RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 DNAH10OSP0CZ25 163 aa13.74□□□□□ -0.21
ATG4D-204ENST00000586417 RAB37Q96AX2 223 aa13.74□□□□□ -0.21
ATG4D-204ENST00000586417 TRAV8-4A0A0B4J246 113 aa13.73□□□□□ -0.21
ATG4D-204ENST00000586417 Q8IZM0 81 aa13.73□□□□□ -0.21
ATG4D-204ENST00000586417 C9orf118A6NHY6 69 aa13.72□□□□□ -0.21
ATG4D-204ENST00000586417 KIAA0087Q14695 138 aa13.72□□□□□ -0.21
ATG4D-204ENST00000586417 DNAH1Q9P2D7 4330 aa13.71□□□□□ -0.21
ATG4D-204ENST00000586417 CIRBPQ14011 172 aaKnown RBP13.71□□□□□ -0.21
ATG4D-204ENST00000586417 A4D1N5 150 aa13.71□□□□□ -0.22
ATG4D-204ENST00000586417 KRTAP26-1Q6PEX3 210 aa13.71□□□□□ -0.22
ATG4D-204ENST00000586417 DAND5Q8N907 189 aa13.71□□□□□ -0.22
ATG4D-204ENST00000586417 PRSS2P07478 247 aa13.7□□□□□ -0.22
ATG4D-204ENST00000586417 MALP21145 153 aa13.7□□□□□ -0.22
ATG4D-204ENST00000586417 RPL24P83731 157 aaKnown RBP13.7□□□□□ -0.22
ATG4D-204ENST00000586417 C6orf226Q5I0X4 101 aa13.7□□□□□ -0.22
ATG4D-204ENST00000586417 MEIG1Q5JSS6 88 aa13.7□□□□□ -0.22
ATG4D-204ENST00000586417 EIF4EBP3O60516 100 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-204ENST00000586417 CFC1BP0CG36 223 aa13.69□□□□□ -0.22
ATG4D-204ENST00000586417 CFC1P0CG37 223 aa13.69□□□□□ -0.22
ATG4D-204ENST00000586417 NAA38Q9BRA0 125 aaKnown RBP13.69□□□□□ -0.22
ATG4D-204ENST00000586417 UPK3BQ9BT76 320 aa13.69□□□□□ -0.22
ATG4D-204ENST00000586417 VPS13DQ5THJ4 4388 aa13.68□□□□□ -0.22
ATG4D-204ENST00000586417 A0A0U1RRA0 63 aa13.68□□□□□ -0.22
ATG4D-204ENST00000586417 SFTA2Q6UW10 78 aa13.68□□□□□ -0.22
ATG4D-204ENST00000586417 H3BUT2 72 aa13.68□□□□□ -0.22
ATG4D-204ENST00000586417 IFITM1P13164 125 aa13.68□□□□□ -0.22
ATG4D-204ENST00000586417 APOMO95445 188 aa13.67□□□□□ -0.22
ATG4D-204ENST00000586417 NPC2P61916 151 aa13.67□□□□□ -0.22
ATG4D-204ENST00000586417 UBE2DNLQ8IWF7 75 aa13.67□□□□□ -0.22
ATG4D-204ENST00000586417 C2orf82Q6UX34 121 aa13.66□□□□□ -0.22
ATG4D-204ENST00000586417 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
ATG4D-204ENST00000586417 IBA57-AS1B1ANH7 110 aa13.65□□□□□ -0.22
ATG4D-204ENST00000586417 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
ATG4D-204ENST00000586417 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.63□□□□□ -0.23
ATG4D-204ENST00000586417 A0A0B4J2C4 111 aa13.63□□□□□ -0.23
ATG4D-204ENST00000586417 CXCL5P42830 114 aa13.63□□□□□ -0.23
ATG4D-204ENST00000586417 CKS1BP61024 79 aa13.63□□□□□ -0.23
ATG4D-204ENST00000586417 SPAG11BQ08648 103 aa13.63□□□□□ -0.23
ATG4D-204ENST00000586417 CFAP161Q6P656 301 aa13.63□□□□□ -0.23
ATG4D-204ENST00000586417 A0A1W2PPM0 123 aa13.62□□□□□ -0.23
ATG4D-204ENST00000586417 VAMP3Q15836 100 aa13.62□□□□□ -0.23
ATG4D-204ENST00000586417 ERG28Q9UKR5 140 aa13.62□□□□□ -0.23
ATG4D-204ENST00000586417 MIR7-3HGQ8N6C7 128 aa13.61□□□□□ -0.23
ATG4D-204ENST00000586417 C1orf43Q9BWL3 253 aa13.61□□□□□ -0.23
ATG4D-204ENST00000586417 PGPEP1Q9NXJ5 209 aa13.61□□□□□ -0.23
ATG4D-204ENST00000586417 KMT2AQ03164 3969 aa13.61□□□□□ -0.23
ATG4D-204ENST00000586417 PPDPFQ9H3Y8 114 aa13.6□□□□□ -0.23
ATG4D-204ENST00000586417 ALMS1Q8TCU4 4167 aa13.6□□□□□ -0.23
ATG4D-204ENST00000586417 LINC00158P58513 81 aa13.6□□□□□ -0.23
ATG4D-204ENST00000586417 PRO1854Q9UHT4 67 aa13.6□□□□□ -0.23
ATG4D-204ENST00000586417 TSPAN13O95857 204 aa13.59□□□□□ -0.23
ATG4D-204ENST00000586417 C6orf223Q8N319 242 aa13.59□□□□□ -0.23
ATG4D-204ENST00000586417 LY6G6CO95867 125 aa13.58□□□□□ -0.23
ATG4D-204ENST00000586417 PFN2P35080 140 aa13.58□□□□□ -0.23
ATG4D-204ENST00000586417 COPS9Q8WXC6 57 aa13.58□□□□□ -0.23
ATG4D-204ENST00000586417 LINC00476Q8WZB0 136 aa13.58□□□□□ -0.23
ATG4D-204ENST00000586417 LINC00526Q96FQ7 95 aa13.58□□□□□ -0.23
ATG4D-204ENST00000586417 IGKV2D-24A0A075B6R9 120 aa13.58□□□□□ -0.24
ATG4D-204ENST00000586417 Q9HAA7 133 aa13.58□□□□□ -0.24
ATG4D-204ENST00000586417 UBE2V1Q13404 147 aa13.57□□□□□ -0.24
ATG4D-204ENST00000586417 C10orf25Q5T742 122 aa13.56□□□□□ -0.24
ATG4D-204ENST00000586417 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
ATG4D-204ENST00000586417 FABP2P12104 132 aa13.55□□□□□ -0.24
ATG4D-204ENST00000586417 UNQ6190/PRO20217Q6UXQ8 127 aa13.55□□□□□ -0.24
ATG4D-204ENST00000586417 NTN5Q8WTR8 489 aaPredicted RBP13.55□□□□□ -0.24
ATG4D-204ENST00000586417 KRTAP1-5Q9BYS1 174 aa13.55□□□□□ -0.24
ATG4D-204ENST00000586417 K7EP34 96 aa13.53□□□□□ -0.24
ATG4D-204ENST00000586417 COX17Q14061 63 aa13.53□□□□□ -0.24
ATG4D-204ENST00000586417 C9orf116Q5BN46 136 aaPredicted RBP13.53□□□□□ -0.24
ATG4D-204ENST00000586417 HIGD2BQ4VC39 106 aa13.53□□□□□ -0.24
ATG4D-204ENST00000586417 SPCS1Q9Y6A9 102 aa13.53□□□□□ -0.24
ATG4D-204ENST00000586417 GAGE10A6NGK3 116 aa13.51□□□□□ -0.25
ATG4D-204ENST00000586417 GVQW2A0A096LPI5 108 aaPredicted RBP13.5□□□□□ -0.25
ATG4D-204ENST00000586417 M0R2N4 97 aa13.5□□□□□ -0.25
ATG4D-204ENST00000586417 NBDYA0A0U1RRE5 68 aa13.49□□□□□ -0.25
ATG4D-204ENST00000586417 ZNF561-AS1K7EIQ3 104 aa13.49□□□□□ -0.25
ATG4D-204ENST00000586417 SND1-IT1Q9HBX3 110 aa13.49□□□□□ -0.25
ATG4D-204ENST00000586417 HYDINQ4G0P3 5121 aa13.49□□□□□ -0.25
ATG4D-204ENST00000586417 LOC107984156A0A0G2JMH3 177 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 H7C2G1 150 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 GTF2H5Q6ZYL4 71 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 ARL17AQ8IVW1 177 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 C6orf48Q9UBA6 75 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 DNAH6Q9C0G6 4158 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 RMI2Q96E14 147 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 C2orf48Q96LS8 159 aa13.48□□□□□ -0.25
ATG4D-204ENST00000586417 IGKV2-28A0A075B6P5 120 aa13.46□□□□□ -0.25
ATG4D-204ENST00000586417 IGKV2D-28P01615 120 aa13.46□□□□□ -0.25
ATG4D-204ENST00000586417 RPL13AP40429 203 aaKnown RBP13.46□□□□□ -0.25
ATG4D-204ENST00000586417 TTC32Q5I0X7 151 aa13.46□□□□□ -0.25
ATG4D-204ENST00000586417 CAMK2N2Q96S95 79 aa13.46□□□□□ -0.25
ATG4D-204ENST00000586417 SACSQ9NZJ4 4579 aa13.45□□□□□ -0.26
ATG4D-204ENST00000586417 TRBV30A0A0K0K1B3 111 aa13.44□□□□□ -0.26
ATG4D-204ENST00000586417 Q1RN00 199 aa13.44□□□□□ -0.26
ATG4D-204ENST00000586417 KMT2CQ8NEZ4 4911 aaKnown RBP13.44□□□□□ -0.26
ATG4D-204ENST00000586417 DNAH10Q8IVF4 4471 aa13.44□□□□□ -0.26
ATG4D-204ENST00000586417 LCE6AA0A183 80 aa13.43□□□□□ -0.26
ATG4D-204ENST00000586417 Q6ZR54 194 aa13.43□□□□□ -0.26
ATG4D-204ENST00000586417 Q6ZRU5 148 aa13.43□□□□□ -0.26
ATG4D-204ENST00000586417 LINC00337Q8N6G1 96 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms