RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	CARD19	Q96LW7	228 aa		10.82	□□□□□ -0.68
TCF3-208	ENST00000586318	C2orf82	Q6UX34	121 aa		10.81	□□□□□ -0.68
TCF3-208	ENST00000586318	FUS	P35637	526 aa	Known RBP eCLIP	10.8	□□□□□ -0.68	6e-7	■■■□□ 16.7
TCF3-208	ENST00000586318	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.8	□□□□□ -0.68
TCF3-208	ENST00000586318	C9orf163	Q8N9P6	203 aa		10.8	□□□□□ -0.68
TCF3-208	ENST00000586318	RNF151	Q2KHN1	245 aa		10.79	□□□□□ -0.68
TCF3-208	ENST00000586318	C10orf25	Q5T742	122 aa		10.79	□□□□□ -0.68
TCF3-208	ENST00000586318	TRBV30	A0A0K0K1B3	111 aa		10.78	□□□□□ -0.68
TCF3-208	ENST00000586318		J3QQQ9	107 aa		10.78	□□□□□ -0.68
TCF3-208	ENST00000586318	TSPEAR-AS2	P59090	65 aa		10.78	□□□□□ -0.68
TCF3-208	ENST00000586318	SFTA2	Q6UW10	78 aa		10.78	□□□□□ -0.68
TCF3-208	ENST00000586318	C6orf48	Q9UBA6	75 aa		10.78	□□□□□ -0.68
TCF3-208	ENST00000586318	DNAH11	Q96DT5	4516 aa		10.77	□□□□□ -0.69
TCF3-208	ENST00000586318	HSBP1L1	C9JCN9	74 aa		10.77	□□□□□ -0.69
TCF3-208	ENST00000586318	LGALS3	P17931	250 aa	Known RBP	10.77	□□□□□ -0.69
TCF3-208	ENST00000586318	ANKRD39	Q53RE8	183 aa		10.77	□□□□□ -0.69
TCF3-208	ENST00000586318	PYY3	Q5JQD4	70 aa		10.77	□□□□□ -0.69
TCF3-208	ENST00000586318	ZNF625	Q96I27	306 aa	Predicted RBP	10.77	□□□□□ -0.69
TCF3-208	ENST00000586318	MAJIN	Q3KP22	176 aa		10.76	□□□□□ -0.69
TCF3-208	ENST00000586318	NDUFA12	Q9UI09	145 aa		10.76	□□□□□ -0.69
TCF3-208	ENST00000586318	IGKV2D-26	A0A0A0MRZ7	120 aa		10.75	□□□□□ -0.69
TCF3-208	ENST00000586318	GCSH	P23434	173 aa		10.75	□□□□□ -0.69
TCF3-208	ENST00000586318	NMU	P48645	174 aa		10.75	□□□□□ -0.69
TCF3-208	ENST00000586318	MYMX	A0A1B0GTQ4	84 aa		10.74	□□□□□ -0.69
TCF3-208	ENST00000586318	PKIG	Q9Y2B9	76 aa		10.74	□□□□□ -0.69
TCF3-208	ENST00000586318	PKD1	P98161	4303 aa		10.73	□□□□□ -0.69
TCF3-208	ENST00000586318	LOC105371267	A0A1B0GV96	52 aa		10.73	□□□□□ -0.69
TCF3-208	ENST00000586318	C16orf90	A8MZG2	172 aa		10.73	□□□□□ -0.69
TCF3-208	ENST00000586318	HERV-K104	P63124	156 aa		10.73	□□□□□ -0.69
TCF3-208	ENST00000586318	LINC01620	Q4KN68	170 aa		10.73	□□□□□ -0.69
TCF3-208	ENST00000586318	LOC107984640	A0A0U1RRK4	108 aa		10.72	□□□□□ -0.69
TCF3-208	ENST00000586318	TLX1NB	P0CAT3	122 aa		10.72	□□□□□ -0.69
TCF3-208	ENST00000586318	C9orf116	Q5BN46	136 aa	Predicted RBP	10.72	□□□□□ -0.69
TCF3-208	ENST00000586318	SDIM1	Q6ZPB5	146 aa		10.72	□□□□□ -0.69
TCF3-208	ENST00000586318	VAMP8	Q9BV40	100 aa		10.7	□□□□□ -0.7
TCF3-208	ENST00000586318	ERG28	Q9UKR5	140 aa		10.7	□□□□□ -0.7
TCF3-208	ENST00000586318	ZNF815P	A8K554	130 aa		10.69	□□□□□ -0.7
TCF3-208	ENST00000586318	NDUFC2-KCTD14	E9PQ53	114 aa		10.69	□□□□□ -0.7
TCF3-208	ENST00000586318	KRTAP10-1	P60331	282 aa		10.69	□□□□□ -0.7
TCF3-208	ENST00000586318	TTTY13	Q9BZ97	58 aa		10.69	□□□□□ -0.7
TCF3-208	ENST00000586318	DNAH5	Q8TE73	4624 aa		10.69	□□□□□ -0.7
TCF3-208	ENST00000586318	LINC00587	B1AMM8	73 aa		10.68	□□□□□ -0.7
TCF3-208	ENST00000586318	RPL18A	Q02543	176 aa	Known RBP	10.68	□□□□□ -0.7
TCF3-208	ENST00000586318	COX17	Q14061	63 aa		10.68	□□□□□ -0.7
TCF3-208	ENST00000586318	PAM16	Q9Y3D7	125 aa		10.68	□□□□□ -0.7
TCF3-208	ENST00000586318	SPATA45	Q537H7	98 aa		10.67	□□□□□ -0.7
TCF3-208	ENST00000586318	MEIG1	Q5JSS6	88 aa		10.67	□□□□□ -0.7
TCF3-208	ENST00000586318		Q6ZRP5	223 aa		10.67	□□□□□ -0.7
TCF3-208	ENST00000586318	PCP2	Q8IVA1	136 aa		10.67	□□□□□ -0.7
TCF3-208	ENST00000586318	HECTD4	Q9Y4D8	3996 aa		10.67	□□□□□ -0.7
TCF3-208	ENST00000586318		A0A096LNI7	61 aa		10.66	□□□□□ -0.7
TCF3-208	ENST00000586318		A0A0J9YXY3	114 aa		10.66	□□□□□ -0.7
TCF3-208	ENST00000586318	PFN2	P35080	140 aa		10.66	□□□□□ -0.7
TCF3-208	ENST00000586318	PTTG1IP	P53801	180 aa		10.66	□□□□□ -0.7
TCF3-208	ENST00000586318	SMIM6	P0DI80	62 aa		10.65	□□□□□ -0.7
TCF3-208	ENST00000586318	GAGE2B	Q13066	116 aa		10.65	□□□□□ -0.7
TCF3-208	ENST00000586318	SMIM13	P0DJ93	91 aa		10.64	□□□□□ -0.71
TCF3-208	ENST00000586318	LINC00158	P58513	81 aa		10.64	□□□□□ -0.71
TCF3-208	ENST00000586318	GAGE2E	Q4V326	116 aa		10.64	□□□□□ -0.71
TCF3-208	ENST00000586318		Q6ZSA8	131 aa		10.64	□□□□□ -0.71
TCF3-208	ENST00000586318	LINC00474	Q9P2X8	69 aa		10.64	□□□□□ -0.71
TCF3-208	ENST00000586318	GAGE2D	Q9UEU5	116 aa		10.64	□□□□□ -0.71
TCF3-208	ENST00000586318	IGKV2-24	A0A0C4DH68	120 aa		10.63	□□□□□ -0.71
TCF3-208	ENST00000586318	CHTF8	P0CG12	524 aa		10.63	□□□□□ -0.71
TCF3-208	ENST00000586318	COX8A	P10176	69 aa		10.63	□□□□□ -0.71
TCF3-208	ENST00000586318	S100A12	P80511	92 aa		10.63	□□□□□ -0.71
TCF3-208	ENST00000586318	CIRBP	Q14011	172 aa	Known RBP	10.63	□□□□□ -0.71
TCF3-208	ENST00000586318	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF3-208	ENST00000586318		A0A0U1RRA0	63 aa		10.62	□□□□□ -0.71
TCF3-208	ENST00000586318	TIMM17B	O60830	172 aa		10.62	□□□□□ -0.71
TCF3-208	ENST00000586318	SPACA4	Q8TDM5	124 aa		10.62	□□□□□ -0.71
TCF3-208	ENST00000586318	FAM30A	Q9NZY2	134 aa		10.62	□□□□□ -0.71
TCF3-208	ENST00000586318	DYNC1H1	Q14204	4646 aa	Known RBP	10.62	□□□□□ -0.71
TCF3-208	ENST00000586318	PANO1	I0J062	215 aa		10.61	□□□□□ -0.71
TCF3-208	ENST00000586318	SCGB1D4	Q6XE38	83 aa		10.61	□□□□□ -0.71
TCF3-208	ENST00000586318	BOD1L2	Q8IYS8	172 aa		10.61	□□□□□ -0.71
TCF3-208	ENST00000586318	PKHD1	P08F94	4074 aa		10.61	□□□□□ -0.71
TCF3-208	ENST00000586318	DLEU1	O43261	78 aa		10.6	□□□□□ -0.71
TCF3-208	ENST00000586318	MIR7-3HG	Q8N6C7	128 aa		10.6	□□□□□ -0.71
TCF3-208	ENST00000586318	C9orf129	Q5T035	196 aa	Known RBP	10.59	□□□□□ -0.71
TCF3-208	ENST00000586318	C14orf144	Q96I85	54 aa		10.59	□□□□□ -0.71
TCF3-208	ENST00000586318	LITAF	Q99732	161 aa		10.59	□□□□□ -0.71
TCF3-208	ENST00000586318	SND1-IT1	Q9HBX3	110 aa		10.59	□□□□□ -0.71
TCF3-208	ENST00000586318	XAGE1A	Q9HD64	81 aa		10.59	□□□□□ -0.71
TCF3-208	ENST00000586318	LRP1B	Q9NZR2	4599 aa		10.57	□□□□□ -0.72
TCF3-208	ENST00000586318	TMEM238	C9JI98	176 aa		10.57	□□□□□ -0.72
TCF3-208	ENST00000586318	ADAMTSL4-AS1	Q5T5F5	129 aa		10.57	□□□□□ -0.72
TCF3-208	ENST00000586318	SLC25A34	Q6PIV7	304 aa		10.57	□□□□□ -0.72
TCF3-208	ENST00000586318	DPH3	Q96FX2	82 aa		10.57	□□□□□ -0.72
TCF3-208	ENST00000586318	DAND5	Q8N907	189 aa		10.56	□□□□□ -0.72
TCF3-208	ENST00000586318	TP73-AS1	Q9UF72	201 aa		10.56	□□□□□ -0.72
TCF3-208	ENST00000586318	DNAH8	Q96JB1	4490 aa		10.55	□□□□□ -0.72
TCF3-208	ENST00000586318		A0A087WYN8	130 aa		10.55	□□□□□ -0.72
TCF3-208	ENST00000586318	PLAC8	Q9NZF1	115 aa		10.55	□□□□□ -0.72
TCF3-208	ENST00000586318	EPPK1	P58107	5090 aa	Known RBP	10.54	□□□□□ -0.72
TCF3-208	ENST00000586318	LOC107984156	A0A0G2JMH3	177 aa		10.54	□□□□□ -0.72
TCF3-208	ENST00000586318	SCX	Q7RTU7	201 aa		10.54	□□□□□ -0.72
TCF3-208	ENST00000586318	ARL17A	Q8IVW1	177 aa		10.54	□□□□□ -0.72
TCF3-208	ENST00000586318	CIRBP-AS1	Q8TBR5	109 aa		10.54	□□□□□ -0.72
TCF3-208	ENST00000586318	SPANXD	Q9BXN6	97 aa		10.54	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 101 ms