ2Q9NRE2 1034 aa23.72■■□□□ 1.39
RANBP3-209ENST00000587411 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
RANBP3-209ENST00000587411 ANP32EQ9BTT0 268 aa23.62■■□□□ 1.37
RANBP3-209ENST00000587411 KIF27Q86VH2 1401 aa23.58■■□□□ 1.37
RANBP3-209ENST00000587411 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
RANBP3-209ENST00000587411 MAPKBP1O60336 1514 aa23.54■■□□□ 1.36
RANBP3-209ENST00000587411 RAB3GAP2Q9H2M9 1393 aa23.52■■□□□ 1.36
RANBP3-209ENST00000587411 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
RANBP3-209ENST00000587411 CUX1P39880 1505 aa23.49■■□□□ 1.35
RANBP3-209ENST00000587411 KCNH8Q96L42 1107 aa23.45■■□□□ 1.34
RANBP3-209ENST00000587411 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
RANBP3-209ENST00000587411 ITGAEP38570 1179 aa23.42■■□□□ 1.34
RANBP3-209ENST00000587411 TIAM1Q13009 1591 aa23.42■■□□□ 1.34
RANBP3-209ENST00000587411 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
RANBP3-209ENST00000587411 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
RANBP3-209ENST00000587411 FKBP8Q14318 412 aa23.38■■□□□ 1.33
RANBP3-209ENST00000587411 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
RANBP3-209ENST00000587411 NEFLP07196 543 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms