RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 IFITM2Q01629 132 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 C2orf66Q6UXQ4 117 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 Q6ZN92 141 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 TMEM136Q6ZRR5 245 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 FAM19A3Q7Z5A8 133 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 Q8IZM0 81 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 PRELID3AQ96N28 172 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 LINC00167Q96N53 147 aa6.88□□□□□ -1.31
BRCA1-225ENST00000586385 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
BRCA1-225ENST00000586385 PRSS2P07478 247 aa6.87□□□□□ -1.31
BRCA1-225ENST00000586385 S100A1P23297 94 aa6.87□□□□□ -1.31
BRCA1-225ENST00000586385 CKS1BP61024 79 aa6.87□□□□□ -1.31
BRCA1-225ENST00000586385 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
BRCA1-225ENST00000586385 LOC389332A0A1B0GUA5 103 aa6.86□□□□□ -1.31
BRCA1-225ENST00000586385 S100A8P05109 93 aa6.86□□□□□ -1.31
BRCA1-225ENST00000586385 C6orf226Q5I0X4 101 aa6.86□□□□□ -1.31
BRCA1-225ENST00000586385 ALKBH7Q9BT30 221 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-225ENST00000586385 CDKN2A-AS1Q9UH64 79 aa6.86□□□□□ -1.31
BRCA1-225ENST00000586385 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
BRCA1-225ENST00000586385 F8VRH5 84 aa6.85□□□□□ -1.31
BRCA1-225ENST00000586385 C2orf88Q9BSF0 95 aa6.85□□□□□ -1.31
BRCA1-225ENST00000586385 CYSLTR1Q9Y271 337 aa6.85□□□□□ -1.31
BRCA1-225ENST00000586385 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
BRCA1-225ENST00000586385 Q8N8P6 123 aa6.84□□□□□ -1.31
BRCA1-225ENST00000586385 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
BRCA1-225ENST00000586385 VCX2Q9H322 139 aa6.84□□□□□ -1.31
BRCA1-225ENST00000586385 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
BRCA1-225ENST00000586385 SCO1O75880 301 aa6.83□□□□□ -1.32
BRCA1-225ENST00000586385 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
BRCA1-225ENST00000586385 ATP5L2Q7Z4Y8 100 aa6.83□□□□□ -1.32
BRCA1-225ENST00000586385 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
BRCA1-225ENST00000586385 SMIM1B2RUZ4 78 aa6.82□□□□□ -1.32
BRCA1-225ENST00000586385 NPSP0C0P6 89 aa6.82□□□□□ -1.32
BRCA1-225ENST00000586385 COMMD7Q86VX2 200 aa6.82□□□□□ -1.32
BRCA1-225ENST00000586385 MAP1LC3AQ9H492 121 aa6.82□□□□□ -1.32
BRCA1-225ENST00000586385 LAMTOR2Q9Y2Q5 125 aa6.82□□□□□ -1.32
BRCA1-225ENST00000586385 HERVK_113P63121 156 aa6.81□□□□□ -1.32
BRCA1-225ENST00000586385 PNRC1Q12796 327 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-225ENST00000586385 CXCL5P42830 114 aa6.8□□□□□ -1.32
BRCA1-225ENST00000586385 UBE2AP49459 152 aa6.8□□□□□ -1.32
BRCA1-225ENST00000586385 ORMDL2Q53FV1 153 aa6.79□□□□□ -1.32
BRCA1-225ENST00000586385 C3orf22Q8N5N4 141 aa6.79□□□□□ -1.32
BRCA1-225ENST00000586385 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
BRCA1-225ENST00000586385 IGKV2-28A0A075B6P5 120 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 IGKV2D-28P01615 120 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 PRLHP81277 87 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 SVBPQ8N300 66 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 COX7B2Q8TF08 81 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 TIMM17AQ99595 171 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 SEC11CQ9BY50 192 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
BRCA1-225ENST00000586385 GEMIN7Q9H840 131 aaKnown RBP6.78□□□□□ -1.32
BRCA1-225ENST00000586385 SNAPINO95295 136 aa6.77□□□□□ -1.33
BRCA1-225ENST00000586385 ADCYAP1P18509 176 aa6.77□□□□□ -1.33
BRCA1-225ENST00000586385 SEC11AP67812 179 aa6.77□□□□□ -1.33
BRCA1-225ENST00000586385 PDZD11Q5EBL8 140 aa6.77□□□□□ -1.33
BRCA1-225ENST00000586385 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-225ENST00000586385 Q8NDZ9 215 aa6.77□□□□□ -1.33
BRCA1-225ENST00000586385 TOMM6Q96B49 74 aa6.77□□□□□ -1.33
BRCA1-225ENST00000586385 IGKV2D-26A0A0A0MRZ7 120 aa6.76□□□□□ -1.33
BRCA1-225ENST00000586385 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
BRCA1-225ENST00000586385 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
BRCA1-225ENST00000586385 K7EMI3 77 aa6.76□□□□□ -1.33
BRCA1-225ENST00000586385 RAB5BP61020 215 aa6.76□□□□□ -1.33
BRCA1-225ENST00000586385 CTAG1AP78358 180 aa6.76□□□□□ -1.33
BRCA1-225ENST00000586385 VPREB1P12018 145 aa6.75□□□□□ -1.33
BRCA1-225ENST00000586385 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
BRCA1-225ENST00000586385 PLEKHB2Q96CS7 222 aa6.75□□□□□ -1.33
BRCA1-225ENST00000586385 NXT2Q9NPJ8 142 aaKnown RBP6.75□□□□□ -1.33
BRCA1-225ENST00000586385 TINCRA0A1B0GVN0 87 aa6.74□□□□□ -1.33
BRCA1-225ENST00000586385 M0R378 163 aa6.74□□□□□ -1.33
BRCA1-225ENST00000586385 SPINK8P0C7L1 97 aa6.74□□□□□ -1.33
BRCA1-225ENST00000586385 PAPPA-AS1Q5QFB9 102 aa6.74□□□□□ -1.33
BRCA1-225ENST00000586385 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
BRCA1-225ENST00000586385 ATP6V1G1O75348 118 aa6.73□□□□□ -1.33
BRCA1-225ENST00000586385 RHEBQ15382 184 aa6.73□□□□□ -1.33
BRCA1-225ENST00000586385 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
BRCA1-225ENST00000586385 ERASQ7Z444 233 aa6.73□□□□□ -1.33
BRCA1-225ENST00000586385 FAM19A1Q7Z5A9 133 aa6.73□□□□□ -1.33
BRCA1-225ENST00000586385 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
BRCA1-225ENST00000586385 SLC7A5P1Q8MH63 180 aa6.72□□□□□ -1.33
BRCA1-225ENST00000586385 SCGB3A1Q96QR1 104 aa6.72□□□□□ -1.33
BRCA1-225ENST00000586385 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
BRCA1-225ENST00000586385 MT-ND4LP03901 98 aa6.71□□□□□ -1.34
BRCA1-225ENST00000586385 KIAA1644Q3SXP7 199 aa6.71□□□□□ -1.34
BRCA1-225ENST00000586385 C10orf91Q5T1B1 145 aa6.71□□□□□ -1.34
BRCA1-225ENST00000586385 SND1-IT1Q9HBX3 110 aa6.71□□□□□ -1.34
BRCA1-225ENST00000586385 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
BRCA1-225ENST00000586385 APOC3P02656 99 aa6.7□□□□□ -1.34
BRCA1-225ENST00000586385 PFN2P35080 140 aa6.7□□□□□ -1.34
BRCA1-225ENST00000586385 FP248Q71RG6 208 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-225ENST00000586385 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
BRCA1-225ENST00000586385 IGLV5-39A0A0G2JS06 123 aa6.69□□□□□ -1.34
BRCA1-225ENST00000586385 LINC01546A6NGU7 62 aa6.69□□□□□ -1.34
BRCA1-225ENST00000586385 CBLN2Q8IUK8 224 aa6.69□□□□□ -1.34
BRCA1-225ENST00000586385 SPRR4Q96PI1 79 aa6.69□□□□□ -1.34
BRCA1-225ENST00000586385 ATP5LO75964 103 aa6.68□□□□□ -1.34
BRCA1-225ENST00000586385 S100PP25815 95 aa6.68□□□□□ -1.34
BRCA1-225ENST00000586385 G0S2P27469 103 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms