RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
APOC1-201ENST00000586638 LINC01561Q8N1V8 128 aa6.82□□□□□ -1.32
APOC1-201ENST00000586638 UPK3BQ9BT76 320 aa6.82□□□□□ -1.32
APOC1-201ENST00000586638 Q9HAA7 133 aa6.82□□□□□ -1.32
APOC1-201ENST00000586638 KMT2AQ03164 3969 aa6.82□□□□□ -1.32
APOC1-201ENST00000586638 TRAV8-4A0A0B4J246 113 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 A0A1B0GV90 55 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 K7ERJ3 54 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 NPC2P61916 151 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 Q6ZVH6 145 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 Q8IZM0 81 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 TM2D2Q9BX73 214 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 DNAH10Q8IVF4 4471 aa6.81□□□□□ -1.32
APOC1-201ENST00000586638 IGKV2D-24A0A075B6R9 120 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 A6NDN8 102 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 TIMM17BO60830 172 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 PRSS2P07478 247 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 HERV-K104P63124 156 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 SPAG11BQ08648 103 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 ADAMTSL4-AS1Q5T5F5 129 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 DAND5Q8N907 189 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 SPANXDQ9BXN6 97 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 NHP2Q9NX24 153 aaKnown RBP6.8□□□□□ -1.32
APOC1-201ENST00000586638 SPANXCQ9NY87 97 aa6.8□□□□□ -1.32
APOC1-201ENST00000586638 SMIM13P0DJ93 91 aa6.79□□□□□ -1.32
APOC1-201ENST00000586638 KIAA0087Q14695 138 aa6.79□□□□□ -1.32
APOC1-201ENST00000586638 C2orf82Q6UX34 121 aa6.79□□□□□ -1.32
APOC1-201ENST00000586638 APOMO95445 188 aa6.78□□□□□ -1.32
APOC1-201ENST00000586638 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
APOC1-201ENST00000586638 MUSTN1Q8IVN3 82 aa6.78□□□□□ -1.32
APOC1-201ENST00000586638 RAB37Q96AX2 223 aa6.78□□□□□ -1.32
APOC1-201ENST00000586638 LINC00526Q96FQ7 95 aa6.78□□□□□ -1.32
APOC1-201ENST00000586638 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
APOC1-201ENST00000586638 A6NJY4 79 aa6.77□□□□□ -1.33
APOC1-201ENST00000586638 IBA57-AS1B1ANH7 110 aa6.77□□□□□ -1.33
APOC1-201ENST00000586638 HIGD2BQ4VC39 106 aa6.77□□□□□ -1.33
APOC1-201ENST00000586638 C6orf223Q8N319 242 aa6.77□□□□□ -1.33
APOC1-201ENST00000586638 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
APOC1-201ENST00000586638 NAA38Q9BRA0 125 aaKnown RBP6.77□□□□□ -1.33
APOC1-201ENST00000586638 KRTAP1-5Q9BYS1 174 aa6.77□□□□□ -1.33
APOC1-201ENST00000586638 ABCA13Q86UQ4 5058 aa6.76□□□□□ -1.33
APOC1-201ENST00000586638 A4D1N5 150 aa6.76□□□□□ -1.33
APOC1-201ENST00000586638 EIF4EBP3O60516 100 aaPredicted RBP6.76□□□□□ -1.33
APOC1-201ENST00000586638 CXCL5P42830 114 aa6.76□□□□□ -1.33
APOC1-201ENST00000586638 CKS1BP61024 79 aa6.76□□□□□ -1.33
APOC1-201ENST00000586638 CIRBPQ14011 172 aaKnown RBP6.76□□□□□ -1.33
APOC1-201ENST00000586638 SOSTDC1Q6X4U4 206 aa6.76□□□□□ -1.33
APOC1-201ENST00000586638 ERG28Q9UKR5 140 aa6.76□□□□□ -1.33
APOC1-201ENST00000586638 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
APOC1-201ENST00000586638 PFN2P35080 140 aa6.75□□□□□ -1.33
APOC1-201ENST00000586638 LINC00158P58513 81 aa6.75□□□□□ -1.33
APOC1-201ENST00000586638 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
APOC1-201ENST00000586638 LINC00308Q8TCZ7 52 aa6.75□□□□□ -1.33
APOC1-201ENST00000586638 COX11Q9Y6N1 276 aa6.75□□□□□ -1.33
APOC1-201ENST00000586638 IFITM1P13164 125 aa6.74□□□□□ -1.33
APOC1-201ENST00000586638 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
APOC1-201ENST00000586638 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
APOC1-201ENST00000586638 UNQ6190/PRO20217Q6UXQ8 127 aa6.74□□□□□ -1.33
APOC1-201ENST00000586638 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
APOC1-201ENST00000586638 RMI2Q96E14 147 aa6.74□□□□□ -1.33
APOC1-201ENST00000586638 CFC1BP0CG36 223 aa6.73□□□□□ -1.33
APOC1-201ENST00000586638 CFC1P0CG37 223 aa6.73□□□□□ -1.33
APOC1-201ENST00000586638 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
APOC1-201ENST00000586638 NTN5Q8WTR8 489 aaPredicted RBP6.73□□□□□ -1.33
APOC1-201ENST00000586638 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
APOC1-201ENST00000586638 H3BUT2 72 aa6.72□□□□□ -1.33
APOC1-201ENST00000586638 LINC00336Q6ZUF6 198 aa6.72□□□□□ -1.33
APOC1-201ENST00000586638 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
APOC1-201ENST00000586638 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
APOC1-201ENST00000586638 A0A0B4J2C4 111 aa6.71□□□□□ -1.34
APOC1-201ENST00000586638 USP17L23D6RBM5 183 aa6.71□□□□□ -1.34
APOC1-201ENST00000586638 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.34
APOC1-201ENST00000586638 Q6ZRU5 148 aa6.71□□□□□ -1.34
APOC1-201ENST00000586638 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
APOC1-201ENST00000586638 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.34
APOC1-201ENST00000586638 HERC1Q15751 4861 aa6.71□□□□□ -1.34
APOC1-201ENST00000586638 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
APOC1-201ENST00000586638 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
APOC1-201ENST00000586638 LECT2O14960 151 aa6.7□□□□□ -1.34
APOC1-201ENST00000586638 TSPAN13O95857 204 aa6.7□□□□□ -1.34
APOC1-201ENST00000586638 TTC32Q5I0X7 151 aa6.7□□□□□ -1.34
APOC1-201ENST00000586638 NBDYA0A0U1RRE5 68 aa6.69□□□□□ -1.34
APOC1-201ENST00000586638 WFDC2Q14508 124 aa6.69□□□□□ -1.34
APOC1-201ENST00000586638 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
APOC1-201ENST00000586638 A0A1B0GVY2 172 aa6.68□□□□□ -1.34
APOC1-201ENST00000586638 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
APOC1-201ENST00000586638 H7C2G1 150 aa6.68□□□□□ -1.34
APOC1-201ENST00000586638 RPL13AP40429 203 aaKnown RBP6.68□□□□□ -1.34
APOC1-201ENST00000586638 VAMP3Q15836 100 aa6.68□□□□□ -1.34
APOC1-201ENST00000586638 C2orf48Q96LS8 159 aa6.68□□□□□ -1.34
APOC1-201ENST00000586638 PRO1854Q9UHT4 67 aa6.68□□□□□ -1.34
APOC1-201ENST00000586638 DNAH6Q9C0G6 4158 aa6.67□□□□□ -1.34
APOC1-201ENST00000586638 TRBV30A0A0K0K1B3 111 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms