RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 STPG4Q8N801 248 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 SPACA4Q8TDM5 124 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 RPL36ALQ969Q0 106 aaKnown RBP4.78□□□□□ -1.64
CCDC47-205ENST00000582331 TP73-AS1Q9UF72 201 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 TRAV12-1A0A0B4J245 112 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 TRBV10-1A0A0K0K1A3 114 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 TRBV27A0A0K0K1C4 114 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 A0A0U1RQV1 116 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 SDHAF1A6NFY7 115 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 FGF6P10767 208 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 UBE2D3P61077 147 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 UBE2D2P62837 147 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 PRR3P79522 188 aaKnown RBP4.77□□□□□ -1.65
CCDC47-205ENST00000582331 ZNF56Q15929 161 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 FAM74A4Q5TZK3 123 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 C2orf66Q6UXQ4 117 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 SCGB3A1Q96QR1 104 aa4.77□□□□□ -1.65
CCDC47-205ENST00000582331 TRBV7-3A0A075B6L6 115 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 IGIPA6NJ69 53 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.76□□□□□ -1.65
CCDC47-205ENST00000582331 DPM2O94777 84 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 TSHBP01222 138 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 C2orf91Q6ZV80 131 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 ERASQ7Z444 233 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 BOD1L2Q8IYS8 172 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 NEXN-AS1Q8NBZ9 246 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 CHCHD5Q9BSY4 110 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
CCDC47-205ENST00000582331 MRPL35Q9NZE8 188 aaKnown RBP4.76□□□□□ -1.65
CCDC47-205ENST00000582331 LINC01549A6NIU2 74 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 H7C1H1 209 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 DLEU1O43261 78 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 IGKCP01834 107 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 SLPIP03973 132 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 G0S2P27469 103 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 CLPSL2Q6UWE3 100 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 LINC00269Q8N2A0 174 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 KIR2DL4Q99706 377 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 CYSLTR1Q9Y271 337 aa4.75□□□□□ -1.65
CCDC47-205ENST00000582331 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
CCDC47-205ENST00000582331 F8VRH5 84 aa4.74□□□□□ -1.65
CCDC47-205ENST00000582331 I3L3M4 83 aa4.74□□□□□ -1.65
CCDC47-205ENST00000582331 HINT1P49773 126 aaPredicted RBP4.74□□□□□ -1.65
CCDC47-205ENST00000582331 RBX1P62877 108 aa4.74□□□□□ -1.65
CCDC47-205ENST00000582331 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
CCDC47-205ENST00000582331 C20orf203Q8NBC4 194 aa4.74□□□□□ -1.65
CCDC47-205ENST00000582331 TMEM141Q96I45 108 aa4.74□□□□□ -1.65
CCDC47-205ENST00000582331 TIMM17AQ99595 171 aa4.74□□□□□ -1.65
CCDC47-205ENST00000582331 CHTOPQ9Y3Y2 248 aaKnown RBP4.74□□□□□ -1.65
CCDC47-205ENST00000582331 IGLV10-54A0A075B6I4 117 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
CCDC47-205ENST00000582331 COX6A2Q02221 97 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 GAGE6Q13070 117 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 BATFQ16520 125 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 COL5A1-AS1Q5SY13 56 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 ZC2HC1BQ5TFG8 222 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 MUC2Q02817 5179 aa4.73□□□□□ -1.65
CCDC47-205ENST00000582331 IGLV4-69A0A075B6H9 119 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 TRAV8-4A0A0B4J246 113 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 IGKV2-24A0A0C4DH68 120 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 PLNP26678 52 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 REG3AQ06141 175 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 TMEM97Q5BJF2 176 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 BVES-AS1Q5T3Y7 98 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 NTM-AS1Q6ZSK4 140 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 FAM104AQ969W3 186 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 TTTY13Q9BZ97 58 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 CST9LQ9H4G1 147 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
CCDC47-205ENST00000582331 NMUP48645 174 aa4.71□□□□□ -1.66
CCDC47-205ENST00000582331 PMVKQ15126 192 aa4.71□□□□□ -1.66
CCDC47-205ENST00000582331 Q6ZRP5 223 aa4.71□□□□□ -1.66
CCDC47-205ENST00000582331 OPRPNQ99935 248 aaPredicted RBP4.71□□□□□ -1.66
CCDC47-205ENST00000582331 HIGD1BQ9P298 99 aa4.71□□□□□ -1.66
CCDC47-205ENST00000582331 PYGO1Q9Y3Y4 419 aa4.71□□□□□ -1.66
CCDC47-205ENST00000582331 TRBV25-1A0A075B6N4 114 aa4.7□□□□□ -1.66
CCDC47-205ENST00000582331 C11orf86A6NJI1 115 aa4.7□□□□□ -1.66
CCDC47-205ENST00000582331 CFAP161Q6P656 301 aa4.7□□□□□ -1.66
CCDC47-205ENST00000582331 IGLV4-3A0A075B6K6 122 aa4.69□□□□□ -1.66
CCDC47-205ENST00000582331 E9PLD3 99 aa4.69□□□□□ -1.66
CCDC47-205ENST00000582331 NPSP0C0P6 89 aa4.69□□□□□ -1.66
CCDC47-205ENST00000582331 HSD52Q0P140 79 aa4.69□□□□□ -1.66
CCDC47-205ENST00000582331 PAPPA-AS1Q5QFB9 102 aa4.69□□□□□ -1.66
CCDC47-205ENST00000582331 AMELXQ99217 191 aa4.69□□□□□ -1.66
CCDC47-205ENST00000582331 A0A096LNI7 61 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 TAX1BP3O14907 124 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 ZNF25P17030 456 aaPredicted RBP4.68□□□□□ -1.66
CCDC47-205ENST00000582331 RNF151Q2KHN1 245 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 Q6ZVH6 145 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 C15orf56Q8N910 161 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 ORAOV1Q8WV07 137 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 LINC00474Q9P2X8 69 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 PSORS1C2Q9UIG4 136 aa4.68□□□□□ -1.66
CCDC47-205ENST00000582331 IGLV4-60A0A075B6I1 120 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 A0A1B0GUV1 79 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 SEC11AP67812 179 aa4.67□□□□□ -1.66
CCDC47-205ENST00000582331 COTL1Q14019 142 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms