RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 F8WDY8 70 aa7.8□□□□□ -1.16
SS18-225ENST00000585121 Q6ZN92 141 aa7.8□□□□□ -1.16
SS18-225ENST00000585121 FAM104AQ969W3 186 aa7.8□□□□□ -1.16
SS18-225ENST00000585121 C2orf88Q9BSF0 95 aa7.8□□□□□ -1.16
SS18-225ENST00000585121 IGLV4-3A0A075B6K6 122 aa7.79□□□□□ -1.16
SS18-225ENST00000585121 IGHV3OR16-9A0A0B4J2B5 98 aa7.79□□□□□ -1.16
SS18-225ENST00000585121 HNRNPA3P51991 378 aaKnown RBP7.79□□□□□ -1.16
SS18-225ENST00000585121 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
SS18-225ENST00000585121 PYY3Q5JQD4 70 aa7.79□□□□□ -1.16
SS18-225ENST00000585121 TEX43Q6ZNM6 134 aa7.79□□□□□ -1.16
SS18-225ENST00000585121 LINC00518Q8N0U6 118 aa7.79□□□□□ -1.16
SS18-225ENST00000585121 MAP1LC3CQ9BXW4 147 aa7.79□□□□□ -1.16
SS18-225ENST00000585121 C3orf79P0CE67 100 aa7.78□□□□□ -1.16
SS18-225ENST00000585121 RNF151Q2KHN1 245 aa7.78□□□□□ -1.16
SS18-225ENST00000585121 C2orf66Q6UXQ4 117 aa7.78□□□□□ -1.16
SS18-225ENST00000585121 VCX2Q9H322 139 aa7.78□□□□□ -1.16
SS18-225ENST00000585121 NDUFA1O15239 70 aa7.78□□□□□ -1.16
SS18-225ENST00000585121 KRTDAPP60985 99 aa7.78□□□□□ -1.16
SS18-225ENST00000585121 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
SS18-225ENST00000585121 ATP5LO75964 103 aa7.77□□□□□ -1.17
SS18-225ENST00000585121 SCGB1D1O95968 90 aa7.77□□□□□ -1.17
SS18-225ENST00000585121 NPSP0C0P6 89 aa7.77□□□□□ -1.17
SS18-225ENST00000585121 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.17
SS18-225ENST00000585121 PET117Q6UWS5 81 aa7.77□□□□□ -1.17
SS18-225ENST00000585121 TOMM6Q96B49 74 aa7.77□□□□□ -1.17
SS18-225ENST00000585121 MRPL35Q9NZE8 188 aaKnown RBP7.77□□□□□ -1.17
SS18-225ENST00000585121 A0A087WZ39 114 aa7.76□□□□□ -1.17
SS18-225ENST00000585121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
SS18-225ENST00000585121 SYS1-DBNDD2H3BUS1 97 aa7.76□□□□□ -1.17
SS18-225ENST00000585121 PRR3P79522 188 aaKnown RBP7.76□□□□□ -1.17
SS18-225ENST00000585121 LINC00242Q5T6M2 205 aa7.76□□□□□ -1.17
SS18-225ENST00000585121 SERTAD4-AS1Q5TG53 156 aa7.76□□□□□ -1.17
SS18-225ENST00000585121 C12orf57Q99622 126 aa7.76□□□□□ -1.17
SS18-225ENST00000585121 A0A0J9YXV3 536 aa7.75□□□□□ -1.17
SS18-225ENST00000585121 UBE2D1P51668 147 aa7.75□□□□□ -1.17
SS18-225ENST00000585121 LINC00173Q6ZV60 143 aa7.75□□□□□ -1.17
SS18-225ENST00000585121 IFI27L1Q96BM0 104 aa7.75□□□□□ -1.17
SS18-225ENST00000585121 C20orf202A1L168 122 aa7.74□□□□□ -1.17
SS18-225ENST00000585121 Q6ZRP5 223 aa7.74□□□□□ -1.17
SS18-225ENST00000585121 ERASQ7Z444 233 aa7.74□□□□□ -1.17
SS18-225ENST00000585121 LINC01561Q8N1V8 128 aa7.74□□□□□ -1.17
SS18-225ENST00000585121 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
SS18-225ENST00000585121 SCGB3A1Q96QR1 104 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 AMELXQ99217 191 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 A0A1W2PNN7 141 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 IGIPA6NJ69 53 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 PRSS2P07478 247 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 SEC11AP67812 179 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 S100A12P80511 92 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 TIMM17AQ99595 171 aa7.73□□□□□ -1.17
SS18-225ENST00000585121 HERVK_113P63121 156 aa7.72□□□□□ -1.17
SS18-225ENST00000585121 C10orf25Q5T742 122 aa7.72□□□□□ -1.17
SS18-225ENST00000585121 ZC2HC1BQ5TFG8 222 aa7.72□□□□□ -1.17
SS18-225ENST00000585121 LINC01545Q5VT33 79 aa7.72□□□□□ -1.17
SS18-225ENST00000585121 TRBV30A0A0K0K1B3 111 aa7.71□□□□□ -1.18
SS18-225ENST00000585121 TLX1NBP0CAT3 122 aa7.71□□□□□ -1.18
SS18-225ENST00000585121 GEMIN7Q9H840 131 aaKnown RBP7.71□□□□□ -1.18
SS18-225ENST00000585121 C6orf48Q9UBA6 75 aa7.71□□□□□ -1.18
SS18-225ENST00000585121 TRAV12-1A0A0B4J245 112 aa7.7□□□□□ -1.18
SS18-225ENST00000585121 KIAA0087Q14695 138 aa7.7□□□□□ -1.18
SS18-225ENST00000585121 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
SS18-225ENST00000585121 TOMM7Q9P0U1 55 aa7.7□□□□□ -1.18
SS18-225ENST00000585121 CKS1BP61024 79 aa7.69□□□□□ -1.18
SS18-225ENST00000585121 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
SS18-225ENST00000585121 C6orf226Q5I0X4 101 aa7.69□□□□□ -1.18
SS18-225ENST00000585121 REG3GQ6UW15 175 aa7.69□□□□□ -1.18
SS18-225ENST00000585121 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
SS18-225ENST00000585121 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
SS18-225ENST00000585121 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
SS18-225ENST00000585121 H0Y8G0 127 aa7.68□□□□□ -1.18
SS18-225ENST00000585121 ODF1Q14990 250 aa7.68□□□□□ -1.18
SS18-225ENST00000585121 PMVKQ15126 192 aa7.68□□□□□ -1.18
SS18-225ENST00000585121 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
SS18-225ENST00000585121 Q8IZM0 81 aa7.68□□□□□ -1.18
SS18-225ENST00000585121 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
SS18-225ENST00000585121 VAMP8Q9BV40 100 aa7.67□□□□□ -1.18
SS18-225ENST00000585121 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
SS18-225ENST00000585121 FAM19A5Q7Z5A7 132 aaPredicted RBP7.66□□□□□ -1.18
SS18-225ENST00000585121 LINC00469Q8N7U9 141 aa7.66□□□□□ -1.18
SS18-225ENST00000585121 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
SS18-225ENST00000585121 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
SS18-225ENST00000585121 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
SS18-225ENST00000585121 HMCN2Q8NDA2 5059 aa7.65□□□□□ -1.18
SS18-225ENST00000585121 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
SS18-225ENST00000585121 F8VRH5 84 aa7.65□□□□□ -1.18
SS18-225ENST00000585121 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
SS18-225ENST00000585121 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
SS18-225ENST00000585121 LINC01600Q96MT4 127 aa7.65□□□□□ -1.18
SS18-225ENST00000585121 CST9LQ9H4G1 147 aa7.65□□□□□ -1.18
SS18-225ENST00000585121 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
SS18-225ENST00000585121 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
SS18-225ENST00000585121 HSBP1L1C9JCN9 74 aa7.64□□□□□ -1.19
SS18-225ENST00000585121 DPM2O94777 84 aa7.64□□□□□ -1.19
SS18-225ENST00000585121 IGKCP01834 107 aa7.64□□□□□ -1.19
SS18-225ENST00000585121 PLNP26678 52 aa7.64□□□□□ -1.19
SS18-225ENST00000585121 TNXBP22105 4242 aa7.64□□□□□ -1.19
SS18-225ENST00000585121 CXCL5P42830 114 aa7.63□□□□□ -1.19
SS18-225ENST00000585121 UBE2BP63146 152 aa7.63□□□□□ -1.19
SS18-225ENST00000585121 ATOH7Q8N100 152 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms